BDGP Sequence Production Resources |
Search the DGRC for GH26447
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 264 |
Well: | 47 |
Vector: | pOT2 |
Associated Gene/Transcript | Gfrl-RK |
Protein status: | GH26447.pep: gold |
Preliminary Size: | 2922 |
Sequenced Size: | 3114 |
Gene | Date | Evidence |
---|---|---|
CG4335 | 2001-01-01 | Release 2 assignment |
CG17205 | 2001-01-01 | Release 2 assignment |
CG17208 | 2001-01-01 | Release 2 assignment |
CG17205 | 2003-01-01 | Sim4 clustering to Release 3 |
CG34118 | 2008-04-29 | Release 5.5 accounting |
CG34118 | 2008-08-15 | Release 5.9 accounting |
CG34118 | 2008-12-18 | 5.12 accounting |
3114 bp (3114 high quality bases) assembled on 2002-07-14
GenBank Submission: BT001445
> GH26447.complete GTTACAGCAACCAAAACGCGAGGATAACTCAGACAGGATAACAATATCGT GCGATCCTTCGACGAGGGTCGGTTGAATATAAATATAGAGGTGGCCCCAG AGGCAAAAGCACGAAATAACCCCGTACCAAAGTGTTTAGAAAGTGCAAAA GTGTGTGTTTGTGTGAGAGATAGATAGAGAGAGAGGGAGAAAGGAAGAGA GTGGCATTATGGGCATTGCACGCAGTTTGAACTTGTGGCAAAGCCGCAAA TGCAACGGCTAGTTGCGAATTCACAGCGTGCCACGGGCAATATACTGACA CCTCCATCTCGTTCGGTCCCGATCCCGTACCCGCATCCGTTGCTGGTACC CCGGTAAATCCGTGTCCATCGAAATAACCCGTAACCCGTAACCCGTTTCG CATCCGTATTCCGTATTCCGTGTTCCGTGTTCGCGTCGCGGTTCGTTGAG CTGGCAGGCCAAAACTGTCGGTTTAGTTGCGCCATCGCCATTATCTATAT GCCAACATAGCAGAACTCGACTGAAGATTGCATCCCATATCCGCGGAACG TGTCGCCATCGCCACCGCTAGCCATGTGAACTGTGAGGCAAACAATTTAA AGTTGTAAAATTCAATTAATAACCAATGAACATAAATCCAAAAAGCAATT AATGTGAACGAAGGAATTTAAATAAGTCCATAACTTTAACGATACATATC AATGTTAGTCTGATTTTCCTTTAATACCATTAGCTTATTAAATACCCACA TACACGTCGAAATATTAAAAGTGCTAAGATTCTTTAAAAATATCCAAGTT TAAAGCATAGCCTAGAGCAATTAAATCGATTTGATATACTTAGAAAACAA GTGAAGCGTTGAAAACGAGACCCGGTGGCAAAATAAACATTTAATTAAAT CGACTGCGTGTGCAGAAGGATGCAATTTAATTGAATGGATATAAGGAATC ACGCGAGTTTTCCTGAAAAAAAACGTCAAAAACACGCACATCCGTGTCGC GCCAAAACGCTTTGTCATGTAATGTCTTTATGTCCTCAAGCGGATCAAGT GCTTAGGCGATAAGGAAAAGCAGCTGGAGCGGCTGGCTCCTTTCCGGATT TCCGGATTATATGCATAAATGAAAGCACGCATGCCCCGGCCGTAAGCCAA AGTTTCAAGGGGCCTAGGATTCCATCGCACAGCGGATTAGCTGCAACATA AAGCCATACACTAAGACACACGCACACACACACAAAAGTCCTGAATAGAG GCAAAAACGCGAAGAAGCAGCAGGAAGCTGGGATTTGGTGCCCTCCATGA CGTCAACTGTGTGTAAATGGGCAAGCAATTAAGCCGTTAACGATGTGCCC GCTCTCAAAGGCGCCACGCAGGACCTCCAGGACCTCCACGAACTTCAGCA CCACCCCGATCCAGAAAGCGATAGAACGCCAGATAGAGTCCTTTACGAGC ACAAGCGAACCAATAAAAAATGCATTCAGTCGCGTTGCGTCCAATGTCGC TGATTAATTCCAACTGAACAGTAGACAACGTCCGCTGATATCTGGATTCC ATTTGTACTACAACCAATGACAACATGCTGAAACCATTCGCCGTGATTAT CGGAATTTTTTATTTAGGTTCCACCATTAAGGGCGTCGTGGCCATTCTGA ACTGTATCCTAGCACGTCAGCTATGCTTCGAGGATCCCTCATGTTCGGCC ATTTTGGAAATAATACCTCGCGTCTGCGGACCCATTCCAGTGTCCTGCAG CACGGTGACGGTGACCAAGTGTCAGGCTGCCCTGCGCACCCTGCAGGCCT TCCAGTTCTTTCGGCCCACCTGCCTGTGCAAGGAGCCCGGAATGGATCCG GACTGCAATCACTTTCGGGACTTTCTCTTCGATCATCCATGCGGATTTGT GCTGAAGAAAGCCGAAAAGGATCCGTACCCCATTGATGCCCTACCAACTT GCAACCATGCACTTTCCGTCTGCCAACAGGAACGCAAATGTCTAAAGCTC TTCGAGGACTTCAAAACGCATTGCAAAGTGCGCGACAACAAATGCAAAAT GGAAAACAGGGACGCCTGCCACGACTCCTGGACCAACCTGCGTCTGTCGC CCATGTTCGGATGCATCTGCCCGAACAACCATATGAAAAAGCGCTGTGAT CGTATCTTTAATATTGTTAATCACAATCCTTGCGTGGGTAAGTTTCGACT GGCGATGCTGAACTGTTGACCGTGACTTCAGAAACAACTATAACAACCAA TAACAACTACAACAAGCAACAACACATACAGCTGAAAGTAAAAACAAAAA GCAAATGCTTTGAAAATCGTGGATAAACCATATAGATTTTATTTTCATTG TCCTCTGTTCTTATGTGTCTCTATTTCTCTGTCAACCCTATGGTATTCAA AACGATGATCACCTTTACCTGCCTATAACGAAACTGATTTGGTTCGTTCT TAACTGAATTTTGAGTTGATTTTTCGTTCGTTGGATTCATTTGGTTATTG TAATTTTGTGAAACGCTCAAACCCGAAACTAGCCTAACCATTTAAGTAAC CTAAACAAATACCAGAAACTAAAATATCGCACGCTTCTGCATCAAAAACC AACTAGAGAAAACCCAAAAATGAAACCCATGTTCTGCGATCAGTAAACAG TAATCAATATGCCTATATCCAATATATATCATACTGTACGAACATTAGCA ATGCTATCAGTAATCCTAAATATCACGTATACGAATGTATATCAATGTAA ACCAAAGCTGCCGTGCTATCTCTTTCTACCTCTCTCTCTCTCTCTCTCTC TCTACCTCTCTCTTTCTCTATCTGTCACTTAAAAAAGTTTGTTGTAGCTG TAAGCTATCAGCCCATTAAACATACTCGTCACTCGCTAAAGTTAACTGCC ACCCAGCGAACTGAGTCCGTGCTTTAGATTGATTGCACCCAAGAACACTA TATCTAGAAATTACTATCTCTCTAACCGTAGATATAAGACTATCGCTAGA TCAAGCTATACTAACAACAATCATTCAATGTGCAGGACTAGGGCTAGCAT ATTAACATCGCTCAGTTGAAAGCTTTGATTTGAAACCCACGCCAGACCAC CGAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34118-RA | 3181 | CG34118-RA | 66..3178 | 1..3113 | 15550 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 16224217..16225266 | 3102..2057 | 5080 | 99.1 | Minus |
chr3R | 27901430 | chr3R | 16304666..16305607 | 1513..576 | 4525 | 98.9 | Minus |
chr3R | 27901430 | chr3R | 16307938..16308514 | 577..1 | 2885 | 100 | Minus |
chr3R | 27901430 | chr3R | 16227181..16227354 | 1911..1738 | 870 | 100 | Minus |
chr3R | 27901430 | chr3R | 16226969..16227119 | 2060..1910 | 755 | 100 | Minus |
chr3R | 27901430 | chr3R | 16235040..16235164 | 1740..1616 | 625 | 100 | Minus |
chr3R | 27901430 | chr3R | 16288965..16289077 | 1619..1507 | 535 | 98.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 20400253..20401309 | 3113..2057 | 5270 | 99.9 | Minus |
3R | 32079331 | 3R | 20480693..20481630 | 1513..576 | 4690 | 100 | Minus |
3R | 32079331 | 3R | 20483975..20484551 | 577..1 | 2885 | 100 | Minus |
3R | 32079331 | 3R | 20403224..20403397 | 1911..1738 | 870 | 100 | Minus |
3R | 32079331 | 3R | 20403012..20403162 | 2060..1910 | 755 | 100 | Minus |
3R | 32079331 | 3R | 20411082..20411206 | 1740..1616 | 625 | 100 | Minus |
3R | 32079331 | 3R | 20465005..20465117 | 1619..1507 | 535 | 98.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 20141084..20142140 | 3113..2057 | 5270 | 99.9 | Minus |
3R | 31820162 | 3R | 20221524..20222461 | 1513..576 | 4690 | 100 | Minus |
3R | 31820162 | 3R | 20224806..20225382 | 577..1 | 2885 | 100 | Minus |
3R | 31820162 | 3R | 20144055..20144228 | 1911..1738 | 870 | 100 | Minus |
3R | 31820162 | 3R | 20143843..20143993 | 2060..1910 | 755 | 100 | Minus |
3R | 31820162 | 3R | 20151913..20152037 | 1740..1616 | 625 | 100 | Minus |
3R | 31820162 | 3R | 20205836..20205948 | 1619..1507 | 535 | 98.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 16224217..16224495 | 2824..3102 | 99 | == | Minus |
chr3R | 16224555..16225263 | 2060..2768 | 93 | <- | Minus |
chr3R | 16226970..16227117 | 1912..2059 | 100 | <- | Minus |
chr3R | 16227181..16227351 | 1741..1911 | 100 | <- | Minus |
chr3R | 16235040..16235162 | 1618..1740 | 100 | <- | Minus |
chr3R | 16288967..16289070 | 1514..1617 | 100 | <- | Minus |
chr3R | 16304666..16305607 | 576..1513 | 98 | <- | Minus |
chr3R | 16307940..16308514 | 1..575 | 93 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34118-RA | 1..645 | 1575..2219 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42801-RC | 1..645 | 1575..2219 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gfrl-RK | 1..645 | 1575..2219 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34118-RA | 1..645 | 1575..2219 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gfrl-RK | 1..645 | 1575..2219 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34118-RA | 1..3102 | 1..3102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42801-RC | 1..3102 | 1..3102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gfrl-RK | 38..3139 | 1..3102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34118-RA | 1..3102 | 1..3102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gfrl-RK | 38..3139 | 1..3102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20403013..20403160 | 1912..2059 | 100 | <- | Minus |
3R | 20403224..20403394 | 1741..1911 | 100 | <- | Minus |
3R | 20411082..20411204 | 1618..1740 | 100 | <- | Minus |
3R | 20465007..20465110 | 1514..1617 | 100 | <- | Minus |
3R | 20400264..20401306 | 2060..3102 | 100 | <- | Minus |
3R | 20480693..20481630 | 576..1513 | 100 | <- | Minus |
3R | 20483977..20484551 | 1..575 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20403013..20403160 | 1912..2059 | 100 | <- | Minus |
3R | 20403224..20403394 | 1741..1911 | 100 | <- | Minus |
3R | 20411082..20411204 | 1618..1740 | 100 | <- | Minus |
3R | 20465007..20465110 | 1514..1617 | 100 | <- | Minus |
3R | 20400264..20401306 | 2060..3102 | 100 | <- | Minus |
3R | 20480693..20481630 | 576..1513 | 100 | <- | Minus |
3R | 20483977..20484551 | 1..575 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20403013..20403160 | 1912..2059 | 100 | <- | Minus |
3R | 20403224..20403394 | 1741..1911 | 100 | <- | Minus |
3R | 20411082..20411204 | 1618..1740 | 100 | <- | Minus |
3R | 20465007..20465110 | 1514..1617 | 100 | <- | Minus |
3R | 20400264..20401306 | 2060..3102 | 100 | <- | Minus |
3R | 20480693..20481630 | 576..1513 | 100 | <- | Minus |
3R | 20483977..20484551 | 1..575 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 16225986..16227028 | 2060..3102 | 100 | <- | Minus |
arm_3R | 16228735..16228882 | 1912..2059 | 100 | <- | Minus |
arm_3R | 16228946..16229116 | 1741..1911 | 100 | <- | Minus |
arm_3R | 16236804..16236926 | 1618..1740 | 100 | <- | Minus |
arm_3R | 16290729..16290832 | 1514..1617 | 100 | <- | Minus |
arm_3R | 16306415..16307352 | 576..1513 | 100 | <- | Minus |
arm_3R | 16309699..16310273 | 1..575 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20141095..20142137 | 2060..3102 | 100 | <- | Minus |
3R | 20143844..20143991 | 1912..2059 | 100 | <- | Minus |
3R | 20144055..20144225 | 1741..1911 | 100 | <- | Minus |
3R | 20151913..20152035 | 1618..1740 | 100 | <- | Minus |
3R | 20205838..20205941 | 1514..1617 | 100 | <- | Minus |
3R | 20221524..20222461 | 576..1513 | 100 | <- | Minus |
3R | 20224808..20225382 | 1..575 | 100 | Minus |
Translation from 1574 to 2218
> GH26447.hyp MLKPFAVIIGIFYLGSTIKGVVAILNCILARQLCFEDPSCSAILEIIPRV CGPIPVSCSTVTVTKCQAALRTLQAFQFFRPTCLCKEPGMDPDCNHFRDF LFDHPCGFVLKKAEKDPYPIDALPTCNHALSVCQQERKCLKLFEDFKTHC KVRDNKCKMENRDACHDSWTNLRLSPMFGCICPNNHMKKRCDRIFNIVNH NPCVGKFRLAMLNC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gfrl-PK | 214 | CG43224-PK | 1..214 | 1..214 | 1197 | 100 | Plus |
Gfrl-PF | 864 | CG43224-PF | 1..205 | 1..205 | 1149 | 100 | Plus |
Gfrl-PH | 1101 | CG43224-PH | 1..206 | 1..206 | 1144 | 99 | Plus |
Gfrl-PJ | 1212 | CG43224-PJ | 1..206 | 1..206 | 1144 | 99 | Plus |
Gfrl-PG | 1212 | CG43224-PG | 1..206 | 1..206 | 1144 | 99 | Plus |
Translation from 1574 to 2218
> GH26447.pep MLKPFAVIIGIFYLGSTIKGVVAILNCILARQLCFEDPSCSAILEIIPRV CGPIPVSCSTVTVTKCQAALRTLQAFQFFRPTCLCKEPGMDPDCNHFRDF LFDHPCGFVLKKAEKDPYPIDALPTCNHALSVCQQERKCLKLFEDFKTHC KVRDNKCKMENRDACHDSWTNLRLSPMFGCICPNNHMKKRCDRIFNIVNH NPCVGKFRLAMLNC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23210-PA | 732 | GF23210-PA | 359..510 | 56..207 | 825 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15490-PA | 279 | GG15490-PA | 7..52 | 162..207 | 248 | 93.5 | Plus |
Dere\GG15468-PA | 124 | GG15468-PA | 76..122 | 9..55 | 211 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14172-PA | 346 | GH14172-PA | 1..118 | 90..207 | 643 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gfrl-PK | 214 | CG43224-PK | 1..214 | 1..214 | 1197 | 100 | Plus |
Gfrl-PF | 864 | CG43224-PF | 1..205 | 1..205 | 1149 | 100 | Plus |
Gfrl-PH | 1101 | CG43224-PH | 1..206 | 1..206 | 1144 | 99 | Plus |
Gfrl-PJ | 1212 | CG43224-PJ | 1..206 | 1..206 | 1144 | 99 | Plus |
Gfrl-PG | 1212 | CG43224-PG | 1..206 | 1..206 | 1144 | 99 | Plus |
Gfrl-PN | 1212 | CG43224-PN | 1..206 | 1..206 | 1144 | 99 | Plus |
Gfrl-PL | 1217 | CG43224-PL | 1..206 | 1..206 | 1144 | 99 | Plus |
Gfrl-PI | 1168 | CG43224-PI | 82..273 | 15..206 | 1074 | 99 | Plus |
Gfrl-PE | 1279 | CG43224-PE | 82..273 | 15..206 | 1074 | 99 | Plus |
Gfrl-PM | 1042 | CG43224-PM | 82..271 | 15..204 | 1073 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10545-PA | 380 | GI10545-PA | 1..118 | 90..207 | 644 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24094-PA | 323 | GL24094-PA | 12..163 | 56..207 | 808 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30155-PB | 1183 | GA30155-PB | 77..280 | 9..207 | 1048 | 95.1 | Plus |
Dpse\GA30155-PA | 1338 | GA30155-PA | 77..280 | 9..207 | 1048 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23195-PA | 274 | GM23195-PA | 7..52 | 162..207 | 249 | 93.5 | Plus |
Dsec\GM23193-PA | 154 | GM23193-PA | 82..129 | 15..62 | 212 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20069-PA | 274 | GD20069-PA | 7..52 | 162..207 | 249 | 93.5 | Plus |
Dsim\GD20067-PA | 62 | GD20067-PA | 3..50 | 15..62 | 210 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24199-PA | 405 | GJ24199-PA | 20..171 | 56..207 | 819 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22733-PA | 301 | GK22733-PA | 29..85 | 56..112 | 314 | 98.2 | Plus |