Clone GH26994 Report

Search the DGRC for GH26994

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:269
Well:94
Vector:pOT2
Associated Gene/TranscriptCG15084-RA
Protein status:GH26994.pep: gold
Preliminary Size:1196
Sequenced Size:1128

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15084 2001-01-01 Release 2 assignment
CG15084 2001-12-12 Blastp of sequenced clone
CG15084 2003-01-01 Sim4 clustering to Release 3
CG15084 2008-04-29 Release 5.5 accounting
CG15084 2008-08-15 Release 5.9 accounting
CG15084 2008-12-18 5.12 accounting

Clone Sequence Records

GH26994.complete Sequence

1128 bp (1128 high quality bases) assembled on 2001-12-12

GenBank Submission: AY070525

> GH26994.complete
TTTATTTACATTTGACAGCAAAAGATTGAGCTTGTAATTAGTTTAAATAT
TTAAGTAATCCTATCCACTTAAAAAATGGGTGAACGCAAGGGACAGAACA
AGTACTATCCGCCCGACTATGATCCGAAGAAGGGCGGTCTCAACAAGTTC
CAGGGAACCCACGCCCTGCGGGAACGGGCCCGCAAGATTCACCTGGGAAT
CATCATCATCCGCTTTGAGATGCCCTACAATATCTGGTGTGATGGATGCA
AGAACCACATCGGCATGGGCGTGCGCTACAATGCGGAGAAGACCAAGGTG
GGCATGTACTACACTACGCCGGTTTTTAAGTTCCGGATGAAGTGCCACTT
GTGCGACAACCACTTTGAGATCCAGACGGATCCCGGCAATTTGGACTATG
TTATACTTTCGGGGGCTAGACGGCAGGAGAACCGCTGGGATCCCTTGCAG
AACGAACAAGTTGTACCGGAAACCAAGGAGGTACAAAAGCGTCTCTTCGA
CGATGCCATGTACAAGTTGGAGCATCAAGCCAAGGATGCTAAGGCAGGGG
CAGATGCCAGGCCCGTGCTCCAGAAACTAGTGGAGCGCAACATGAGCGTC
TGGGATGACAGCTATATGGCCAATAGTCGCCTACGCGCCGAGTTTCGCCA
GCAGAAGAAAGAGATCAATGGTCAGCAGGAGCTGGATCGACAGTTGTTGG
CCAAGAGCAGCTTGGACATTGCTCTCCTTCCGGAGACCACACAAGATCGC
GAAATGGCAGCCCTGATGAAGTTGCAGACGAAGTCAGCTCTGGAACGGGA
ATCCGAGCAGCGGTTGGAGCTGCTTATGCGTCCAGCGCTTCCCGGAGCAA
CAGTCACCACATTTGGTGGACTCAAGCGACAAAAGGTTCTGAATACCCAG
CTCCAAGTACAGGATCTTGGCATACGGCGTAAAAAGTTGGAAGAAACTAC
ATCTTCAGCCACGAACGAAAAACCCATAAGCTTAGTGGGGGATTACTCCT
CCTCAGACAATGATTCCAACGGCTGATTTTATAATGCTTTCTTTATAAAT
AATTAAATGATTGTATAAAACAAAATAAGTACAAATAAAAAGAATTCTAA
TATAAAAAAAAAAAAAAAAAAAAAAAAA

GH26994.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:50:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG15084-RA 1103 CG15084-RA 1..1103 1..1103 5515 100 Plus
CG18190-RB 1136 CG18190-RB 1056..1136 1105..1025 405 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:00:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 14737989..14739091 1..1103 5515 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:10:01 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:00:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18850861..18851965 1..1105 5525 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:16:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 18852060..18853164 1..1105 5525 100 Plus
Blast to na_te.dros performed 2019-03-16 13:00:08
Subject Length Description Subject Range Query Range Score Percent Strand
S2 1735 S2 S2 1735bp 395..489 4..98 131 64.9 Plus
gypsy12 10218 gypsy12 GYPSY12 10218bp 1858..1918 1094..1033 127 69.4 Minus
gypsy12 10218 gypsy12 GYPSY12 10218bp 9740..9800 1094..1033 127 69.4 Minus

GH26994.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:00:47 Download gff for GH26994.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 14737989..14739091 1..1103 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:58:06 Download gff for GH26994.complete
Subject Subject Range Query Range Percent Splice Strand
CG15084-RA 1..951 76..1026 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:19:30 Download gff for GH26994.complete
Subject Subject Range Query Range Percent Splice Strand
CG15084-RA 1..951 76..1026 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:14:28 Download gff for GH26994.complete
Subject Subject Range Query Range Percent Splice Strand
CG15084-RA 1..951 76..1026 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:45:40 Download gff for GH26994.complete
Subject Subject Range Query Range Percent Splice Strand
CG15084-RA 1..951 76..1026 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:12:18 Download gff for GH26994.complete
Subject Subject Range Query Range Percent Splice Strand
CG15084-RA 1..951 76..1026 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:52:54 Download gff for GH26994.complete
Subject Subject Range Query Range Percent Splice Strand
CG15084-RA 1..1103 1..1103 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:19:29 Download gff for GH26994.complete
Subject Subject Range Query Range Percent Splice Strand
CG15084-RA 1..1103 1..1103 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:14:28 Download gff for GH26994.complete
Subject Subject Range Query Range Percent Splice Strand
CG15084-RA 18..1120 1..1103 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:45:41 Download gff for GH26994.complete
Subject Subject Range Query Range Percent Splice Strand
CG15084-RA 1..1103 1..1103 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:12:18 Download gff for GH26994.complete
Subject Subject Range Query Range Percent Splice Strand
CG15084-RA 18..1120 1..1103 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:00:47 Download gff for GH26994.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18850861..18851963 1..1103 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:00:47 Download gff for GH26994.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18850861..18851963 1..1103 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:00:47 Download gff for GH26994.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18850861..18851963 1..1103 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:14:28 Download gff for GH26994.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14738366..14739468 1..1103 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:22:02 Download gff for GH26994.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18852060..18853162 1..1103 100   Plus

GH26994.pep Sequence

Translation from 75 to 1025

> GH26994.pep
MGERKGQNKYYPPDYDPKKGGLNKFQGTHALRERARKIHLGIIIIRFEMP
YNIWCDGCKNHIGMGVRYNAEKTKVGMYYTTPVFKFRMKCHLCDNHFEIQ
TDPGNLDYVILSGARRQENRWDPLQNEQVVPETKEVQKRLFDDAMYKLEH
QAKDAKAGADARPVLQKLVERNMSVWDDSYMANSRLRAEFRQQKKEINGQ
QELDRQLLAKSSLDIALLPETTQDREMAALMKLQTKSALERESEQRLELL
MRPALPGATVTTFGGLKRQKVLNTQLQVQDLGIRRKKLEETTSSATNEKP
ISLVGDYSSSDNDSNG*

GH26994.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:16:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11122-PA 316 GF11122-PA 1..316 1..314 1528 89.2 Plus
Dana\GF13045-PA 332 GF13045-PA 1..106 1..116 182 34.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:16:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21932-PA 316 GG21932-PA 1..307 1..307 1519 94.8 Plus
Dere\GG22298-PA 338 GG22298-PA 1..106 1..116 184 34.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:16:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22130-PA 368 GH22130-PA 1..287 1..287 1459 90.2 Plus
Dgri\GH23000-PA 330 GH23000-PA 1..106 1..116 184 34.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:44:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG15084-PA 316 CG15084-PA 1..316 1..316 1651 100 Plus
CG8435-PA 333 CG8435-PA 1..195 1..204 185 26.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:16:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19358-PA 409 GI19358-PA 1..298 1..298 1448 86.6 Plus
Dmoj\GI18966-PA 349 GI18966-PA 1..106 1..116 181 34.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:16:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11492-PA 317 GL11492-PA 1..308 1..307 1432 88.3 Plus
Dper\GL11393-PA 319 GL11393-PA 1..106 1..116 180 34.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:16:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13478-PA 317 GA13478-PA 1..308 1..307 1432 88.3 Plus
Dpse\GA21076-PA 319 GA21076-PA 1..106 1..116 181 34.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:16:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21922-PA 316 GM21922-PA 1..316 1..316 1673 97.5 Plus
Dsec\GM20087-PA 333 GM20087-PA 1..106 1..116 186 34.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:16:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11416-PA 316 GD11416-PA 1..316 1..316 1673 97.8 Plus
Dsim\GD25564-PA 333 GD25564-PA 1..106 1..116 186 34.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:16:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19913-PA 366 GJ19913-PA 1..295 1..295 1408 89.2 Plus
Dvir\GJ20909-PA 315 GJ20909-PA 1..106 1..116 182 34.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:16:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20930-PA 318 GK20930-PA 1..303 1..308 1398 86.1 Plus
Dwil\GK15812-PA 337 GK15812-PA 1..106 1..116 184 34.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:16:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12005-PA 316 GE12005-PA 1..316 1..316 1584 95.9 Plus
Dyak\GE14094-PA 338 GE14094-PA 1..106 1..116 183 34.7 Plus

GH26994.hyp Sequence

Translation from 75 to 1025

> GH26994.hyp
MGERKGQNKYYPPDYDPKKGGLNKFQGTHALRERARKIHLGIIIIRFEMP
YNIWCDGCKNHIGMGVRYNAEKTKVGMYYTTPVFKFRMKCHLCDNHFEIQ
TDPGNLDYVILSGARRQENRWDPLQNEQVVPETKEVQKRLFDDAMYKLEH
QAKDAKAGADARPVLQKLVERNMSVWDDSYMANSRLRAEFRQQKKEINGQ
QELDRQLLAKSSLDIALLPETTQDREMAALMKLQTKSALERESEQRLELL
MRPALPGATVTTFGGLKRQKVLNTQLQVQDLGIRRKKLEETTSSATNEKP
ISLVGDYSSSDNDSNG*

GH26994.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:38:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG15084-PA 316 CG15084-PA 1..316 1..316 1651 100 Plus
CG8435-PA 333 CG8435-PA 1..195 1..204 185 26.9 Plus