Clone GH27027 Report

Search the DGRC for GH27027

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:270
Well:27
Vector:pOT2
Associated Gene/TranscriptNcc69-RA
Protein status:GH27027.pep: gold
Preliminary Size:3545
Sequenced Size:3926

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4357 2001-01-01 Release 2 assignment
CG4357 2002-03-20 Blastp of sequenced clone
CG4357 2003-01-01 Sim4 clustering to Release 3
Ncc69 2008-04-29 Release 5.5 accounting
Ncc69 2008-08-15 Release 5.9 accounting
Ncc69 2008-12-18 5.12 accounting

Clone Sequence Records

GH27027.complete Sequence

3926 bp (3926 high quality bases) assembled on 2002-03-20

GenBank Submission: AY094735

> GH27027.complete
TGCGTTTGGATAGCTATTGCCATAGCTCCTCATCGGAATCGGAATAGGAA
TCGGAATCGTTTGTCGGATCAGCTGCCACGTTTTGAACTCGAAGCAGCTT
TAAGCGACCGACTGGTCGACTGCCACTTTAATCGTCAGCGACGGATGTCC
TGATTTTACGACGAAGGGATACCCATACCCATACATATACATACACAATT
AGCCACAGTGGATGGGTCTGAAAGTTGCGACCCGCACACGGAAACCGCAT
AAGCACTCGGCGAAATCTTCCCGGGGCGAGGACCCCAAAAAGCACCGGCC
AAACAAACAAAAGCAGTCGCCCCAATGTCGGACACAATCTCTTTCGAGTT
GGGCTCAGCTGCCGACCGGCCCCCCAACAGGTTTCAAGTGAACCCGGTCA
ACGGCAACAGTCGTAAGTCGCAGGGAGCGGATGGCCCAGGATCCGGATCA
GGAGCGGGAGCTGGAGCAGGAGCAGGAGCTGGGGAGGATGGGCCGCACGA
GGTCTACCGCCGACTAACAAACGCCGAGGGCGAGCTGCTCGAGGACGACA
CATTCGATGCGACACAAATGCTCAACCAACGACAGCCCAGGCAGCAGAGG
CAATCAATCAAAAGCAGTTTCCGCGACAAGGATAAACCGTCAAGGTTCAA
GGATCTGCAAACGACGACCCGCTTCCAGGTGGATCCCCAAAATGAGGAGT
CCGACGAGTCCAATGACTCGCAGGAGGAGCGCGAGCTGCTGGACAACGAG
TACGACACAAAATATGGTAAAAGTTTCCGGCATTTCACCAGAGAGGCGTT
ACCCCGCCTGGACAACTACCGCAACATGATGTCCATCCAGGCGGCCTACC
GTCCAACGCTCGACGAGCTGCATAACGCCACGCTGGTGGGCAAGAACACG
CACAGCTTGACACGTAATCAGGACCCGGAGTCGGGCATCCTGAATGGGGT
CCTGAAATTCGGTTGGATCAAAGGTGTGCTCGTCCGCTGCCTGCTGAACA
TCTGGGGCGTGATGCTGTTCCTCCGGCTCAGCTGGGTGGTGGGTCAGGCG
GGCGTCATCGAGGGATTCGTATTAATTCTGACAACGACTGCTGTCACGAC
CATCACGGCCTTGTCGATGTCGGCGATAAGCACTAATGGTGTCATCAAAG
GGGGTGGCACATACTATATGATATCCCGGTCTCTGGGGCCGGAGTTTGGT
GGATCCATCGGTTTGATATTCTCCCTGGCAAATGCGGTGGCGTGTGCCAT
GTATGTGGTCGGCTTCTGCGAGTCTATGTTGGCCATGATGACGACCTTTG
GCTGGGAGATCATAGATGGTGGCGTCCAGGATGTGCGCATCATTGGTTGC
ATTACCATACTGCTGCTCCTCATCATTGTGGTCGTCGGCATGGAGTGGGA
GGCCAAGGCGCAAATCGGACTGCTCATCATCCTGTTGGTGGCCATTGGAG
ACTTTGTTATTGGCAGCTTTATCGGACCGAAGAGCGATGCGGAAATGGCC
AAGGGATTTTTGGGATATAATGCCACTTTGTTTAAGAACAACCTTTTCGC
GGACTATCGGCCGGAAAAGGGAGGCATTCAACACGATTTTTTCTCAGTGT
TTGCTATATTCTTCCCTGCCGCAACGGGCATTTTAGCTGGAGCCAATATT
TCGGGCGATCTGAAGGACCCACAAAAATCCATTCCAAAAGGCACGATCCT
GGCCATCGTTATCACCACCGGAACCTATTTGATTATGGTACTCCAGTGTG
GTGCCACAGTGGCTCGTGATGCCACGGGAAATCTTTCAGATGTCGTAAAC
GGCACCTTTGCATTCCTCGACTGTCAGCCTGGTGAATGCAATTACGGCTT
GCAAAACTCATTTCAAGTAATTGAGTTGGTATCCGCGTTTGGCCCTCTGA
TTTACGCCGGTTGCTATGCTGCCACGTTATCCTCGGCATTGGCCAGTTTG
GTGTCTGCCCCGAAGGTCTTCCAGGCTCTGTGCAAGGATGAGCTGTATCC
GAAGATTGTGTGGTTTGCCAAAGGTTATGGCAAGAATAATGAGCCAGTTC
GTGGCTATGTGTTAACTTTCATCATCGCCTGTGCCTTCATTTTGATTGGC
GAACTGAACCTGATTGCCCCGCTCATTTCGAACTTCTTCCTGGCCGCCTA
CATGTTGATCAACTTCAGTACCTTCCATGCCAGTCTGGCCAAGCCAGTGG
GCTGGCGACCGACCTTTAAGTATTACAATATGTGGCTGAGCCTGTTGGGC
GCCATCCTCTGTGTGGCCGTCATGTTCCTCATCTCGTGGGCCACAGCGCT
CATCACCTTTGCCGCCGTGCTGGCTCTGTACTTAATTGTGGCCTACCGGA
AACCGGATGTCAACTGGGGCTCCACCACCCAGGCTCAGACGTACAAGAAC
GCCCTGATGTCGGTGCAGCAGCTGAACAATGTGGAGGAGCACGTGAAGAA
CTACCGGCCACAGATCCTGGTTCTTTCCGGTTTGCCCAACACACGGCCGG
TGCTCGTCGACTTGGCTTACATGCTAACCAAGAATTTATCCCTGCTCGTC
TGTGGTCACGTTCTGAAAGGTTCCAGCTCGCAGAAGTACCGGACATATCT
GCAGGAAAGGGCGGGCAATTGGTTCCGGAAGCATCGCGTTAAGGGCTTCT
ATGCCCTGGTGGATGGTGAGGACTTTGAGTCCGGCACTCGGGCTCTGATG
CAAGCAACTGGTATTGGAAAACTTAAGCCGAACATCATCCTGATGGGCTA
CAAGACTGACTGGCAGACGTGCGATCACAAGGAGCTGGATCAGTACTTCA
ATGTGATGCACAAGGCACTGGACATGTACCTATCCGTGGCCATTTTGCGT
GTGCCCCAGGGTCTGGACTGTTCGCAGGTGCTGGGCTCGCAGGATGGTTG
GAAGACCGTTTCGGATGTGCCGAGAACCCTGCAGCCAAACGAGAGTTCCG
GGGATCTGCAGGCGGTGGACAGTAGTGTCAGGAACGGTTTAAGTGGCAGC
ATTGATTCACTCAGCAGAAATGTATCGCAAGCCTCCAGCACGAGTGACCT
GTCCTTTATAGCGGGCAATCAATCGAAGGATGTTTCCGGCATGCCCGATC
CCCTGGATGCCAAATCGGCCAATCTTGTGAGCAATTCGTTGCGCAAGTCC
AAGCTGAAGCACGATGATCCGGCTTCCCTCTACAAGGGTCCTGGTGGTGC
CGAGCTGCCCAAGGAGGTACTGGCGGACCTTACCCAATTCACGAGAAAAC
GCAGCCACGCCGTCATCGATGTCTGGTGGTTGTACGATGACGGAGGACTC
ACTCTCCTCTTGCCCTACATCATCAGTACGCGGCGCACCTGGCAATCCTG
CAAATTGAGAGTTTACGCGCTGGCTAACAAAAATTCGGAATTGGAGTTCG
AGCAGCGCTCAATGGCCAGTTTGCTGTCGAAATTCCGGATCGATTACTCG
GATTTAACACTGATTCCGGATATAACGAAGAAGCCCCAGGAAACATCCAC
GCAGTTCTTTAATGAGCTGATTAAGGACTTTGTTGTTACCGAAAAGGATG
GCGAGAATGGCACCAGCAGCAGGGCAACTCTCAACGAGGACGATGCCCTC
ATAACCGACGATGATCTGTTGGCGGTGCAGGACAAGACGAATCGGTATTT
GCGGCTGCGGGAGTACCTGCGGGAGCAGTCGACCAAGTCGGACCTCGTGG
TGATGACCCTGCCGATGCCACGGAAGAACATCGTCTCCGCACCCCTCTAC
ATGGCCTGGCTGGAGAGCCTGAGTCGGGACATGCCGCCCTTCCTTTTTGT
GCGCGGCAATCAGACGAGTGTGCTGACCTTCTACTCGTAGAAGGAATATA
AATACTGTTCTAGAAGTCGAGTTAAATTCATATTTAAATGCAGTGCTAAT
AATTTTTAAAAAAAAAAAAAAAAAAA

GH27027.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:20:20
Subject Length Description Subject Range Query Range Score Percent Strand
Ncc69-RA 3969 Ncc69-RA 41..3951 1..3911 19555 100 Plus
Ncc69-RB 4181 Ncc69-RB 368..4181 94..3907 19070 100 Plus
Ncc69.a 4311 Ncc69.a 368..3305 94..3031 14690 100 Plus
Ncc69.a 4311 Ncc69.a 3412..4293 3030..3911 4410 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:41:12
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 12362388..12363200 3031..2219 4005 99.5 Minus
chr3L 24539361 chr3L 12369767..12370273 600..94 2535 100 Minus
chr3L 24539361 chr3L 12359280..12359592 3907..3595 1520 99 Minus
chr3L 24539361 chr3L 12364917..12365180 1156..893 1320 100 Minus
chr3L 24539361 chr3L 12364588..12364843 1408..1153 1250 99.2 Minus
chr3L 24539361 chr3L 12359683..12359920 3595..3358 1190 100 Minus
chr3L 24539361 chr3L 12360561..12360791 3359..3129 1155 100 Minus
chr3L 24539361 chr3L 12367078..12367260 780..598 900 99.5 Minus
chr3L 24539361 chr3L 12363982..12364151 1833..1664 850 100 Minus
chr3L 24539361 chr3L 12363768..12363912 1975..1831 725 100 Minus
chr3L 24539361 chr3L 12364206..12364350 1666..1522 695 98.6 Minus
chr3L 24539361 chr3L 12363261..12363396 2220..2085 680 100 Minus
chr3L 24539361 chr3L 12366633..12366748 894..779 580 100 Minus
chr3L 24539361 chr3L 12363599..12363711 2084..1972 550 99.1 Minus
chr3L 24539361 chr3L 12364417..12364533 1522..1406 540 97.4 Minus
chr3L 24539361 chr3L 12360859..12360958 3129..3030 485 99 Minus
chr3L 24539361 chr3L 12381915..12381996 94..1 255 87.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:10:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:41:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12371761..12372573 3031..2219 4065 100 Minus
3L 28110227 3L 12379138..12379644 600..94 2535 100 Minus
3L 28110227 3L 12368642..12368958 3911..3595 1585 100 Minus
3L 28110227 3L 12374285..12374548 1156..893 1320 100 Minus
3L 28110227 3L 12373956..12374211 1408..1153 1280 100 Minus
3L 28110227 3L 12369049..12369286 3595..3358 1190 100 Minus
3L 28110227 3L 12369937..12370167 3359..3129 1155 100 Minus
3L 28110227 3L 12376436..12376618 780..598 915 100 Minus
3L 28110227 3L 12373353..12373522 1833..1664 850 100 Minus
3L 28110227 3L 12373139..12373283 1975..1831 725 100 Minus
3L 28110227 3L 12373577..12373721 1666..1522 725 100 Minus
3L 28110227 3L 12372634..12372769 2220..2085 680 100 Minus
3L 28110227 3L 12373785..12373901 1522..1406 585 100 Minus
3L 28110227 3L 12376001..12376116 894..779 580 100 Minus
3L 28110227 3L 12372970..12373082 2084..1972 565 100 Minus
3L 28110227 3L 12370235..12370334 3129..3030 500 100 Minus
3L 28110227 3L 12391322..12391415 94..1 470 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:49:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 12364861..12365673 3031..2219 4065 100 Minus
3L 28103327 3L 12372238..12372744 600..94 2535 100 Minus
3L 28103327 3L 12361742..12362058 3911..3595 1585 100 Minus
3L 28103327 3L 12367385..12367648 1156..893 1320 100 Minus
3L 28103327 3L 12367056..12367311 1408..1153 1280 100 Minus
3L 28103327 3L 12362149..12362386 3595..3358 1190 100 Minus
3L 28103327 3L 12363037..12363267 3359..3129 1155 100 Minus
3L 28103327 3L 12369536..12369718 780..598 915 100 Minus
3L 28103327 3L 12366453..12366622 1833..1664 850 100 Minus
3L 28103327 3L 12366677..12366821 1666..1522 725 100 Minus
3L 28103327 3L 12366239..12366383 1975..1831 725 100 Minus
3L 28103327 3L 12365734..12365869 2220..2085 680 100 Minus
3L 28103327 3L 12366885..12367001 1522..1406 585 100 Minus
3L 28103327 3L 12369101..12369216 894..779 580 100 Minus
3L 28103327 3L 12366070..12366182 2084..1972 565 100 Minus
3L 28103327 3L 12363335..12363434 3129..3030 500 100 Minus
3L 28103327 3L 12384422..12384515 94..1 470 100 Minus
Blast to na_te.dros performed on 2019-03-16 01:41:10 has no hits.

GH27027.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:42:07 Download gff for GH27027.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 12359280..12359591 3596..3907 99 <- Minus
chr3L 12359683..12359918 3360..3595 100 <- Minus
chr3L 12360561..12360790 3130..3359 100 <- Minus
chr3L 12360859..12360956 3032..3129 98 <- Minus
chr3L 12362388..12363198 2221..3031 99 <- Minus
chr3L 12363261..12363396 2085..2220 100 <- Minus
chr3L 12363599..12363708 1975..2084 99 <- Minus
chr3L 12363769..12363911 1832..1974 100 <- Minus
chr3L 12363984..12364149 1666..1831 100 <- Minus
chr3L 12364207..12364349 1523..1665 98 <- Minus
chr3L 12364417..12364531 1408..1522 97 <- Minus
chr3L 12364589..12364842 1154..1407 99 <- Minus
chr3L 12364920..12365178 895..1153 100 <- Minus
chr3L 12366633..12366747 780..894 100 <- Minus
chr3L 12367079..12367258 600..779 99 <- Minus
chr3L 12369768..12370273 94..599 100 <- Minus
chr3L 12381916..12381967 39..93 92   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:43:33 Download gff for GH27027.complete
Subject Subject Range Query Range Percent Splice Strand
Ncc69-RB 1..3516 325..3840 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:26:41 Download gff for GH27027.complete
Subject Subject Range Query Range Percent Splice Strand
Ncc69-RB 1..3516 325..3840 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:08:32 Download gff for GH27027.complete
Subject Subject Range Query Range Percent Splice Strand
Ncc69-RA 1..3516 325..3840 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:01:50 Download gff for GH27027.complete
Subject Subject Range Query Range Percent Splice Strand
Ncc69-RB 1..3516 325..3840 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:39:48 Download gff for GH27027.complete
Subject Subject Range Query Range Percent Splice Strand
Ncc69-RA 1..3516 325..3840 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:43:33 Download gff for GH27027.complete
Subject Subject Range Query Range Percent Splice Strand
Ncc69-RA 25..3931 1..3907 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:26:40 Download gff for GH27027.complete
Subject Subject Range Query Range Percent Splice Strand
Ncc69-RA 25..3931 1..3907 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:08:32 Download gff for GH27027.complete
Subject Subject Range Query Range Percent Splice Strand
Ncc69-RA 30..3936 1..3907 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:01:50 Download gff for GH27027.complete
Subject Subject Range Query Range Percent Splice Strand
Ncc69-RA 25..3931 1..3907 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:39:48 Download gff for GH27027.complete
Subject Subject Range Query Range Percent Splice Strand
Ncc69-RA 30..3936 1..3907 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:42:07 Download gff for GH27027.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12373140..12373282 1832..1974 100 <- Minus
3L 12373355..12373520 1666..1831 100 <- Minus
3L 12373578..12373720 1523..1665 100 <- Minus
3L 12373785..12373899 1408..1522 100 <- Minus
3L 12369049..12369284 3360..3595 100 <- Minus
3L 12369937..12370166 3130..3359 100 <- Minus
3L 12368646..12368957 3596..3907 100 <- Minus
3L 12370235..12370332 3032..3129 100 <- Minus
3L 12371761..12372571 2221..3031 100 <- Minus
3L 12372634..12372769 2085..2220 100 <- Minus
3L 12372970..12373079 1975..2084 100 <- Minus
3L 12373957..12374210 1154..1407 100 <- Minus
3L 12374288..12374546 895..1153 100 <- Minus
3L 12376001..12376115 780..894 100 <- Minus
3L 12376437..12376616 600..779 100 <- Minus
3L 12379139..12379644 94..599 100 <- Minus
3L 12391323..12391415 1..93 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:42:07 Download gff for GH27027.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12373140..12373282 1832..1974 100 <- Minus
3L 12373355..12373520 1666..1831 100 <- Minus
3L 12373578..12373720 1523..1665 100 <- Minus
3L 12373785..12373899 1408..1522 100 <- Minus
3L 12369049..12369284 3360..3595 100 <- Minus
3L 12369937..12370166 3130..3359 100 <- Minus
3L 12368646..12368957 3596..3907 100 <- Minus
3L 12370235..12370332 3032..3129 100 <- Minus
3L 12371761..12372571 2221..3031 100 <- Minus
3L 12372634..12372769 2085..2220 100 <- Minus
3L 12372970..12373079 1975..2084 100 <- Minus
3L 12373957..12374210 1154..1407 100 <- Minus
3L 12374288..12374546 895..1153 100 <- Minus
3L 12376001..12376115 780..894 100 <- Minus
3L 12376437..12376616 600..779 100 <- Minus
3L 12379139..12379644 94..599 100 <- Minus
3L 12391323..12391415 1..93 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:42:07 Download gff for GH27027.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12373140..12373282 1832..1974 100 <- Minus
3L 12373355..12373520 1666..1831 100 <- Minus
3L 12373578..12373720 1523..1665 100 <- Minus
3L 12373785..12373899 1408..1522 100 <- Minus
3L 12369049..12369284 3360..3595 100 <- Minus
3L 12369937..12370166 3130..3359 100 <- Minus
3L 12368646..12368957 3596..3907 100 <- Minus
3L 12370235..12370332 3032..3129 100 <- Minus
3L 12371761..12372571 2221..3031 100 <- Minus
3L 12372634..12372769 2085..2220 100 <- Minus
3L 12372970..12373079 1975..2084 100 <- Minus
3L 12373957..12374210 1154..1407 100 <- Minus
3L 12374288..12374546 895..1153 100 <- Minus
3L 12376001..12376115 780..894 100 <- Minus
3L 12376437..12376616 600..779 100 <- Minus
3L 12379139..12379644 94..599 100 <- Minus
3L 12391323..12391415 1..93 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:08:32 Download gff for GH27027.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12367057..12367310 1154..1407 100 <- Minus
arm_3L 12367388..12367646 895..1153 100 <- Minus
arm_3L 12369101..12369215 780..894 100 <- Minus
arm_3L 12369537..12369716 600..779 100 <- Minus
arm_3L 12364861..12365671 2221..3031 100 <- Minus
arm_3L 12365734..12365869 2085..2220 100 <- Minus
arm_3L 12366070..12366179 1975..2084 100 <- Minus
arm_3L 12366240..12366382 1832..1974 100 <- Minus
arm_3L 12366455..12366620 1666..1831 100 <- Minus
arm_3L 12366678..12366820 1523..1665 100 <- Minus
arm_3L 12366885..12366999 1408..1522 100 <- Minus
arm_3L 12361746..12362057 3596..3907 100 <- Minus
arm_3L 12362149..12362384 3360..3595 100 <- Minus
arm_3L 12363037..12363266 3130..3359 100 <- Minus
arm_3L 12363335..12363432 3032..3129 100 <- Minus
arm_3L 12372239..12372744 94..599 100 <- Minus
arm_3L 12384423..12384515 1..93 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:35:00 Download gff for GH27027.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12363037..12363266 3130..3359 100 <- Minus
3L 12363335..12363432 3032..3129 100 <- Minus
3L 12362149..12362384 3360..3595 100 <- Minus
3L 12361746..12362057 3596..3907 100 <- Minus
3L 12364861..12365671 2221..3031 100 <- Minus
3L 12365734..12365869 2085..2220 100 <- Minus
3L 12366070..12366179 1975..2084 100 <- Minus
3L 12366240..12366382 1832..1974 100 <- Minus
3L 12366455..12366620 1666..1831 100 <- Minus
3L 12366678..12366820 1523..1665 100 <- Minus
3L 12366885..12366999 1408..1522 100 <- Minus
3L 12367057..12367310 1154..1407 100 <- Minus
3L 12367388..12367646 895..1153 100 <- Minus
3L 12369101..12369215 780..894 100 <- Minus
3L 12369537..12369716 600..779 100 <- Minus
3L 12372239..12372744 94..599 100 <- Minus
3L 12384423..12384515 1..93 100   Minus

GH27027.pep Sequence

Translation from 324 to 3839

> GH27027.pep
MSDTISFELGSAADRPPNRFQVNPVNGNSRKSQGADGPGSGSGAGAGAGA
GAGEDGPHEVYRRLTNAEGELLEDDTFDATQMLNQRQPRQQRQSIKSSFR
DKDKPSRFKDLQTTTRFQVDPQNEESDESNDSQEERELLDNEYDTKYGKS
FRHFTREALPRLDNYRNMMSIQAAYRPTLDELHNATLVGKNTHSLTRNQD
PESGILNGVLKFGWIKGVLVRCLLNIWGVMLFLRLSWVVGQAGVIEGFVL
ILTTTAVTTITALSMSAISTNGVIKGGGTYYMISRSLGPEFGGSIGLIFS
LANAVACAMYVVGFCESMLAMMTTFGWEIIDGGVQDVRIIGCITILLLLI
IVVVGMEWEAKAQIGLLIILLVAIGDFVIGSFIGPKSDAEMAKGFLGYNA
TLFKNNLFADYRPEKGGIQHDFFSVFAIFFPAATGILAGANISGDLKDPQ
KSIPKGTILAIVITTGTYLIMVLQCGATVARDATGNLSDVVNGTFAFLDC
QPGECNYGLQNSFQVIELVSAFGPLIYAGCYAATLSSALASLVSAPKVFQ
ALCKDELYPKIVWFAKGYGKNNEPVRGYVLTFIIACAFILIGELNLIAPL
ISNFFLAAYMLINFSTFHASLAKPVGWRPTFKYYNMWLSLLGAILCVAVM
FLISWATALITFAAVLALYLIVAYRKPDVNWGSTTQAQTYKNALMSVQQL
NNVEEHVKNYRPQILVLSGLPNTRPVLVDLAYMLTKNLSLLVCGHVLKGS
SSQKYRTYLQERAGNWFRKHRVKGFYALVDGEDFESGTRALMQATGIGKL
KPNIILMGYKTDWQTCDHKELDQYFNVMHKALDMYLSVAILRVPQGLDCS
QVLGSQDGWKTVSDVPRTLQPNESSGDLQAVDSSVRNGLSGSIDSLSRNV
SQASSTSDLSFIAGNQSKDVSGMPDPLDAKSANLVSNSLRKSKLKHDDPA
SLYKGPGGAELPKEVLADLTQFTRKRSHAVIDVWWLYDDGGLTLLLPYII
STRRTWQSCKLRVYALANKNSELEFEQRSMASLLSKFRIDYSDLTLIPDI
TKKPQETSTQFFNELIKDFVVTEKDGENGTSSRATLNEDDALITDDDLLA
VQDKTNRYLRLREYLREQSTKSDLVVMTLPMPRKNIVSAPLYMAWLESLS
RDMPPFLFVRGNQTSVLTFYS*

GH27027.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:55:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24985-PA 1184 GF24985-PA 1..1184 1..1171 5710 91.3 Plus
Dana\GF17705-PA 1066 GF17705-PA 73..1066 144..1171 2530 48.2 Plus
Dana\GF12875-PA 1058 GF12875-PA 2..812 125..864 892 29.9 Plus
Dana\GF14838-PA 931 GF14838-PA 62..652 213..809 665 30.3 Plus
Dana\GF21265-PA 717 GF21265-PA 96..461 212..617 624 34.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:55:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13837-PA 1177 GG13837-PA 1..1177 1..1171 6193 98.3 Plus
Dere\GG10986-PA 1068 GG10986-PA 75..1068 144..1171 2497 47.5 Plus
Dere\GG22903-PA 1074 GG22903-PA 4..827 116..864 913 30.3 Plus
Dere\GG21702-PA 941 GG21702-PA 28..659 185..809 641 28.7 Plus
Dere\GG12705-PA 699 GG12705-PA 92..456 212..617 612 33.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:55:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16072-PA 1162 GH16072-PA 1..1162 1..1171 5175 85 Plus
Dgri\GH18994-PA 1077 GH18994-PA 3..1077 18..1171 2487 43.8 Plus
Dgri\GH20188-PA 1066 GH20188-PA 4..819 116..864 899 30.3 Plus
Dgri\GH10529-PA 946 GH10529-PA 57..734 199..848 640 28.5 Plus
Dgri\GH11901-PA 715 GH11901-PA 90..455 212..617 618 34.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:57
Subject Length Description Subject Range Query Range Score Percent Strand
Ncc69-PG 1171 CG4357-PG 1..1171 1..1171 6033 100 Plus
Ncc69-PA 1171 CG4357-PA 1..1171 1..1171 6033 100 Plus
Ncc69-PF 1191 CG4357-PF 1..1191 1..1171 5999 98.2 Plus
Ncc69-PD 1191 CG4357-PD 1..1191 1..1171 5999 98.2 Plus
Ncc69-PC 1191 CG4357-PC 1..1191 1..1171 5999 98.2 Plus
Ncc69-PE 1207 CG4357-PE 1..1207 1..1171 5986 97 Plus
NKCC-PB 1068 CG31547-PB 81..1068 150..1171 2423 48.1 Plus
NKCC-PA 995 CG31547-PA 12..995 154..1171 2418 48.2 Plus
kcc-PA 1043 CG5594-PA 4..827 116..864 890 29.9 Plus
kcc-PD 1074 CG5594-PD 4..827 116..864 890 29.9 Plus
kcc-PE 1074 CG5594-PE 4..827 116..864 890 29.9 Plus
kcc-PF 1066 CG5594-PF 4..819 116..864 884 30 Plus
kcc-PB 1028 CG5594-PB 2..812 125..864 876 29.3 Plus
kcc-PC 1059 CG5594-PC 2..812 125..864 876 29.3 Plus
kcc-PG 1077 CG5594-PG 2..812 125..864 876 29.3 Plus
CG10413-PB 941 CG10413-PB 29..659 186..809 652 28.3 Plus
CG10413-PA 941 CG10413-PA 29..659 186..809 652 28.3 Plus
CG12773-PB 711 CG12773-PB 91..455 212..617 620 33.7 Plus
CG12773-PC 712 CG12773-PC 92..456 212..617 620 33.7 Plus
CG12773-PA 712 CG12773-PA 92..456 212..617 620 33.7 Plus
kcc-PA 1043 CG5594-PA 819..1043 981..1171 204 25.7 Plus
kcc-PB 1028 CG5594-PB 804..1028 981..1171 204 25.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12335-PA 1112 GI12335-PA 1..1112 1..1171 4833 82.1 Plus
Dmoj\GI24495-PA 1074 GI24495-PA 3..1074 18..1171 2491 44 Plus
Dmoj\GI17197-PA 947 GI17197-PA 61..665 199..809 637 29.2 Plus
Dmoj\GI15632-PA 714 GI15632-PA 90..455 212..617 617 33.9 Plus
Dmoj\GI20717-PA 1066 GI20717-PA 362..819 397..864 606 32.5 Plus
Dmoj\GI20717-PA 1066 GI20717-PA 4..277 116..382 372 34.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:55:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24962-PA 942 GL24962-PA 1..693 1..700 3170 87.7 Plus
Dper\GL22161-PA 1062 GL22161-PA 69..1062 144..1171 2500 47.8 Plus
Dper\GL24962-PA 942 GL24962-PA 691..942 878..1171 937 67.6 Plus
Dper\GL11178-PA 1059 GL11178-PA 2..812 125..864 901 30.5 Plus
Dper\GL14385-PA 719 GL14385-PA 90..455 212..617 625 34.5 Plus
Dper\GL18742-PA 630 GL18742-PA 1..350 437..809 395 27.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:55:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18131-PA 1187 GA18131-PA 1..1187 1..1171 5547 88.8 Plus
Dpse\GA16316-PA 1062 GA16316-PA 3..1062 18..1171 2505 44.7 Plus
Dpse\GA16316-PB 995 GA16316-PB 12..995 154..1171 2487 48 Plus
Dpse\GA18994-PA 1059 GA18994-PA 2..812 125..864 901 30.5 Plus
Dpse\GA10302-PA 941 GA10302-PA 28..661 185..809 640 28.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:55:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24663-PA 1171 GM24663-PA 1..1171 1..1171 6069 97.2 Plus
Dsec\GM10628-PA 1061 GM10628-PA 75..1061 144..1171 2416 46.8 Plus
Dsec\GM16063-PA 1074 GM16063-PA 4..827 116..864 912 30.3 Plus
Dsec\GM17082-PA 943 GM17082-PA 28..661 185..809 625 28.5 Plus
Dsec\GM18981-PA 542 GM18981-PA 92..456 212..617 603 33.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:55:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12726-PA 1167 GD12726-PA 1..1167 1..1171 6190 99 Plus
Dsim\GD19613-PA 1053 GD19613-PA 75..1053 144..1171 2330 45.1 Plus
Dsim\GD21827-PA 921 GD21827-PA 28..639 185..809 557 27.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:55:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12226-PA 1179 GJ12226-PA 1..1179 1..1171 5120 83.1 Plus
Dvir\GJ24561-PA 1081 GJ24561-PA 3..1081 18..1171 2513 43.9 Plus
Dvir\GJ21885-PA 1067 GJ21885-PA 4..820 116..864 887 29.9 Plus
Dvir\GJ19803-PA 944 GJ19803-PA 58..662 199..809 634 29.7 Plus
Dvir\GJ19220-PA 714 GJ19220-PA 90..455 212..617 622 34 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:55:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12754-PA 1189 GK12754-PA 1..1189 1..1171 5374 87.3 Plus
Dwil\GK14023-PA 1081 GK14023-PA 51..1081 118..1171 2488 46.3 Plus
Dwil\GK15715-PA 1067 GK15715-PA 4..820 116..864 910 31.1 Plus
Dwil\GK24654-PA 936 GK24654-PA 57..653 199..809 660 29.2 Plus
Dwil\GK16364-PA 728 GK16364-PA 95..460 212..617 626 34.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:55:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20127-PA 1177 GE20127-PA 1..1177 1..1171 6196 98.1 Plus
Dyak\GE25275-PA 1068 GE25275-PA 75..1068 144..1171 2515 47.7 Plus
Dyak\GE14341-PA 1074 GE14341-PA 4..827 116..864 912 30.3 Plus
Dyak\GE12725-PA 941 GE12725-PA 28..659 185..809 641 28.5 Plus
Dyak\GE16533-PA 717 GE16533-PA 92..456 212..617 612 33.7 Plus

GH27027.hyp Sequence

Translation from 324 to 3839

> GH27027.hyp
MSDTISFELGSAADRPPNRFQVNPVNGNSRKSQGADGPGSGSGAGAGAGA
GAGEDGPHEVYRRLTNAEGELLEDDTFDATQMLNQRQPRQQRQSIKSSFR
DKDKPSRFKDLQTTTRFQVDPQNEESDESNDSQEERELLDNEYDTKYGKS
FRHFTREALPRLDNYRNMMSIQAAYRPTLDELHNATLVGKNTHSLTRNQD
PESGILNGVLKFGWIKGVLVRCLLNIWGVMLFLRLSWVVGQAGVIEGFVL
ILTTTAVTTITALSMSAISTNGVIKGGGTYYMISRSLGPEFGGSIGLIFS
LANAVACAMYVVGFCESMLAMMTTFGWEIIDGGVQDVRIIGCITILLLLI
IVVVGMEWEAKAQIGLLIILLVAIGDFVIGSFIGPKSDAEMAKGFLGYNA
TLFKNNLFADYRPEKGGIQHDFFSVFAIFFPAATGILAGANISGDLKDPQ
KSIPKGTILAIVITTGTYLIMVLQCGATVARDATGNLSDVVNGTFAFLDC
QPGECNYGLQNSFQVIELVSAFGPLIYAGCYAATLSSALASLVSAPKVFQ
ALCKDELYPKIVWFAKGYGKNNEPVRGYVLTFIIACAFILIGELNLIAPL
ISNFFLAAYMLINFSTFHASLAKPVGWRPTFKYYNMWLSLLGAILCVAVM
FLISWATALITFAAVLALYLIVAYRKPDVNWGSTTQAQTYKNALMSVQQL
NNVEEHVKNYRPQILVLSGLPNTRPVLVDLAYMLTKNLSLLVCGHVLKGS
SSQKYRTYLQERAGNWFRKHRVKGFYALVDGEDFESGTRALMQATGIGKL
KPNIILMGYKTDWQTCDHKELDQYFNVMHKALDMYLSVAILRVPQGLDCS
QVLGSQDGWKTVSDVPRTLQPNESSGDLQAVDSSVRNGLSGSIDSLSRNV
SQASSTSDLSFIAGNQSKDVSGMPDPLDAKSANLVSNSLRKSKLKHDDPA
SLYKGPGGAELPKEVLADLTQFTRKRSHAVIDVWWLYDDGGLTLLLPYII
STRRTWQSCKLRVYALANKNSELEFEQRSMASLLSKFRIDYSDLTLIPDI
TKKPQETSTQFFNELIKDFVVTEKDGENGTSSRATLNEDDALITDDDLLA
VQDKTNRYLRLREYLREQSTKSDLVVMTLPMPRKNIVSAPLYMAWLESLS
RDMPPFLFVRGNQTSVLTFYS*

GH27027.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:39:04
Subject Length Description Subject Range Query Range Score Percent Strand
Ncc69-PG 1171 CG4357-PG 1..1171 1..1171 6033 100 Plus
Ncc69-PA 1171 CG4357-PA 1..1171 1..1171 6033 100 Plus
Ncc69-PF 1191 CG4357-PF 1..1191 1..1171 5999 98.2 Plus
Ncc69-PD 1191 CG4357-PD 1..1191 1..1171 5999 98.2 Plus
Ncc69-PC 1191 CG4357-PC 1..1191 1..1171 5999 98.2 Plus