BDGP Sequence Production Resources |
Search the DGRC for GH26270
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 262 |
Well: | 70 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6439-RA |
Protein status: | GH26270.pep: gold |
Preliminary Size: | 1650 |
Sequenced Size: | 1615 |
Gene | Date | Evidence |
---|---|---|
CG6439 | 2001-01-01 | Release 2 assignment |
CG6439 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6439 | 2003-02-22 | Blastp of sequenced clone |
CG6439 | 2008-04-29 | Release 5.5 accounting |
CG6439 | 2008-08-15 | Release 5.9 accounting |
CG6439 | 2008-12-18 | 5.12 accounting |
1615 bp (1615 high quality bases) assembled on 2003-02-22
GenBank Submission: BT004877
> GH26270.complete AAACAGGTTACTATGCGGTTGCCGCCAAATTTATTCCTTAAATAATCGTA TATGTTCGTTACTAATTTTCGAACGCCAAAATCGCGATAGTTGGTCGTTA GCCAGCACTGGACGCGCCAGTTTCGTGGGCGGCTATCGCCAGCCCTGGTA GTCAGAGGCAATCAGCTGGTTTGCGTGGTCGATTTGGTCCTATTGAAATT TTTCGGTTTGGCACCGGAGCAAAAATCACATCGCAATCAAAAATTTCGCG TGGCCAAAGGACACACTTTTGAGTTTGGATCAACAGCCGGGAAGATCTAG CTAACCGAATAGCAAAATGTCGATGCTGGCGAGAACAGTTGGACGGACGT TCATGCAGGCTGCGGCAGCACGTAGTCTGCACACCACGTCGACGCTACGG GCTACGGATAACTACGGCGCCAACAGGACCACCTGCACACTGATTCCCGG CGACGGTGTGGGTCCCGAGCTGGTCTACTCCCTCCAGGAGGTCTTCAAGG CAGCCAGCGTTCCCGTGGACTTCGAGTGCTACTTCCTTTCCGAAATCAAT CCCGTGCTTAGTGCCAAACTGGAGGATGTGGTGGCATCCATTCAGAAAAA CAAAGTGTGCATTAAGGGCGTTTTGGCCACACCCGACTACAGCAATGTGG GTGACCTGCAGACCCTTAACATGAAGCTTCGCAACGACCTGGACCTCTAC GCCAATGTGGTGCATGTGCGCAGCTTGCCCGGTGTCAAGACCCGCCACAC CAACATCGACACGGTGATTATTCGCGAGCAGACGGAGGGCGAGTATTCGG CGTTGGAGCACGAGTCGGTGCCCGGCATTGTGGAGTGCCTGAAGATTATC ACCGCCAAAAAGTCCATGCGCATTGCCAAGTTCGCCTTCGACTATGCGAC GAAGAATCAGCGCAAGAAGGTCACCGCCGTGCACAAGGCGAATATCATGA AGTTGGGCGACGGTCTCTTCCTACGCTCCTGCGAAGAGGTTTCCCGGCTC TATCCGCGCATCCAGTTTGAGAAGATGATCGTGGACAACACGACCATGCA GATGGTTTCCAATCCCAACCAGTTCGACGTGATGGTCACCCCCAATCTCT ATGGTGCCATTGTGGACAATCTGGCCAGTGGTCTCGTGGGCGGTGCTGGT GTCGTTGCTGGTGCCTCCTACTCCTCGGAATCCGTCGTCTTTGAGCCGGG TGCACGTCACACCTTCGCCGAGGCCGTGGGCAAGAACGTGGCTAATCCCA CTGCCATGCTGCTCTGCGGCGTGAAGCTGTTGCGCCACATCAACCTGCCC ACCTACGGCGAGATCATCCAGAATGCCATCAACAAGGTGCTGAACGATGG CAAGGTGCGTACTAAGGATCTGGGCGGACAATCGACCACGCAGGACTTTA CCCGCGCCATCATCCTGAACATGTCCTAGATGGGCACCACTGTCATCGCC GGCATCGCGATCAGCAAGTCTACAACATCATGGGCAACAACGTTGGCGCT TATATAATCGACATTAGACAGTTTCTGTTGTTGCCACAGCTAAATTTTGA ATTGTTGAAAGAAACACCTTGAAAGTTCTTAGTTATCCTATTAAAACAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 17841106..17841707 | 1199..598 | 2905 | 98.8 | Minus |
chr3R | 27901430 | chr3R | 17840590..17840985 | 1593..1198 | 1950 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 17842756..17843114 | 359..1 | 1735 | 98.9 | Minus |
chr3R | 27901430 | chr3R | 17841745..17841864 | 617..498 | 525 | 95.8 | Minus |
chr3R | 27901430 | chr3R | 17842387..17842473 | 504..418 | 420 | 98.9 | Minus |
chr3R | 27901430 | chr3R | 17842544..17842594 | 407..357 | 255 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 22017340..22017941 | 1199..598 | 2935 | 99.2 | Minus |
3R | 32079331 | 3R | 22016824..22017219 | 1593..1198 | 1980 | 100 | Minus |
3R | 32079331 | 3R | 22018991..22019349 | 359..1 | 1795 | 100 | Minus |
3R | 32079331 | 3R | 22017979..22018098 | 617..498 | 600 | 100 | Minus |
3R | 32079331 | 3R | 22018619..22018717 | 504..406 | 480 | 99 | Minus |
3R | 32079331 | 3R | 22018779..22018829 | 407..357 | 255 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 21758171..21758772 | 1199..598 | 2935 | 99.1 | Minus |
3R | 31820162 | 3R | 21757655..21758050 | 1593..1198 | 1980 | 100 | Minus |
3R | 31820162 | 3R | 21759822..21760180 | 359..1 | 1795 | 100 | Minus |
3R | 31820162 | 3R | 21758810..21758929 | 617..498 | 600 | 100 | Minus |
3R | 31820162 | 3R | 21759450..21759548 | 504..406 | 480 | 98.9 | Minus |
3R | 31820162 | 3R | 21759610..21759660 | 407..357 | 255 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 17840586..17840984 | 1199..1597 | 98 | <- | Minus |
chr3R | 17841107..17841688 | 617..1198 | 99 | <- | Minus |
chr3R | 17841746..17841862 | 500..616 | 95 | <- | Minus |
chr3R | 17842392..17842481 | 407..499 | 96 | <- | Minus |
chr3R | 17842545..17842592 | 359..406 | 100 | <- | Minus |
chr3R | 17842757..17843114 | 1..358 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6439-RA | 1..1113 | 317..1429 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6439-RB | 1..1113 | 317..1429 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6439-RA | 1..1113 | 317..1429 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6439-RA | 1..1113 | 317..1429 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6439-RA | 1..1113 | 317..1429 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6439-RA | 34..1627 | 1..1597 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6439-RA | 34..1627 | 1..1597 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6439-RB | 34..1625 | 1..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6439-RA | 34..1627 | 1..1597 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6439-RB | 34..1625 | 1..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22016820..22017218 | 1199..1597 | 99 | <- | Minus |
3R | 22017341..22017922 | 617..1198 | 100 | <- | Minus |
3R | 22017980..22018096 | 500..616 | 100 | <- | Minus |
3R | 22018624..22018716 | 407..499 | 100 | <- | Minus |
3R | 22018780..22018827 | 359..406 | 100 | <- | Minus |
3R | 22018992..22019349 | 1..358 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22016820..22017218 | 1199..1597 | 99 | <- | Minus |
3R | 22017341..22017922 | 617..1198 | 100 | <- | Minus |
3R | 22017980..22018096 | 500..616 | 100 | <- | Minus |
3R | 22018624..22018716 | 407..499 | 100 | <- | Minus |
3R | 22018780..22018827 | 359..406 | 100 | <- | Minus |
3R | 22018992..22019349 | 1..358 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22016820..22017218 | 1199..1597 | 99 | <- | Minus |
3R | 22017341..22017922 | 617..1198 | 100 | <- | Minus |
3R | 22017980..22018096 | 500..616 | 100 | <- | Minus |
3R | 22018624..22018716 | 407..499 | 100 | <- | Minus |
3R | 22018780..22018827 | 359..406 | 100 | <- | Minus |
3R | 22018992..22019349 | 1..358 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 17842542..17842940 | 1199..1597 | 99 | <- | Minus |
arm_3R | 17843063..17843644 | 617..1198 | 100 | <- | Minus |
arm_3R | 17843702..17843818 | 500..616 | 100 | <- | Minus |
arm_3R | 17844346..17844438 | 407..499 | 100 | <- | Minus |
arm_3R | 17844502..17844549 | 359..406 | 100 | <- | Minus |
arm_3R | 17844714..17845071 | 1..358 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21757651..21758049 | 1199..1597 | 99 | <- | Minus |
3R | 21758172..21758753 | 617..1198 | 100 | <- | Minus |
3R | 21758811..21758927 | 500..616 | 100 | <- | Minus |
3R | 21759455..21759547 | 407..499 | 100 | <- | Minus |
3R | 21759611..21759658 | 359..406 | 100 | <- | Minus |
3R | 21759823..21760180 | 1..358 | 100 | Minus |
Translation from 316 to 1428
> GH26270.pep MSMLARTVGRTFMQAAAARSLHTTSTLRATDNYGANRTTCTLIPGDGVGP ELVYSLQEVFKAASVPVDFECYFLSEINPVLSAKLEDVVASIQKNKVCIK GVLATPDYSNVGDLQTLNMKLRNDLDLYANVVHVRSLPGVKTRHTNIDTV IIREQTEGEYSALEHESVPGIVECLKIITAKKSMRIAKFAFDYATKNQRK KVTAVHKANIMKLGDGLFLRSCEEVSRLYPRIQFEKMIVDNTTMQMVSNP NQFDVMVTPNLYGAIVDNLASGLVGGAGVVAGASYSSESVVFEPGARHTF AEAVGKNVANPTAMLLCGVKLLRHINLPTYGEIIQNAINKVLNDGKVRTK DLGGQSTTQDFTRAIILNMS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16953-PA | 371 | GF16953-PA | 1..371 | 1..370 | 1798 | 93.3 | Plus |
Dana\GF16768-PA | 402 | GF16768-PA | 35..383 | 22..366 | 813 | 44.5 | Plus |
Dana\GF20487-PA | 377 | GF20487-PA | 35..373 | 25..365 | 739 | 42.9 | Plus |
Dana\GF22695-PA | 255 | GF22695-PA | 1..236 | 131..366 | 656 | 48.3 | Plus |
Dana\GF13612-PA | 412 | GF13612-PA | 89..403 | 41..365 | 556 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12546-PA | 370 | GG12546-PA | 1..370 | 1..370 | 1976 | 100 | Plus |
Dere\GG11421-PA | 402 | GG11421-PA | 35..383 | 22..366 | 814 | 44.5 | Plus |
Dere\GG18052-PA | 377 | GG18052-PA | 32..373 | 22..365 | 742 | 42.6 | Plus |
Dere\GG22965-PA | 395 | GG22965-PA | 66..387 | 34..365 | 549 | 34.6 | Plus |
Dere\GG22281-PA | 378 | GG22281-PA | 123..361 | 119..359 | 273 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19869-PA | 370 | GH19869-PA | 1..369 | 1..369 | 1731 | 88.9 | Plus |
Dgri\GH18988-PA | 402 | GH18988-PA | 34..383 | 21..366 | 793 | 43.5 | Plus |
Dgri\GH17867-PA | 354 | GH17867-PA | 2..350 | 17..365 | 739 | 42.3 | Plus |
Dgri\GH16376-PA | 361 | GH16376-PA | 14..349 | 33..370 | 736 | 43.7 | Plus |
Dgri\GH20895-PA | 386 | GH20895-PA | 64..384 | 41..369 | 566 | 38.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Idh3b-PB | 370 | CG6439-PB | 1..370 | 1..370 | 1874 | 100 | Plus |
Idh3b-PA | 370 | CG6439-PA | 1..370 | 1..370 | 1874 | 100 | Plus |
CG5028-PC | 392 | CG5028-PC | 35..387 | 22..370 | 791 | 43.7 | Plus |
CG5028-PD | 393 | CG5028-PD | 35..387 | 22..370 | 791 | 43.7 | Plus |
CG5028-PB | 402 | CG5028-PB | 35..387 | 22..370 | 791 | 43.7 | Plus |
CG5028-PA | 402 | CG5028-PA | 35..387 | 22..370 | 791 | 43.7 | Plus |
l(1)G0156-PC | 354 | CG12233-PC | 12..350 | 25..365 | 726 | 42.9 | Plus |
l(1)G0156-PA | 354 | CG12233-PA | 12..350 | 25..365 | 726 | 42.9 | Plus |
l(1)G0156-PD | 377 | CG12233-PD | 35..373 | 25..365 | 726 | 42.9 | Plus |
CG32026-PA | 719 | CG32026-PA | 386..718 | 41..369 | 631 | 38.7 | Plus |
CG3483-PA | 391 | CG3483-PA | 57..387 | 18..365 | 506 | 33.9 | Plus |
CG7755-PA | 378 | CG7755-PA | 10..359 | 2..357 | 288 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22037-PA | 370 | GI22037-PA | 1..369 | 1..369 | 1697 | 86.2 | Plus |
Dmoj\GI22415-PA | 402 | GI22415-PA | 35..383 | 22..366 | 793 | 43.4 | Plus |
Dmoj\GI16435-PA | 377 | GI16435-PA | 25..373 | 15..365 | 748 | 42.6 | Plus |
Dmoj\GI11568-PA | 354 | GI11568-PA | 1..354 | 3..369 | 735 | 40.6 | Plus |
Dmoj\GI18905-PA | 399 | GI18905-PA | 79..390 | 41..365 | 581 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23725-PA | 378 | GL23725-PA | 1..377 | 1..369 | 1741 | 88.9 | Plus |
Dper\GL21529-PA | 402 | GL21529-PA | 35..383 | 22..366 | 804 | 44.2 | Plus |
Dper\GL14780-PA | 351 | GL14780-PA | 23..347 | 15..365 | 627 | 38.7 | Plus |
Dper\GL20101-PA | 411 | GL20101-PA | 85..404 | 36..365 | 565 | 36.3 | Plus |
Dper\GL11354-PA | 395 | GL11354-PA | 134..373 | 118..359 | 306 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19594-PA | 378 | GA19594-PA | 1..377 | 1..369 | 1741 | 88.9 | Plus |
Dpse\GA18606-PA | 402 | GA18606-PA | 35..383 | 22..366 | 804 | 44.2 | Plus |
Dpse\GA11495-PA | 373 | GA11495-PA | 23..369 | 15..365 | 740 | 42.3 | Plus |
Dpse\GA16620-PA | 332 | GA16620-PA | 1..331 | 43..369 | 668 | 39.2 | Plus |
Dpse\GA17474-PA | 411 | GA17474-PA | 85..404 | 36..365 | 566 | 36.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23677-PA | 370 | GM23677-PA | 1..370 | 1..370 | 1973 | 99.7 | Plus |
Dsec\GM10262-PA | 321 | GM10262-PA | 4..311 | 56..366 | 753 | 44.3 | Plus |
Dsec\GM22739-PA | 377 | GM22739-PA | 32..373 | 22..365 | 743 | 42.6 | Plus |
Dsec\GM11859-PA | 389 | GM11859-PA | 52..385 | 15..365 | 523 | 34 | Plus |
Dsec\GM20069-PA | 378 | GM20069-PA | 123..361 | 119..359 | 265 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18486-PA | 370 | GD18486-PA | 1..370 | 1..370 | 1973 | 99.7 | Plus |
Dsim\GD21232-PA | 392 | GD21232-PA | 36..382 | 14..366 | 815 | 43.9 | Plus |
Dsim\GD15579-PA | 377 | GD15579-PA | 32..373 | 22..365 | 743 | 42.6 | Plus |
Dsim\GD14133-PA | 722 | GD14133-PA | 389..721 | 41..369 | 641 | 39 | Plus |
Dsim\GD11857-PA | 388 | GD11857-PA | 52..384 | 15..365 | 483 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24090-PA | 371 | GJ24090-PA | 1..370 | 1..369 | 1697 | 87.3 | Plus |
Dvir\GJ10975-PA | 402 | GJ10975-PA | 35..383 | 22..366 | 800 | 44.2 | Plus |
Dvir\GJ11248-PA | 367 | GJ11248-PA | 2..354 | 8..369 | 772 | 44.3 | Plus |
Dvir\GJ20729-PA | 426 | GJ20729-PA | 80..417 | 18..365 | 600 | 38.9 | Plus |
Dvir\GJ15838-PA | 258 | GJ15838-PA | 29..227 | 15..214 | 414 | 43.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13007-PA | 370 | GK13007-PA | 1..369 | 1..369 | 1763 | 91.1 | Plus |
Dwil\GK12856-PA | 402 | GK12856-PA | 35..383 | 22..366 | 803 | 44.2 | Plus |
Dwil\GK25509-PA | 379 | GK25509-PA | 27..375 | 15..365 | 728 | 41.5 | Plus |
Dwil\GK19462-PA | 390 | GK19462-PA | 1..307 | 52..361 | 523 | 36.9 | Plus |
Dwil\GK19318-PA | 388 | GK19318-PA | 130..376 | 119..368 | 311 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24066-PA | 370 | GE24066-PA | 1..370 | 1..370 | 1968 | 99.5 | Plus |
Dyak\GE23616-PA | 402 | GE23616-PA | 35..383 | 22..366 | 809 | 43.9 | Plus |
Dyak\GE14404-PA | 393 | GE14404-PA | 64..385 | 34..365 | 547 | 35.9 | Plus |
Dyak\GE17383-PA | 268 | GE17383-PA | 112..264 | 212..365 | 329 | 40.3 | Plus |
Dyak\GE14076-PA | 378 | GE14076-PA | 116..361 | 112..359 | 292 | 27.3 | Plus |
Translation from 316 to 1428
> GH26270.hyp MSMLARTVGRTFMQAAAARSLHTTSTLRATDNYGANRTTCTLIPGDGVGP ELVYSLQEVFKAASVPVDFECYFLSEINPVLSAKLEDVVASIQKNKVCIK GVLATPDYSNVGDLQTLNMKLRNDLDLYANVVHVRSLPGVKTRHTNIDTV IIREQTEGEYSALEHESVPGIVECLKIITAKKSMRIAKFAFDYATKNQRK KVTAVHKANIMKLGDGLFLRSCEEVSRLYPRIQFEKMIVDNTTMQMVSNP NQFDVMVTPNLYGAIVDNLASGLVGGAGVVAGASYSSESVVFEPGARHTF AEAVGKNVANPTAMLLCGVKLLRHINLPTYGEIIQNAINKVLNDGKVRTK DLGGQSTTQDFTRAIILNMS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6439-PB | 370 | CG6439-PB | 1..370 | 1..370 | 1874 | 100 | Plus |
CG6439-PA | 370 | CG6439-PA | 1..370 | 1..370 | 1874 | 100 | Plus |
CG5028-PC | 392 | CG5028-PC | 35..387 | 22..370 | 791 | 43.7 | Plus |
CG5028-PD | 393 | CG5028-PD | 35..387 | 22..370 | 791 | 43.7 | Plus |
CG5028-PB | 402 | CG5028-PB | 35..387 | 22..370 | 791 | 43.7 | Plus |