BDGP Sequence Production Resources |
Search the DGRC for GH27208
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 272 |
Well: | 8 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4641-RA |
Protein status: | GH27208.pep: wuzgold |
Preliminary Size: | 2017 |
Sequenced Size: | 2728 |
Gene | Date | Evidence |
---|---|---|
CG4641 | 2001-01-01 | Release 2 assignment |
CG4641 | 2001-10-10 | Blastp of sequenced clone |
CG4641 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4641 | 2008-04-29 | Release 5.5 accounting |
CG4641 | 2008-08-15 | Release 5.9 accounting |
CG4641 | 2008-12-18 | 5.12 accounting |
2728 bp (2728 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060805
> GH27208.complete AAAAAATATACAATATATATTCAGTATAAGGTTTTTATCAACCTGTTTAC AACTATTCCCTAAAGACATTTAAATCAAATCTATACATAATATTTTAATA AAGAAAAGCCCTTGTTCTATGTATATATTTCAATCCTATCGGTTTACACC TGTAGCTCAGTAGTAGTTATCAGACTGAATTTGGAAAGCAAAGACTTTAT ATGAAACCCTAGTTTTCTAACGATCTCCTCCCGCATGCTTGTCAACCTCC AATCTGAATAAATGTAACCGAAAATTATACTTTTGCTAAAGTTTTCAGTT TTTTTTTTAGTTTCCAATTGCCAAACCTAATCGTGTACTTAGATAGTTTT TGTTCCAAGGCTGCCTTGGCTTGATCCAAAATATTTTTGGTTTCCTTCTC ACCGCTCTATAACATTTGGATCGATAAAATTGTATTCATATAAGATATAG CATTCCGAAAATATGATTGATACTAAGCCAACAAATCTTTTCTCATTTAT TTTTAACGCATACTCAGTACTCATCCAAGAGCCTGGCATGGAGGACGATC TCAGTGACGATGGGCAGCCGCCGCCGTCCTTGCCGCCGCCCCAACTAGCG AAGGCGGGCGGATCCGCTCCTGGATCTGGGAGCAAGGTCGAAAAGGGGGC GGCGGCAGGTGGCGCCAACACGCTGAACTTAGGTATGGCACAAATAATTG TTACCGCTGCAACCCCCATGGTTGAAGACGGTGCCGATAAATCTTTCCCA CCAGTAGGCGAGAGCGATGCACAGCCAGTGGAGCCGGTGTCCAAGGAGCA GCCGGCGGAAGTGGCCAAAAAGCCAGATATTGCGCCCAAGCCGCTGGCCA AGGTGGCGCCACAGAGCGCGCCGGCCAAAGAAGGTAATGCTGGAGTGAGG CCCGTGGTGAGCATTACACTGACCGAGTATCCATCCTGTGATGCAGAGGA CCAACAGTCCTTCTCGGAGGGCACCGATTCGGCTTCGGTTGCCGATGTGC CGGTACTGCAGGATGCGGAGGATCCATTCAACGAGAAGGCCAAGGGAGAG TCCGGCGACGGTTCGGGATTTGAGGCCAATTTTGAGGCCAACTTCGATGC CAATTTTGATGACGCCTTCGCTGGAATCGGAGGAGGTGGGGGCGGTGGAG GTGGCGGTGGGGAGCAGTCCAACGAATTGGACATCAACGGAGAGGCAGCA GGAGAAGCAATAGTATCTGGATCTGCGGCTGGCGATGAGGATATTGAGGC ACCCAAACAGGTGGTCGGTGGGCGAGCTAGCATACCCGAGGAATTGGACT CAAATCAATTGGCACGTTTGCAAAATCTGAAGGAGTCGAACGCTTAGATT CGGAGCTCCGGTCTCTACCTCTTGGTCGGCACTTCAATATTGTTTCTTTT GTTCTTTTAGGCACACTACCATGAGCATGAAATATACTATGTAGACTATA GCCACGGACAGTTATAGAGCGGATCAGCGGAACACCACAGCCACAGCCAC AACCACAACCAAATCCCAAAACACTCGATAGCATTTTGATCTCACACTCA TCCCACAACCTATCCAACAAATCCAAACACACAGATGATATAGCCAGACT CAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTG GTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTA CATACAACGACACGAATAGCAGGATATAGAATATATGTATGTACTTAAAT CAGATCGGGATTCCCGCTCCCAACTTCACGTACAGCGCTCAAATTGTGTA CATCCATTTGAATACTTCTTCTGACTGCCTCTGGGGTTATAGTTAGACAT CAACTGGGCCTTCATAAACAAAACCACCATACGATATATATTATAACTAT ATAAATATATACATAATTATGTTAGTTTGTAATGTGTTATAACCTCGGAC ACGTATGGAATACATTAATATATATATATATATATATATATATATATATA TAAATGGCATATTGTAACGTTTTGAAAGACAACAATTACTTATGTAGCAC TCAGACACGGGTCTTCGAATATCAGCATCCACAACTAATCGAGCAATAAT ATGTATATATATCTAAGTGAATTAGAAAATCCAGTTTAGCAGCATTAAGT TAGCCATTCGCTTGAACTTGCCGCCGCTAACAAAAGCCAATCAATTTCAA GGTCAATTCAGTTGGACTTATTTCCCGCTTCTGTTCGCTCCACTTAGTCA TAGGATCTCTGCACATCTCTGCATAGTAAATTAATCGAAGCCGATGACGA GCGGATCCGTCAGATATATATTGTTGTAATTGTATGCAAAACACTAGCCT AATTAGTTAAATGTTTTCCGTGTCTAGTAAAATGGTCTAAGTTAATGTTG GATGCCAGAAAGAAGATATTTGAAATATTAGTAAAAAAGCCTAATCAATG CGATACTTTGTTTGCGATACTCGTCGAATAGTAAAGTTCATAACTCACCA ATTGGATAACTTCATATTCACATAACCGATATTACCGATAACAATGGATA ACAATGATGAAAACCCAATATATATGTACGTATGTAAGTCGCAAACTGAA TTGTATGTAATTTTTGACCCCGCCCAGTGAGTTAATCAATGTTTTAAGTC ATAGTTTACAAAACCTTCTGTTCGAAAAACAAATAACAAATAAAATTTCC ACCTTAAAGCAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9134598..9135141 | 1..543 | 98 | -> | Plus |
chr3L | 9135345..9137517 | 544..2710 | 94 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4641-RA | 1..885 | 463..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4641-RA | 1..885 | 463..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nwk-RD | 2375..3207 | 515..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4641-RA | 1..885 | 463..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nwk-RD | 2375..3207 | 515..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4641-RA | 1..2710 | 1..2710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4641-RA | 1..2710 | 1..2710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nwk-RF | 2711..5420 | 1..2710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4641-RA | 1..2710 | 1..2710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nwk-RF | 2711..5420 | 1..2710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9142781..9143323 | 1..543 | 100 | -> | Plus |
3L | 9143527..9145693 | 544..2710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9142781..9143323 | 1..543 | 100 | -> | Plus |
3L | 9143527..9145693 | 544..2710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9142781..9143323 | 1..543 | 100 | -> | Plus |
3L | 9143527..9145693 | 544..2710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9135881..9136423 | 1..543 | 100 | -> | Plus |
arm_3L | 9136627..9138793 | 544..2710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9135881..9136423 | 1..543 | 100 | -> | Plus |
3L | 9136627..9138793 | 544..2710 | 100 | Plus |
Translation from 462 to 1346
> GH27208.hyp MIDTKPTNLFSFIFNAYSVLIQEPGMEDDLSDDGQPPPSLPPPQLAKAGG SAPGSGSKVEKGAAAGGANTLNLGMAQIIVTAATPMVEDGADKSFPPVGE SDAQPVEPVSKEQPAEVAKKPDIAPKPLAKVAPQSAPAKEGNAGVRPVVS ITLTEYPSCDAEDQQSFSEGTDSASVADVPVLQDAEDPFNEKAKGESGDG SGFEANFEANFDANFDDAFAGIGGGGGGGGGGGEQSNELDINGEAAGEAI VSGSAAGDEDIEAPKQVVGGRASIPEELDSNQLARLQNLKESNA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nwk-PK | 1049 | CG43479-PK | 773..1049 | 18..294 | 1412 | 99.6 | Plus |
nwk-PG | 1068 | CG43479-PG | 793..1068 | 19..294 | 1411 | 100 | Plus |
nwk-PD | 1068 | CG43479-PD | 793..1068 | 19..294 | 1411 | 100 | Plus |
nwk-PJ | 1056 | CG43479-PJ | 773..1039 | 18..284 | 1364 | 99.6 | Plus |
nwk-PI | 1075 | CG43479-PI | 793..1058 | 19..284 | 1363 | 100 | Plus |
Translation from 462 to 1346
> GH27208.pep MIDTKPTNLFSFIFNAYSVLIQEPGMEDDLSDDGQPPPSLPPPQLAKAGG SAPGSGSKVEKGAAAGGANTLNLGMAQIIVTAATPMVEDGADKSFPPVGE SDAQPVEPVSKEQPAEVAKKPDIAPKPLAKVAPQSAPAKEGNAGVRPVVS ITLTEYPSCDAEDQQSFSEGTDSASVADVPVLQDAEDPFNEKAKGESGDG SGFEANFEANFDANFDDAFAGIGGGGGGGGGGGEQSNELDINGEAAGEAI VSGSAAGDEDIEAPKQVVGGRASIPEELDSNQLARLQNLKESNA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20135-PA | 293 | GF20135-PA | 41..293 | 57..294 | 697 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14378-PA | 293 | GG14378-PA | 1..293 | 1..294 | 1135 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15843-PA | 310 | GH15843-PA | 1..310 | 9..294 | 636 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nwk-PK | 1049 | CG43479-PK | 773..1049 | 18..294 | 1412 | 99.6 | Plus |
nwk-PG | 1068 | CG43479-PG | 793..1068 | 19..294 | 1411 | 100 | Plus |
nwk-PD | 1068 | CG43479-PD | 793..1068 | 19..294 | 1411 | 100 | Plus |
nwk-PJ | 1056 | CG43479-PJ | 773..1039 | 18..284 | 1364 | 99.6 | Plus |
nwk-PI | 1075 | CG43479-PI | 793..1058 | 19..284 | 1363 | 100 | Plus |
nwk-PL | 1031 | CG43479-PL | 770..1014 | 19..284 | 1221 | 92.1 | Plus |
nwk-PB | 1000 | CG43479-PB | 770..1000 | 19..294 | 1112 | 83.7 | Plus |
nwk-PH | 1006 | CG43479-PH | 770..989 | 19..284 | 1059 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12626-PA | 278 | GI12626-PA | 1..278 | 26..294 | 514 | 56.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18424-PA | 282 | GL18424-PA | 1..282 | 26..294 | 741 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA29290-PA | 307 | GA29290-PA | 9..307 | 9..294 | 811 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25122-PA | 293 | GM25122-PA | 1..293 | 1..294 | 1404 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14158-PA | 293 | GD14158-PA | 1..293 | 1..294 | 1402 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12747-PA | 264 | GJ12747-PA | 1..264 | 26..294 | 618 | 61.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23693-PA | 922 | GK23693-PA | 785..918 | 18..146 | 248 | 60.7 | Plus |
Dwil\GK23698-PA | 38 | GK23698-PA | 3..38 | 259..294 | 180 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20809-PA | 269 | GE20809-PA | 1..269 | 26..294 | 987 | 93.3 | Plus |