BDGP Sequence Production Resources |
Search the DGRC for GH26960
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 269 |
Well: | 60 |
Vector: | pOT2 |
Associated Gene/Transcript | Porin2-RA |
Protein status: | GH26960.pep: gold |
Preliminary Size: | 1130 |
Sequenced Size: | 1123 |
Gene | Date | Evidence |
---|---|---|
CG17137 | 2002-01-01 | Sim4 clustering to Release 2 |
CG17137 | 2002-05-18 | Blastp of sequenced clone |
CG17137 | 2003-01-01 | Sim4 clustering to Release 3 |
Porin2 | 2008-04-29 | Release 5.5 accounting |
Porin2 | 2008-08-15 | Release 5.9 accounting |
Porin2 | 2008-12-18 | 5.12 accounting |
1123 bp (1123 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118823
> GH26960.complete CTCGATACTGATCAGGCAGCGTTAGACATAAATTTTCGGCTAATCGAGGC TGTTGAAAAGTAGACAAAAAATTTCGAAATTAGTCGGGCCATATATACCA TACCACCTATTCATACAGCCCGTAATGGCCGCCAAAACACCGACATACCC AGATCTGGGCAAGCTGGCCCGCGATCTCTTCAAGCGCGGCTACCATCCGG GCATCTGGCAGATCGACTGCAAGACCCTGACCAATTCGGGGATTGAGTTC TTCACCACCGGCTTCGCCAGCCAGGACAACAGCAAGGTGACCGGCTCGCT TCAGAGCAAGTACAAGATCGAGGACCAAGGCCTGACCCTAACCGAGCGAT GGAACACGGAGAACTGGCTCTTCGGTGAGATTATGCACCGGGATAAGTTG GCACAGGGCCTGATGTTGGCCGTCGAGGCCAAGTTTCAGCCGGGATCAAA TGAGGCGGATGGCAAGTTCAAGATGGGCTATGCCCAGGACAACTTTAACT TCCTGGCCGACATTGGACTGAACTCGGAGCCGATACTCAACTGTTCGCTG GTTGTGGGCCACAAGGAGTTCCTCGGCGGCGTGGGCACCGAATTTGACGT TGGCAACACCGAACTCAAGGGCTGGAAGGTGGCCCTTGGTTGGACAAATG AAACTGCCACCCTCCATGGCGAGCTGAAGAACGGCGACACCTGGTTGGCC TCGCTGTTCTACAAGGCGAGCGAGAAGATCGATGCCGGTATCGAGGTAAC CAAGGGAGCCGGCGGCGGCGAAGCTGCCGAGGGTGAACAGCAGGGCGGAG ATGTGGTCGTCAATCTGGGCATGATCTACCACTTGGAGGAGGATGCCCTC GTACGCGCCAAGGTCAACAACCTGGTGGAGCTGGGCCTGGGCTATGAACA GAAACTGCGCGACGGCATCACCGCCTCCATATCCGCCGTGCTGGATTGCA ACAACTTTAAGGACGGAAACCATCGGTTCGGCGTGGGAATTGCCCTCCAG TGCTAAAATGACTGCCAATCACTTAACGATTTCAATTTCTAAATTTATTT TTAAGTTTATCTTTATTCAAATGACAAATATATTTTGTTCTTCATAATGG CAATATAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10845343..10845792 | 450..1 | 2250 | 100 | Minus |
chr2L | 23010047 | chr2L | 10844558..10844988 | 1106..676 | 2155 | 100 | Minus |
chr2L | 23010047 | chr2L | 10845051..10845276 | 676..451 | 1130 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10846573..10847022 | 450..1 | 2250 | 100 | Minus |
2L | 23513712 | 2L | 10845786..10846218 | 1108..676 | 2165 | 100 | Minus |
2L | 23513712 | 2L | 10846281..10846506 | 676..451 | 1130 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10846573..10847022 | 450..1 | 2250 | 100 | Minus |
2L | 23513712 | 2L | 10845786..10846218 | 1108..676 | 2165 | 100 | Minus |
2L | 23513712 | 2L | 10846281..10846506 | 676..451 | 1130 | 100 | Minus |
2L | 23513712 | 2L | 10848630..10848702 | 364..292 | 155 | 80.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 1427..1495 | 1101..1034 | 136 | 70.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10845052..10845276 | 451..675 | 100 | <- | Minus |
chr2L | 10844558..10844988 | 676..1106 | 100 | <- | Minus |
chr2L | 10845343..10845792 | 1..450 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Porin2-RA | 1..882 | 125..1006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Porin2-RA | 1..882 | 125..1006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Porin2-RA | 1..882 | 125..1006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Porin2-RA | 1..882 | 125..1006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Porin2-RA | 1..882 | 125..1006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Porin2-RA | 23..1128 | 1..1106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Porin2-RA | 23..1128 | 1..1106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Porin2-RA | 23..1128 | 1..1106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Porin2-RA | 23..1128 | 1..1106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Porin2-RA | 23..1128 | 1..1106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10845788..10846218 | 676..1106 | 100 | <- | Minus |
2L | 10846282..10846506 | 451..675 | 100 | <- | Minus |
2L | 10846573..10847022 | 1..450 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10845788..10846218 | 676..1106 | 100 | <- | Minus |
2L | 10846282..10846506 | 451..675 | 100 | <- | Minus |
2L | 10846573..10847022 | 1..450 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10845788..10846218 | 676..1106 | 100 | <- | Minus |
2L | 10846282..10846506 | 451..675 | 100 | <- | Minus |
2L | 10846573..10847022 | 1..450 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10846282..10846506 | 451..675 | 100 | <- | Minus |
arm_2L | 10845788..10846218 | 676..1106 | 100 | <- | Minus |
arm_2L | 10846573..10847022 | 1..450 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10845788..10846218 | 676..1106 | 100 | <- | Minus |
2L | 10846282..10846506 | 451..675 | 100 | <- | Minus |
2L | 10846573..10847022 | 1..450 | 100 | Minus |
Translation from 124 to 1005
> GH26960.pep MAAKTPTYPDLGKLARDLFKRGYHPGIWQIDCKTLTNSGIEFFTTGFASQ DNSKVTGSLQSKYKIEDQGLTLTERWNTENWLFGEIMHRDKLAQGLMLAV EAKFQPGSNEADGKFKMGYAQDNFNFLADIGLNSEPILNCSLVVGHKEFL GGVGTEFDVGNTELKGWKVALGWTNETATLHGELKNGDTWLASLFYKASE KIDAGIEVTKGAGGGEAAEGEQQGGDVVVNLGMIYHLEEDALVRAKVNNL VELGLGYEQKLRDGITASISAVLDCNNFKDGNHRFGVGIALQC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14060-PA | 301 | GF14060-PA | 7..301 | 2..293 | 1248 | 80.3 | Plus |
Dana\GF14059-PA | 315 | GF14059-PA | 37..315 | 6..293 | 629 | 42.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10350-PA | 295 | GG10350-PA | 1..295 | 1..293 | 1491 | 95.6 | Plus |
Dere\GG10349-PA | 282 | GG10349-PA | 4..282 | 6..293 | 628 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13332-PA | 296 | GH13332-PA | 2..296 | 3..293 | 904 | 59.8 | Plus |
Dgri\GH14201-PA | 283 | GH14201-PA | 2..283 | 3..293 | 675 | 45.8 | Plus |
Dgri\GH13331-PA | 282 | GH13331-PA | 4..282 | 6..293 | 618 | 41.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Porin2-PB | 293 | CG17137-PB | 1..293 | 1..293 | 1550 | 100 | Plus |
Porin2-PA | 293 | CG17137-PA | 1..293 | 1..293 | 1550 | 100 | Plus |
porin-PE | 282 | CG6647-PE | 4..281 | 6..292 | 643 | 42.4 | Plus |
porin-PD | 282 | CG6647-PD | 4..281 | 6..292 | 643 | 42.4 | Plus |
porin-PC | 282 | CG6647-PC | 4..281 | 6..292 | 643 | 42.4 | Plus |
porin-PB | 282 | CG6647-PB | 4..281 | 6..292 | 643 | 42.4 | Plus |
porin-PA | 282 | CG6647-PA | 4..281 | 6..292 | 643 | 42.4 | Plus |
CG17139-PA | 340 | CG17139-PA | 57..333 | 1..286 | 150 | 22.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17808-PA | 288 | GI17808-PA | 4..288 | 6..293 | 908 | 61.8 | Plus |
Dmoj\GI17807-PA | 282 | GI17807-PA | 4..282 | 6..293 | 630 | 42.2 | Plus |
Dmoj\GI16915-PA | 330 | GI16915-PA | 50..330 | 1..293 | 170 | 20.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26380-PA | 297 | GL26380-PA | 4..297 | 6..293 | 1111 | 68.4 | Plus |
Dper\GL26379-PA | 282 | GL26379-PA | 4..282 | 6..293 | 624 | 42.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14341-PA | 297 | GA14341-PA | 4..297 | 6..293 | 1111 | 68 | Plus |
Dpse\GA19750-PA | 282 | GA19750-PA | 4..282 | 6..293 | 624 | 42.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11369-PA | 293 | GM11369-PA | 1..293 | 1..293 | 1506 | 96.6 | Plus |
Dsec\GM11358-PA | 282 | GM11358-PA | 4..282 | 6..293 | 630 | 42.2 | Plus |
Dsec\GM11391-PA | 361 | GM11391-PA | 83..361 | 6..293 | 157 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22219-PA | 293 | GD22219-PA | 1..293 | 1..293 | 1508 | 96.9 | Plus |
Dsim\GD22218-PA | 282 | GD22218-PA | 4..282 | 6..293 | 630 | 42.2 | Plus |
Dsim\GD22221-PA | 361 | GD22221-PA | 83..361 | 6..293 | 156 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17633-PA | 292 | GJ17633-PA | 2..292 | 3..293 | 963 | 61.6 | Plus |
Dvir\GJ17632-PA | 304 | GJ17632-PA | 26..304 | 6..293 | 627 | 42.2 | Plus |
Dvir\GJ17635-PA | 309 | GJ17635-PA | 31..309 | 4..293 | 176 | 22.1 | Plus |
Dvir\GJ17634-PA | 320 | GJ17634-PA | 39..320 | 1..293 | 175 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23976-PA | 292 | GK23976-PA | 4..292 | 6..293 | 1096 | 69.6 | Plus |
Dwil\GK23973-PA | 282 | GK23973-PA | 4..282 | 6..293 | 615 | 41.9 | Plus |
Dwil\GK23974-PA | 323 | GK23974-PA | 46..321 | 7..291 | 187 | 26.4 | Plus |
Dwil\GK23975-PA | 502 | GK23975-PA | 225..496 | 7..287 | 170 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13251-PA | 296 | GE13251-PA | 1..296 | 1..293 | 1499 | 95.6 | Plus |
Dyak\porin-PA | 282 | GE13240-PA | 4..282 | 6..293 | 630 | 42.2 | Plus |
Dyak\GE13273-PA | 359 | GE13273-PA | 81..359 | 6..293 | 159 | 24.4 | Plus |
Dyak\GE13262-PA | 342 | GE13262-PA | 57..336 | 1..287 | 152 | 22.9 | Plus |
Translation from 124 to 1005
> GH26960.hyp MAAKTPTYPDLGKLARDLFKRGYHPGIWQIDCKTLTNSGIEFFTTGFASQ DNSKVTGSLQSKYKIEDQGLTLTERWNTENWLFGEIMHRDKLAQGLMLAV EAKFQPGSNEADGKFKMGYAQDNFNFLADIGLNSEPILNCSLVVGHKEFL GGVGTEFDVGNTELKGWKVALGWTNETATLHGELKNGDTWLASLFYKASE KIDAGIEVTKGAGGGEAAEGEQQGGDVVVNLGMIYHLEEDALVRAKVNNL VELGLGYEQKLRDGITASISAVLDCNNFKDGNHRFGVGIALQC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Porin2-PB | 293 | CG17137-PB | 1..293 | 1..293 | 1550 | 100 | Plus |
Porin2-PA | 293 | CG17137-PA | 1..293 | 1..293 | 1550 | 100 | Plus |
porin-PE | 282 | CG6647-PE | 4..281 | 6..292 | 643 | 42.4 | Plus |
porin-PD | 282 | CG6647-PD | 4..281 | 6..292 | 643 | 42.4 | Plus |
porin-PC | 282 | CG6647-PC | 4..281 | 6..292 | 643 | 42.4 | Plus |