BDGP Sequence Production Resources |
Search the DGRC for GH26351
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 263 |
Well: | 51 |
Vector: | pOT2 |
Associated Gene/Transcript | Chmp1-RA |
Protein status: | GH26351.pep: gold |
Preliminary Size: | 937 |
Sequenced Size: | 820 |
Gene | Date | Evidence |
---|---|---|
CG4108 | 2001-01-01 | Release 2 assignment |
CG4108 | 2001-10-10 | Blastp of sequenced clone |
CG4108 | 2003-01-01 | Sim4 clustering to Release 3 |
Chmp1 | 2008-04-29 | Release 5.5 accounting |
Chmp1 | 2008-08-15 | Release 5.9 accounting |
Chmp1 | 2008-12-18 | 5.12 accounting |
820 bp (820 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060798
> GH26351.complete AAATCCTCCAATAAAAACAACGTAGATTGATCAAATTCGTCGGTTTGAGT TGCAAACCAACACCTAATATTTTTTCTTCGTTCGTCATTGTAAATTCGTC AAGCTGGGTAACGACATGTCTACGAGTTCCATGGAAAAACACCTTTTCAA TCTAAAGTTTGCCGTAAAGGAATTGGAACGAAACTCAAAGAAATGTGAGA AGGAGGAGAAGCTGGAGAAGGCAAAGGCCAAGAAGGCGATTCAGAAGGGC AACATGGACGTGGCCCGCATCCACGCAGAGAATGCGATCCGCCAGAAGAA CCAGGCGGTTAACTACCTCAGGATGAGTGCCCGAGTGGATGCAGTGGCCA GTAGGGTTCAGTCCGCACTCACCACCCGCAAGGTCACCGGCTCCATGGCC GGCGTGGTCAAGGCCATGGATGCAGCTATGAAGGGTATGAACCTGGAGAA GATTTCCTCCCTGATGGAGAAGTTTGAATCGCAGTTCGAAGACCTGGACG TCCAGAGCTCGGTAATGGAGGGCACCATGTCCGACACGGTAACCACCTCG GTGCCTCAGGGAGATGTCGACAATCTGCTCCAGCAAGTGGCCGACGAGGC TGGCCTCGAACTCAACATGGAGCTGCCCAGCGGAGTTCAGAGCCAATCCG TTGGAGCCTCGACAGCAGTGTCCCAAGAGCAAGACGAGCTCACCCAGCGA CTGGCACGTCTCCGCCAGGCTGAATAAAAATAGCGACGCCCTGCCCGTTG AATTTCTGTTTTAGCAATTAAGTACATTCAAAATATAAATAAGTATAAAC TCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Chmp1-RA | 1193 | Chmp1-RA | 134..936 | 1..803 | 4015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 18672824..18673488 | 138..802 | 99 | <- | Minus |
chr3L | 18673560..18673696 | 1..137 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Chmp1-RA | 1..612 | 116..727 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Chmp1-RA | 1..612 | 116..727 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Chmp1-RA | 1..612 | 116..727 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Chmp1-RA | 1..612 | 116..727 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Chmp1-RA | 1..612 | 116..727 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Chmp1-RA | 44..845 | 1..802 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Chmp1-RA | 44..845 | 1..802 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Chmp1-RA | 46..847 | 1..802 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Chmp1-RA | 44..845 | 1..802 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Chmp1-RA | 46..847 | 1..802 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18683144..18683808 | 138..802 | 100 | <- | Minus |
3L | 18683880..18684016 | 1..137 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18683144..18683808 | 138..802 | 100 | <- | Minus |
3L | 18683880..18684016 | 1..137 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18683144..18683808 | 138..802 | 100 | <- | Minus |
3L | 18683880..18684016 | 1..137 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 18676980..18677116 | 1..137 | 100 | Minus | |
arm_3L | 18676244..18676908 | 138..802 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18676244..18676908 | 138..802 | 100 | <- | Minus |
3L | 18676980..18677116 | 1..137 | 100 | Minus |
Translation from 115 to 726
> GH26351.hyp MSTSSMEKHLFNLKFAVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVA RIHAENAIRQKNQAVNYLRMSARVDAVASRVQSALTTRKVTGSMAGVVKA MDAAMKGMNLEKISSLMEKFESQFEDLDVQSSVMEGTMSDTVTTSVPQGD VDNLLQQVADEAGLELNMELPSGVQSQSVGASTAVSQEQDELTQRLARLR QAE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Chmp1-PB | 203 | CG4108-PB | 1..203 | 1..203 | 982 | 100 | Plus |
Chmp1-PA | 203 | CG4108-PA | 1..203 | 1..203 | 982 | 100 | Plus |
Vps2-PA | 256 | CG14542-PA | 15..201 | 6..189 | 237 | 28.3 | Plus |
CHMP2B-PA | 212 | CG4618-PA | 22..212 | 12..202 | 160 | 19.9 | Plus |
Translation from 115 to 726
> GH26351.pep MSTSSMEKHLFNLKFAVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVA RIHAENAIRQKNQAVNYLRMSARVDAVASRVQSALTTRKVTGSMAGVVKA MDAAMKGMNLEKISSLMEKFESQFEDLDVQSSVMEGTMSDTVTTSVPQGD VDNLLQQVADEAGLELNMELPSGVQSQSVGASTAVSQEQDELTQRLARLR QAE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10809-PA | 203 | GF10809-PA | 1..203 | 1..203 | 1022 | 96.6 | Plus |
Dana\GF16804-PA | 252 | GF16804-PA | 25..191 | 16..179 | 174 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15729-PA | 203 | GG15729-PA | 1..203 | 1..203 | 1053 | 100 | Plus |
Dere\GG11461-PA | 256 | GG11461-PA | 22..201 | 13..189 | 178 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17196-PA | 203 | GH17196-PA | 1..203 | 1..203 | 1023 | 96.6 | Plus |
Dgri\GH19462-PA | 259 | GH19462-PA | 22..197 | 13..184 | 172 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Chmp1-PB | 203 | CG4108-PB | 1..203 | 1..203 | 982 | 100 | Plus |
Chmp1-PA | 203 | CG4108-PA | 1..203 | 1..203 | 982 | 100 | Plus |
Vps2-PA | 256 | CG14542-PA | 15..201 | 6..189 | 237 | 28.3 | Plus |
CHMP2B-PA | 212 | CG4618-PA | 22..212 | 12..202 | 160 | 19.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11307-PA | 203 | GI11307-PA | 1..203 | 1..203 | 1024 | 96.1 | Plus |
Dmoj\GI24696-PA | 253 | GI24696-PA | 22..196 | 13..184 | 167 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22691-PA | 198 | GL22691-PA | 1..198 | 1..203 | 862 | 92.2 | Plus |
Dper\GL21825-PA | 256 | GL21825-PA | 22..196 | 13..184 | 174 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17963-PA | 204 | GA17963-PA | 1..204 | 1..203 | 925 | 96.1 | Plus |
Dpse\GA13067-PA | 256 | GA13067-PA | 22..196 | 13..184 | 173 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14926-PA | 203 | GM14926-PA | 1..203 | 1..203 | 1053 | 100 | Plus |
Dsec\GM10303-PA | 256 | GM10303-PA | 22..201 | 13..189 | 178 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12332-PA | 203 | GD12332-PA | 1..203 | 1..203 | 1053 | 100 | Plus |
Dsim\GD21266-PA | 256 | GD21266-PA | 22..201 | 13..189 | 178 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14099-PA | 203 | GJ14099-PA | 1..203 | 1..203 | 1037 | 98 | Plus |
Dvir\GJ23912-PA | 251 | GJ23912-PA | 25..191 | 16..179 | 166 | 28.1 | Plus |