BDGP Sequence Production Resources |
Search the DGRC for GH26786
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 267 |
Well: | 86 |
Vector: | pOT2 |
Associated Gene/Transcript | fln-RA |
Protein status: | GH26786.pep: gold |
Preliminary Size: | 1101 |
Sequenced Size: | 995 |
Gene | Date | Evidence |
---|---|---|
CG7445 | 2001-01-01 | Release 2 assignment |
CG7445 | 2001-10-10 | Blastp of sequenced clone |
CG7445 | 2003-01-01 | Sim4 clustering to Release 3 |
fln | 2008-04-29 | Release 5.5 accounting |
fln | 2008-08-15 | Release 5.9 accounting |
fln | 2008-12-18 | 5.12 accounting |
995 bp (995 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060802
> GH26786.complete TATAAACACTATAGTAAAGTAATATGGCAGACGAAGAAGATCCATGGGGT TTCGACGACGGCGGCGAGGAGGAGAAGGCGGCATCCACCCAGGCGGGCAC TCCGGCCCCACCCTCAAAAGCACCGAGTGTGGCATCCGATCACAAGGCTG ATAGCGTCGTGGCTGGCACTCCGGCCAACGAGGAGGCTGCTCCGGAAGAG GTAGAAGAAATCAAAGCACCGCCGCCTCCGCCAGAAGACGATGGTTACAG GAAACCGGTGCAGCTCTACCGCCACTGGGTCAGGCCGAAGTTTCTGCAAT ACAAATACATGTACAACTACAGAACCAACTATTACGATGATGTAATTGAC TATATCGACAAAAAACAAACTGGAGTGGCCCGGGAAATACCAAGACCACA GACGTGGGCGGAACGTGTCCTGCGCACACGGAATATCAGTGGCAGTGACA TTGATTCGTATGCACCGGCAAAGAGGGACAAACAACTAATTCAAACACTG GCGGCCTCGATAAGAACTTATAATTACCACACCAAGGCATATATCAACCA AAGGTATGCCAGTGTCCTTTAGTAAGCGCACCTAAATGTACCAATAGAAC CGTCGGACGAACGGATGAGCACTCGTAGTTATATAAAGGGTAACCACCCA TTGTCAAAAGATCCATACGTACATATGTGTATAGTCAGTCAGTAAGCGTT TGCATATCTGCGCATCTCAAAACTCTGTATCCTGAATCTGCCTTATGGAG TGGAGACCTTTCAAGAAAACGAATATTGTATATTTTTTCTTACATGCGTA ATTTCTGTTAATATATTGCCATATGTACTTATTCATATATATTAACACAA CTTACCTCTCAATACATGGTATTTTTAAGGTTATTTACTTCATTTTTAGC AAAGTGAGTAAATAAAACAAACCTATTTATATTGTAAAGCTTAAAATAAA AACTGTGCAATAAATAAAACTAAATAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fln-RA | 1230 | fln-RA | 256..1230 | 1..975 | 4875 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 19978869..19979408 | 975..436 | 2700 | 100 | Minus |
chr3L | 24539361 | chr3L | 19979688..19979954 | 284..18 | 1335 | 100 | Minus |
chr3L | 24539361 | chr3L | 19979467..19979626 | 439..280 | 800 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 19989548..19990090 | 978..436 | 2715 | 100 | Minus |
3L | 28110227 | 3L | 19990370..19990636 | 284..18 | 1335 | 100 | Minus |
3L | 28110227 | 3L | 19990149..19990308 | 439..280 | 800 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 19982648..19983190 | 978..436 | 2715 | 100 | Minus |
3L | 28103327 | 3L | 19983470..19983736 | 284..18 | 1335 | 100 | Minus |
3L | 28103327 | 3L | 19983249..19983408 | 439..280 | 800 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TART-C | 11124 | TART-C TARTC 11124bp | 391..474 | 911..825 | 121 | 63.2 | Minus |
rover | 7318 | rover ROVER 7318bp | 3978..4016 | 878..840 | 114 | 76.9 | Minus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 1152..1230 | 905..825 | 112 | 61.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19978869..19979404 | 440..975 | 100 | <- | Minus |
chr3L | 19979467..19979622 | 284..439 | 100 | <- | Minus |
chr3L | 19979689..19979952 | 20..283 | 100 | <- | Minus |
chr3L | 19980467..19980485 | 1..19 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fln-RA | 1..549 | 24..572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fln-RA | 1..549 | 24..572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fln-RA | 1..549 | 24..572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fln-RA | 1..549 | 24..572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fln-RA | 1..549 | 24..572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fln-RA | 1..975 | 1..975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fln-RA | 13..987 | 1..975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fln-RA | 13..987 | 1..975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fln-RA | 1..975 | 1..975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fln-RA | 54..1028 | 1..975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19989551..19990086 | 440..975 | 100 | <- | Minus |
3L | 19990149..19990304 | 284..439 | 100 | <- | Minus |
3L | 19990371..19990634 | 20..283 | 100 | <- | Minus |
3L | 19991149..19991167 | 1..19 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19989551..19990086 | 440..975 | 100 | <- | Minus |
3L | 19990149..19990304 | 284..439 | 100 | <- | Minus |
3L | 19990371..19990634 | 20..283 | 100 | <- | Minus |
3L | 19991149..19991167 | 1..19 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19989551..19990086 | 440..975 | 100 | <- | Minus |
3L | 19990149..19990304 | 284..439 | 100 | <- | Minus |
3L | 19990371..19990634 | 20..283 | 100 | <- | Minus |
3L | 19991149..19991167 | 1..19 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19984249..19984267 | 1..19 | 100 | Minus | |
arm_3L | 19982651..19983186 | 440..975 | 100 | <- | Minus |
arm_3L | 19983249..19983404 | 284..439 | 100 | <- | Minus |
arm_3L | 19983471..19983734 | 20..283 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19982651..19983186 | 440..975 | 100 | <- | Minus |
3L | 19983249..19983404 | 284..439 | 100 | <- | Minus |
3L | 19983471..19983734 | 20..283 | 100 | <- | Minus |
3L | 19984249..19984267 | 1..19 | 100 | Minus |
Translation from 23 to 571
> GH26786.hyp MADEEDPWGFDDGGEEEKAASTQAGTPAPPSKAPSVASDHKADSVVAGTP ANEEAAPEEVEEIKAPPPPPEDDGYRKPVQLYRHWVRPKFLQYKYMYNYR TNYYDDVIDYIDKKQTGVAREIPRPQTWAERVLRTRNISGSDIDSYAPAK RDKQLIQTLAASIRTYNYHTKAYINQRYASVL*
Translation from 23 to 571
> GH26786.pep MADEEDPWGFDDGGEEEKAASTQAGTPAPPSKAPSVASDHKADSVVAGTP ANEEAAPEEVEEIKAPPPPPEDDGYRKPVQLYRHWVRPKFLQYKYMYNYR TNYYDDVIDYIDKKQTGVAREIPRPQTWAERVLRTRNISGSDIDSYAPAK RDKQLIQTLAASIRTYNYHTKAYINQRYASVL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10833-PA | 185 | GF10833-PA | 1..185 | 1..182 | 728 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13353-PA | 185 | GG13353-PA | 1..185 | 1..182 | 921 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14726-PA | 179 | GH14726-PA | 1..179 | 1..182 | 642 | 72.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fln-PB | 182 | CG7445-PB | 1..182 | 1..182 | 974 | 100 | Plus |
fln-PA | 182 | CG7445-PA | 1..182 | 1..182 | 974 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13378-PA | 183 | GI13378-PA | 1..183 | 1..182 | 674 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25050-PA | 187 | GL25050-PA | 1..187 | 1..182 | 729 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22938-PA | 181 | GA22938-PA | 1..181 | 7..182 | 698 | 76.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14859-PA | 182 | GM14859-PA | 1..182 | 1..182 | 953 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12234-PA | 182 | GD12234-PA | 1..182 | 1..182 | 953 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11502-PA | 187 | GJ11502-PA | 1..187 | 1..182 | 646 | 70 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18981-PA | 189 | GK18981-PA | 1..189 | 1..182 | 676 | 75.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\fln-PA | 182 | GE22446-PA | 1..182 | 1..182 | 949 | 99.5 | Plus |