Clone GH27234 Report

Search the DGRC for GH27234

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:272
Well:34
Vector:pOT2
Associated Gene/TranscriptCG33791-RB
Protein status:GH27234.pep: gold
Preliminary Size:5061
Sequenced Size:5636

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7934 2001-01-01 Release 2 assignment
CG18170 2001-01-01 Release 2 assignment
CG13918 2001-01-01 Release 2 assignment
CG32316 2001-09-19 Blastp of sequenced clone
CG32316 2003-01-01 Sim4 clustering to Release 3
CG33791 2008-04-29 Release 5.5 accounting
CG33791 2008-08-15 Release 5.9 accounting
CG18170 2008-08-15 Release 5.9 accounting
CG18170 2008-12-18 5.12 accounting
CG33791 2008-12-18 5.12 accounting

Clone Sequence Records

GH27234.complete Sequence

5636 bp (5636 high quality bases) assembled on 2001-09-19

GenBank Submission: AY060348

> GH27234.complete
ATTTTTTGGACCGTAAAGTGCAAAATTTTCATATGATCTGTGTCAAAAGA
ATGCCGTGGAGCAATGTTCGCATATTTCTGAAGCTCGCTTCCCAGCGATG
CCAGCTCCTAAGTGTGGGCTCCATCCAAGAGGCGTCTGCAGGACACCGAT
CGGGCTCCTTCGAATCGGATGCCCTGTCGAGCACTTCGAATGCCAGGCAC
ATGGAGTGCCTGTTCGCCAAGTGGCTGGGGGACACTAGCTCGGTCAATGG
AACCTGGCAGAATTTCTTCAAGGGAATGGTAGAGAAACAAATAGACTCGC
AACCGCCTCGGAATAAAGAAGCAGAAGGAGATGTTCTTCCCTCGATAGGA
ACCACAACGCCAACAGATGCAGCGATTGGGGCTCCAGTTTTGGGAAGGAG
AAAAGCAGTCTCTTCTTCGGCACAGCAGAGTCCTTTGGACACTTCGGAAG
CGGACTTCAACAGTTGCGTGGCTCAGTCTCAAAAGCATGATATTGGAGTG
CTTTCACACTCAACGGATATCAGAACTTCTGGCATATACGACAAACAGAA
ACTGCCCACATTGCCCAAAGATGGCATTCTGAAAGGCTGTTCAATAAACG
GATCAAATATAGCCAGTGAAGCTCATTCATCGATTTTATTGGGGAATGAA
GTGGCACACAACATTTCCAAAAACTTGACCAGAAAAATGTCGCAAAAAAA
TACTCCAGACAAGCCAGAAAAACCACATAAGCATGAAGAAATCTTGACGG
GTTCCAGAAGAACCGGAAACTCGCGCAACAACTTTCAAAAGAAATTCGGC
TCATTCGAAATTTTTATGAAATTCTGGAAACACGCACATGCATTGGATAA
GTATAAGCGGCATATTGGTCCAGTAATGGTTGTGAAGAAGCGTTCAAAAA
CCAATTCAAAGCCAATTAACGTCATGTACTTCAAAAATTATTACGAAAAG
GGTTTACGTCTAAGGAAGGAAAGGTTGAATAAAATCAAAAGCAATAAGAA
AATTAAAATGCCTTCAAAAAGCCCTAAGGAGTCCGTAGCTAAAGAAATCA
TTGAAAATGCCAATATACCACAATCTCACCCAGAAACAAAGAAATCCACA
TATGTTTCAAAACACAAGAGCGATACATATGCGACCCTTGAGGAACTGAT
CAACGATATTGATGACATCGCCATAAATGAGAAGTTGTCTGAATCGATTG
AGCCAGTGAAAACCAAGAAAGACAGTAAAACACCGAAGCTGTTGGAGAAC
ACTCCCAAAAAGAAGCCAAAGAATTTCAAAACGGCACTTAGGGTTTTCAA
GCCCGAAGAGAAGGTTATCCCAAAATCGGATAATATGCCGAGCTCAAATA
TCAAGCCCAATCCCGTTTCCAAGTTGGACAAATCCAAATTAAGTAAGCCG
AAGACTGAAAAATACATTCCTTTGAGGGTTTTCAATACACCAAAAGAAGA
CGAAGACAAGTCATGGATATATTGGGATGAGTTGGCAGTGAAAAGCCTGC
GAAAACCAACTCAAGACTAGCACTTCATCCTCAGAAACCCAAGAAGGAAG
TTGGGCAGCCTCTTCATCCTTTGAACTGAAACTAACCTAACGAATCTCAG
CACGTCTTGCCACAAGTGATTCCTACTATGAGCTGATCTCACAACTTTCT
CAGCCTTCGAACCCTAAGCACCAAATTCAAAATTTAACAGGTATTTCGGT
AGTCCCTTCTAGAACATGAACCAATGTCGTCTGAGGAGCCTGGCGCGGAT
CAGGAGGAGCCTGACACTGGGTTTGCGGGGAACTGACCAACACGTCCTCG
CCCGTCAAGCCCTCCGCACCATTCAAACGACCTCACAGCGGCGAGGTGTC
CATGATCTGGACTCCTTCGCCAATGGATGCAGTGCCGCCTACATCGAGGG
ACTCTACAACAAGTGGAAGCGCAATCCCAGTTCCGTAGATGAGTCCTGGA
ACGAGCTCTTCAGCAGCAACGATTGGTCCAGCCCCAAGAGAAGTCCTCTT
CAGGTTTCGCACTCCCGGAAGTACAGACGTCCTCCGGTTGAAAGGATAGC
TGTGAAGGCTCGGTCGGGCGAAAGGACGGCTTCCGGTGGCGCATCTGCAG
CTCCAGCCGCACCTCCCAGCGACTGGAAGAACATTGATGACCACCACGTG
ATCCAGGCCATCATCCGTGCCTATCAATCGCGCGGTCACTTGGCCGCCGA
TCTGGATCCCTTGGGTATTGTTGGTCCGAAGAAGCGTACGTCGGTGGATG
GCACCCAGCGACATGCCGCCAGGGAGGTGCTCCGCCAGCACTTCTCCTAT
ATATTTAATGACCTCAATACCGTGTTCAAGTTGCCCTCATCCACAATGAT
AGGCGGTGATCAGGAATTTCTGTCACTAAAAGAGATCCTGGATCGCTTGG
AGCGCATCTATTGCGGCCACATTGGAGTGGAGTACATGCAGATCACGTCG
TTGACAAAGACCAACTGGCTTCGCGACCGTTTCGAGAAGCCTGGAGGCCT
GGACTTGACCAAGGAGGAAAAGAAGCTCATCCTAGAGCGTCTCACTCGCT
CGACGGGATTCGAAAACTTCCTGGCGAAAAAGTTCTCGTCGGAGAAGCGT
TTCGGACTGGAGGGATGCGACATTATGATACCCGCTATAAAGGAGGTGGT
TGACCGGGCCACGGACCATGGCGTGGAGTCAATTTTAATAGGAATGGCGC
ATCGAGGGCGCCTCAATGTCCTCGCCAACATCTGTCGCAAGCCCATTTCG
GACATCCTGTCTCAGTTCCACGGCTTGCAGGCCACCGATTCCGGATCTGG
CGACGTTAAGTACCATCTGGGCGTGTTTCAAGAGCGGCTCAACCGACAGA
CAAACCGCATGGTGCGCATCACCGTGGTGGCGAATCCCTCTCACTTGGAG
CACGTCAACCCGGTGCTCCTGGGTAAGGCCCGAGCGGAGATGTTCCAACG
GGGCGACACATGTGGCAGCACGGTGATGCCCATCATTATCCACGGAGATG
CCTCCTTTTCCGGTCAGGGCGTGGTCTACGAATCAATGCATCTGTCCGAC
TTGCCCAACTACACCACCTACGGCACCATTCACATTGTGTCCAACAACCA
GGTGGGCTTCACGACAGATCCGCGTTTCTCCCGCTCCTCGCGCTACTGCA
CGGACGTTGCCAAGGTGGTGAATGCTCCGATACTGCACGTGAATGCGGAC
GATCCGGAGGCGTGCATCCAGTGCGCTCGCATTGCCATCGACTATCGGAC
ACGATTCAAGAAGGATGTGGTCATCGACATAGTTGGCTACCGACGCAACG
GGCACAATGAGGCGGATGAACCCATGTTCACCCAGCCGCTGATGTACCAG
CGCATAAAAAAACTGAAGCCATGCCTCCAGCTCTACGCCGATAAGTTGAT
CAAGGAGGGAGTCGTCACGGATAGCGAGTTCAAGGCAATGGTGTCAAGCT
ACGAAAAGATCTGCGAGGACGCTTGGGCCAAGTCCAAGACCATCAAGACC
ATAAAGTATTCCTCTTGGATCGACTCTCCCTGGCCAGGATTCTTCGAGGG
TCGCGATCGCCTGAAACTGTGCCCCACTGGCATCAGCACGGACACCCTGA
AGACGATTGGCAACATGTTCTCGACTCCTCCGCCGCCGGAGCACAAGTTC
GAGACACACAAGGGCATCCTTCGCATACTGGCCCAGCGCACGCAGATGGT
GCAGGACAAAGTGGCTGACTGGTCGCTGGGCGAGGCCTTCGCCTTCGGCT
CGCTCCTTAAGGAGGGCATCCACGTTCGACTATCCGGCCAAGATGTGGAG
CGCGGCACCTTTTCGCACCGGCACCACGTCCTGCACCACCAGTCGGAGGA
CAAGGTGGTGTACAACTCACTGGACCACCTCTATCCCGACCAGGCGCCCT
ACTCCGTCTCCAACAGCTCCCTGTCGGAGTGTGCGGTCCTTGGCTTCGAG
CACGGCTACTCCATGGCCAGTCCCAATGCTCTGGTCATGTGGGAAGGCCA
GTTTGGGGACTTCTGCAACACGGCGCAGTGCATCATCGACACGTTCATAG
CCAGCGGCGAAACCAAGTGGGTGCGCCAGTCCGGAGTCGTCATGTTGCTG
CCACACAGCATGGAGGGCATGGGCCCGGAGCACTCTTCCGGCCGCATTGA
GCGCTTCCTGCAGATGAGCGACGACGATCCGGACGTCTATCCGGATACCT
GCGACGCTGACTTTGTGGCTCGCCAGCTAATGAATGTCAACTGGATTGTG
ACGAATCTCTCCACGCCCGCAAATCTGTTCCACTGCCTGCGCCGCCAGGT
GAAGATGGGCTTCCGGAAGCCGCTGATTAACTTCTCGCCCAAGTCACTGC
TCCGCCATCCGCTGGCGCGAAGTCCCTTCAAGGACTTCAACGAGTGCAGT
TGCTTCCAGCGCATCATTCCCGACAAAGGACCCGCCGGCAAGCAGCCCGA
CTGCGTCCAGAAGCTGGTCTTCTGCTCGGGAAAGGTCTACTACGATCTCG
TCAAGGAGCGCGACGATCACGAGCAGGTGGAGACGGTGGCCCTGGTGAGG
GTGGAACAGGTGAGACGCCTCCCAACGCGACACCTCTTCTTGTTCATGAT
AACCATGATTGGGCGCATCCTCCAGCTCTGTCCCTTCCCCTACGACCTGA
TCAGCCAGCAGCTGGAGCTGTATCCCAAGGCGGAGCTGCTGTGGGCCCAG
GAGGAGCACAAGAACATGGGCGCCTGGTCTTACGTGCAGCCGCGTTTCGA
CACGGCGCTCCTCAAGAACGAAAACGAATCGCGCTGCGTGTCCTATCACG
GACGACCGCCCAGCGCCTCGCCAGCGACGGGCAACAAGGTGCAGCACTAC
AACGAGTACAAGGCCCTGATCACAAGCATCTTCGGAGAGCTGACGCCGGA
GAACAAGAAGCGAATCGAGGATCGGATCAAGAAGCAGCAGGCAAAGGCCA
AGGCGGATGCGCAATCGAAACCCAGTACTAAGCCACCAGCCGCTCCACCA
AAGGGCGGTTCGTCGCCGCCACCAGGTAAGGGCGAATCTGGAGGAAAAAA
GAGATCCGATTCGTCTCCATCTGCGTCTATAGCTCCTACAGGTCCAGCAC
CCCGTAAGCCACTGATCAGTCTGCCAAGTAGACCTCCAAGGGGTGGAAAG
CAGCGGTCCGGCTCGGCTCCAGCTCCTAATCTGGTTGATGAAGATTCAGC
TGCTCGAAATAGGGAACCAGATGCTTCTGCATATGATGGCGCATCACCGT
CAGCTTGGAAGAGATCGGGCTCTGCTCCAGCACCGAGTGTAGTTCCCAGG
GCATCGGCCTCCCGCAGTCCGTCTAGAAAGTCACCTTCACCCTCTCACGA
CGGCATATCTCCTTCTACAAGACAAGAATCCTTAAGCAAAAAGAAATCAG
GGTCGGCTCCAGCTCCGACGCCAACTTCTCGTGGACCATTCCGGACTGCG
CCCTCCAATACAGAATTCATAAAGCGCAGACCTGCTAAAGATTACGGCAG
TAGAAATGAAACCCAAAGCACTCCCGGGGAGTCGGAACTGGACCCAACAA
AACCACAGCCCTAGTTTGAATCCTCCTTTGTAAGTCCACCAATAAAGATA
GGTAATAGTTACAGAAAGAAAAAAAAAAAAAAAAAA

GH27234.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:59:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG18170-RA 5663 CG18170-RA 46..5663 1..5618 28090 100 Plus
CG33791-RB 5663 CG33791-RB 46..5663 1..5618 28090 100 Plus
CG33791-RF 5540 CG33791-RF 46..4604 1..4559 22795 100 Plus
CG33791-RF 5540 CG33791-RF 5003..5540 5081..5618 2690 100 Plus
CG33791-RF 5540 CG33791-RF 4602..5004 4623..5025 2015 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:35:37
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 1603024..1604606 344..1943 7350 97.4 Plus
chr3L 24539361 chr3L 1606720..1607833 3662..4781 5310 98.5 Plus
chr3L 24539361 chr3L 1605633..1606450 2689..3506 4045 99.6 Plus
chr3L 24539361 chr3L 1616103..1616940 4781..5618 3995 98.4 Plus
chr3L 24539361 chr3L 1604707..1605072 1942..2307 1740 98.4 Plus
chr3L 24539361 chr3L 1605271..1605582 2381..2692 1455 97.8 Plus
chr3L 24539361 chr3L 1602566..1602816 1..251 1240 99.6 Plus
chr3L 24539361 chr3L 16953346..16953834 3696..4184 915 79.1 Plus
chr3L 24539361 chr3L 1606508..1606665 3505..3662 760 98.7 Plus
chr3L 24539361 chr3L 1602874..1602966 252..344 435 97.8 Plus
chr3L 24539361 chr3L 16952564..16952803 2972..3211 390 77.5 Plus
chr3L 24539361 chr3L 1605139..1605208 2308..2377 335 98.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:10:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:35:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1603457..1605056 344..1943 8000 100 Plus
3L 28110227 3L 1607170..1608289 3662..4781 5600 100 Plus
3L 28110227 3L 1616518..1617370 4781..5633 4205 99.5 Plus
3L 28110227 3L 1606083..1606900 2689..3506 4090 100 Plus
3L 28110227 3L 1605157..1605522 1942..2307 1830 100 Plus
3L 28110227 3L 1605721..1606032 2381..2692 1560 100 Plus
3L 28110227 3L 1602999..1603249 1..251 1255 100 Plus
3L 28110227 3L 16963904..16964392 3696..4184 915 79.1 Plus
3L 28110227 3L 1606958..1607115 3505..3662 790 100 Plus
3L 28110227 3L 1603307..1603399 252..344 465 100 Plus
3L 28110227 3L 16963122..16963361 2972..3211 390 77.5 Plus
3L 28110227 3L 1605589..1605661 2308..2380 365 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:17:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 1603457..1605056 344..1943 8000 100 Plus
3L 28103327 3L 1607170..1608289 3662..4781 5600 100 Plus
3L 28103327 3L 1616518..1617370 4781..5633 4205 99.5 Plus
3L 28103327 3L 1606083..1606900 2689..3506 4090 100 Plus
3L 28103327 3L 1605157..1605522 1942..2307 1830 100 Plus
3L 28103327 3L 1605721..1606032 2381..2692 1560 100 Plus
3L 28103327 3L 1602999..1603249 1..251 1255 100 Plus
3L 28103327 3L 16957004..16957492 3696..4184 915 79.1 Plus
3L 28103327 3L 1606958..1607115 3505..3662 790 100 Plus
3L 28103327 3L 1603307..1603399 252..344 465 100 Plus
3L 28103327 3L 16956222..16956461 2972..3211 390 77.5 Plus
3L 28103327 3L 1605589..1605661 2308..2380 365 100 Plus
3L 28103327 3L 16957988..16958046 4690..4748 145 83 Plus
Blast to na_te.dros performed 2019-03-16 07:35:35
Subject Length Description Subject Range Query Range Score Percent Strand
412 7567 412 412 7567bp 6135..6204 656..587 125 64.3 Minus

GH27234.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:36:37 Download gff for GH27234.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 1602566..1602816 1..251 99 -> Plus
chr3L 1602874..1602966 252..344 97 -> Plus
chr3L 1603025..1604606 345..1943 97 -> Plus
chr3L 1604709..1605072 1944..2307 98 -> Plus
chr3L 1605139..1605211 2308..2380 97 -> Plus
chr3L 1605271..1605581 2381..2691 97 -> Plus
chr3L 1605636..1606450 2692..3506 99 -> Plus
chr3L 1606510..1606664 3507..3661 98 -> Plus
chr3L 1606720..1607832 3662..4780 98 -> Plus
chr3L 1616103..1616940 4781..5618 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:12:00 Download gff for GH27234.complete
Subject Subject Range Query Range Percent Splice Strand
CG33791-RB 1..3849 1716..5564 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:58:29 Download gff for GH27234.complete
Subject Subject Range Query Range Percent Splice Strand
CG33791-RB 1..3849 1716..5564 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:08:06 Download gff for GH27234.complete
Subject Subject Range Query Range Percent Splice Strand
CG33791-RD 1..3849 1716..5564 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:41:39 Download gff for GH27234.complete
Subject Subject Range Query Range Percent Splice Strand
CG33791-RB 1..3849 1716..5564 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:34:07 Download gff for GH27234.complete
Subject Subject Range Query Range Percent Splice Strand
CG33791-RD 1..3849 1716..5564 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:11:59 Download gff for GH27234.complete
Subject Subject Range Query Range Percent Splice Strand
CG33791-RB 46..5663 1..5618 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:58:29 Download gff for GH27234.complete
Subject Subject Range Query Range Percent Splice Strand
CG18170-RA 46..5663 1..5618 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:08:06 Download gff for GH27234.complete
Subject Subject Range Query Range Percent Splice Strand
CG33791-RB 46..5663 1..5618 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:41:39 Download gff for GH27234.complete
Subject Subject Range Query Range Percent Splice Strand
CG33791-RB 46..5663 1..5618 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:34:07 Download gff for GH27234.complete
Subject Subject Range Query Range Percent Splice Strand
CG18170-RA 46..5663 1..5618 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:36:37 Download gff for GH27234.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1605721..1606031 2381..2691 100 -> Plus
3L 1602999..1603249 1..251 100 -> Plus
3L 1603307..1603399 252..344 100 -> Plus
3L 1603458..1605056 345..1943 100 -> Plus
3L 1605159..1605522 1944..2307 100 -> Plus
3L 1605589..1605661 2308..2380 100 -> Plus
3L 1606086..1606900 2692..3506 100 -> Plus
3L 1606960..1607114 3507..3661 100 -> Plus
3L 1607170..1608288 3662..4780 100 -> Plus
3L 1616518..1617355 4781..5618 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:36:37 Download gff for GH27234.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1605721..1606031 2381..2691 100 -> Plus
3L 1602999..1603249 1..251 100 -> Plus
3L 1603307..1603399 252..344 100 -> Plus
3L 1603458..1605056 345..1943 100 -> Plus
3L 1605159..1605522 1944..2307 100 -> Plus
3L 1605589..1605661 2308..2380 100 -> Plus
3L 1606086..1606900 2692..3506 100 -> Plus
3L 1606960..1607114 3507..3661 100 -> Plus
3L 1607170..1608288 3662..4780 100 -> Plus
3L 1616518..1617355 4781..5618 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:36:37 Download gff for GH27234.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1605721..1606031 2381..2691 100 -> Plus
3L 1602999..1603249 1..251 100 -> Plus
3L 1603307..1603399 252..344 100 -> Plus
3L 1603458..1605056 345..1943 100 -> Plus
3L 1605159..1605522 1944..2307 100 -> Plus
3L 1605589..1605661 2308..2380 100 -> Plus
3L 1606086..1606900 2692..3506 100 -> Plus
3L 1606960..1607114 3507..3661 100 -> Plus
3L 1607170..1608288 3662..4780 100 -> Plus
3L 1616518..1617355 4781..5618 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:08:06 Download gff for GH27234.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1602999..1603249 1..251 100 -> Plus
arm_3L 1603307..1603399 252..344 100 -> Plus
arm_3L 1603458..1605056 345..1943 100 -> Plus
arm_3L 1605159..1605522 1944..2307 100 -> Plus
arm_3L 1605589..1605661 2308..2380 100 -> Plus
arm_3L 1605721..1606031 2381..2691 100 -> Plus
arm_3L 1606086..1606900 2692..3506 100 -> Plus
arm_3L 1606960..1607114 3507..3661 100 -> Plus
arm_3L 1607170..1608288 3662..4780 100 -> Plus
arm_3L 1616518..1617355 4781..5618 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:24:51 Download gff for GH27234.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1603307..1603399 252..344 100 -> Plus
3L 1606960..1607114 3507..3661 100 -> Plus
3L 1602999..1603249 1..251 100 -> Plus
3L 1606086..1606900 2692..3506 100 -> Plus
3L 1603458..1605056 345..1943 100 -> Plus
3L 1605159..1605522 1944..2307 100 -> Plus
3L 1605589..1605661 2308..2380 100 -> Plus
3L 1605721..1606031 2381..2691 100 -> Plus
3L 1607170..1608288 3662..4780 100 -> Plus
3L 1616518..1617355 4781..5618 100   Plus

GH27234.pep Sequence

Translation from 1715 to 5563

> GH27234.pep
MNQCRLRSLARIRRSLTLGLRGTDQHVLARQALRTIQTTSQRRGVHDLDS
FANGCSAAYIEGLYNKWKRNPSSVDESWNELFSSNDWSSPKRSPLQVSHS
RKYRRPPVERIAVKARSGERTASGGASAAPAAPPSDWKNIDDHHVIQAII
RAYQSRGHLAADLDPLGIVGPKKRTSVDGTQRHAAREVLRQHFSYIFNDL
NTVFKLPSSTMIGGDQEFLSLKEILDRLERIYCGHIGVEYMQITSLTKTN
WLRDRFEKPGGLDLTKEEKKLILERLTRSTGFENFLAKKFSSEKRFGLEG
CDIMIPAIKEVVDRATDHGVESILIGMAHRGRLNVLANICRKPISDILSQ
FHGLQATDSGSGDVKYHLGVFQERLNRQTNRMVRITVVANPSHLEHVNPV
LLGKARAEMFQRGDTCGSTVMPIIIHGDASFSGQGVVYESMHLSDLPNYT
TYGTIHIVSNNQVGFTTDPRFSRSSRYCTDVAKVVNAPILHVNADDPEAC
IQCARIAIDYRTRFKKDVVIDIVGYRRNGHNEADEPMFTQPLMYQRIKKL
KPCLQLYADKLIKEGVVTDSEFKAMVSSYEKICEDAWAKSKTIKTIKYSS
WIDSPWPGFFEGRDRLKLCPTGISTDTLKTIGNMFSTPPPPEHKFETHKG
ILRILAQRTQMVQDKVADWSLGEAFAFGSLLKEGIHVRLSGQDVERGTFS
HRHHVLHHQSEDKVVYNSLDHLYPDQAPYSVSNSSLSECAVLGFEHGYSM
ASPNALVMWEGQFGDFCNTAQCIIDTFIASGETKWVRQSGVVMLLPHSME
GMGPEHSSGRIERFLQMSDDDPDVYPDTCDADFVARQLMNVNWIVTNLST
PANLFHCLRRQVKMGFRKPLINFSPKSLLRHPLARSPFKDFNECSCFQRI
IPDKGPAGKQPDCVQKLVFCSGKVYYDLVKERDDHEQVETVALVRVEQVR
RLPTRHLFLFMITMIGRILQLCPFPYDLISQQLELYPKAELLWAQEEHKN
MGAWSYVQPRFDTALLKNENESRCVSYHGRPPSASPATGNKVQHYNEYKA
LITSIFGELTPENKKRIEDRIKKQQAKAKADAQSKPSTKPPAAPPKGGSS
PPPGKGESGGKKRSDSSPSASIAPTGPAPRKPLISLPSRPPRGGKQRSGS
APAPNLVDEDSAARNREPDASAYDGASPSAWKRSGSAPAPSVVPRASASR
SPSRKSPSPSHDGISPSTRQESLSKKKSGSAPAPTPTSRGPFRTAPSNTE
FIKRRPAKDYGSRNETQSTPGESELDPTKPQP*

GH27234.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:59:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10423-PA 1173 GF10423-PA 1..1062 1..1098 4317 73.1 Plus
Dana\GF23946-PA 1117 GF23946-PA 53..984 51..1025 3310 62.6 Plus
Dana\GF18418-PA 920 GF18418-PA 60..918 150..1056 1352 34.9 Plus
Dana\GF13932-PA 179 GF13932-PA 1..98 241..358 279 46.6 Plus
Dana\GF23405-PA 950 GF23405-PA 33..145 213..358 261 40.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:59:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14806-PA 1229 GG14806-PA 1..1228 1..1281 5754 86.1 Plus
Dere\GG13594-PA 1113 GG13594-PA 36..985 27..1026 3328 62.1 Plus
Dere\GG11794-PA 919 GG11794-PA 59..917 149..1056 1351 34.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:59:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16621-PA 989 GH16621-PA 48..988 48..1021 3633 67.5 Plus
Dgri\GH16325-PA 1016 GH16325-PA 53..1011 51..1053 3393 62.9 Plus
Dgri\GH13978-PA 924 GH13978-PA 122..922 225..1056 1295 35.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:02:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG33791-PB 1282 CG33791-PB 1..1282 1..1282 6763 100 Plus
CG33791-PD 1282 CG33791-PD 1..1282 1..1282 6763 100 Plus
CG33791-PF 1241 CG33791-PF 1..1241 1..1282 6496 96.8 Plus
CG33791-PE 1241 CG33791-PE 1..1241 1..1282 6496 96.8 Plus
CG33791-PC 1238 CG33791-PC 1..1238 1..1282 6477 96.6 Plus
CG33791-PA 1238 CG33791-PA 1..1238 1..1282 6477 96.6 Plus
Nc73EF-PF 1017 CG11661-PF 36..1011 27..1052 3266 61.8 Plus
Nc73EF-PH 1017 CG11661-PH 36..1011 27..1052 3266 61.8 Plus
Nc73EF-PA 1008 CG11661-PA 36..1002 27..1052 3184 60.8 Plus
Nc73EF-PB 1008 CG11661-PB 36..1002 27..1052 3184 60.8 Plus
Nc73EF-PC 1008 CG11661-PC 36..1002 27..1052 3184 60.8 Plus
Nc73EF-PG 1008 CG11661-PG 36..1002 27..1052 3184 60.8 Plus
Nc73EF-PJ 1105 CG11661-PJ 36..988 27..1038 3123 60.4 Plus
Nc73EF-PI 1105 CG11661-PI 36..988 27..1038 3123 60.4 Plus
CG1544-PA 919 CG1544-PA 56..917 146..1056 1327 34 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:59:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12468-PA 1169 GI12468-PA 9..1166 28..1208 3928 60.9 Plus
Dmoj\GI13269-PA 1110 GI13269-PA 53..984 51..1026 3346 63.2 Plus
Dmoj\GI22321-PA 924 GI22321-PA 60..922 150..1056 1359 34.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:59:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20804-PA 1307 GL20804-PA 236..1294 47..1128 4286 71.2 Plus
Dper\GL13542-PA 923 GL13542-PA 62..921 149..1056 1350 34.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:59:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16827-PA 1448 GA16827-PA 377..1435 47..1128 4290 72 Plus
Dpse\GA11127-PA 1116 GA11127-PA 53..994 51..1034 3299 62 Plus
Dpse\GA13730-PA 923 GA13730-PA 62..921 149..1056 1352 34.3 Plus
Dpse\GA13730-PB 738 GA13730-PB 1..736 286..1056 1258 36.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:59:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14428-PA 1237 GM14428-PA 1..1237 1..1282 6123 92.3 Plus
Dsec\GM25677-PA 1111 GM25677-PA 36..985 27..1026 3310 61.6 Plus
Dsec\GM12925-PA 919 GM12925-PA 59..917 149..1056 1354 34.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:59:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17620-PA 1000 GD17620-PA 1..1000 1..1022 5214 94.1 Plus
Dsim\GD14681-PA 1112 GD14681-PA 36..985 27..1026 3322 61.8 Plus
Dsim\GD21563-PA 906 GD21563-PA 59..904 149..1056 1293 34 Plus
Dsim\GD13630-PA 263 GD13630-PA 5..263 1023..1282 1041 91.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:59:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12039-PA 1115 GJ12039-PA 53..984 51..1026 3309 62.5 Plus
Dvir\GJ10508-PA 926 GJ10508-PA 63..924 150..1056 1353 34 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:59:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20459-PA 1182 GK20459-PA 1..1073 1..1089 4278 71.6 Plus
Dwil\GK17139-PA 1115 GK17139-PA 36..985 27..1026 3308 61.4 Plus
Dwil\GK22616-PA 922 GK22616-PA 58..920 150..1056 1347 33.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:59:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21169-PA 1217 GE21169-PA 1..1216 1..1281 5659 85.8 Plus
Dyak\GE19891-PA 1113 GE19891-PA 36..985 27..1026 3319 61.9 Plus
Dyak\GE10922-PA 919 GE10922-PA 59..917 149..1056 1369 35 Plus

GH27234.hyp Sequence

Translation from 1715 to 5563

> GH27234.hyp
MNQCRLRSLARIRRSLTLGLRGTDQHVLARQALRTIQTTSQRRGVHDLDS
FANGCSAAYIEGLYNKWKRNPSSVDESWNELFSSNDWSSPKRSPLQVSHS
RKYRRPPVERIAVKARSGERTASGGASAAPAAPPSDWKNIDDHHVIQAII
RAYQSRGHLAADLDPLGIVGPKKRTSVDGTQRHAAREVLRQHFSYIFNDL
NTVFKLPSSTMIGGDQEFLSLKEILDRLERIYCGHIGVEYMQITSLTKTN
WLRDRFEKPGGLDLTKEEKKLILERLTRSTGFENFLAKKFSSEKRFGLEG
CDIMIPAIKEVVDRATDHGVESILIGMAHRGRLNVLANICRKPISDILSQ
FHGLQATDSGSGDVKYHLGVFQERLNRQTNRMVRITVVANPSHLEHVNPV
LLGKARAEMFQRGDTCGSTVMPIIIHGDASFSGQGVVYESMHLSDLPNYT
TYGTIHIVSNNQVGFTTDPRFSRSSRYCTDVAKVVNAPILHVNADDPEAC
IQCARIAIDYRTRFKKDVVIDIVGYRRNGHNEADEPMFTQPLMYQRIKKL
KPCLQLYADKLIKEGVVTDSEFKAMVSSYEKICEDAWAKSKTIKTIKYSS
WIDSPWPGFFEGRDRLKLCPTGISTDTLKTIGNMFSTPPPPEHKFETHKG
ILRILAQRTQMVQDKVADWSLGEAFAFGSLLKEGIHVRLSGQDVERGTFS
HRHHVLHHQSEDKVVYNSLDHLYPDQAPYSVSNSSLSECAVLGFEHGYSM
ASPNALVMWEGQFGDFCNTAQCIIDTFIASGETKWVRQSGVVMLLPHSME
GMGPEHSSGRIERFLQMSDDDPDVYPDTCDADFVARQLMNVNWIVTNLST
PANLFHCLRRQVKMGFRKPLINFSPKSLLRHPLARSPFKDFNECSCFQRI
IPDKGPAGKQPDCVQKLVFCSGKVYYDLVKERDDHEQVETVALVRVEQVR
RLPTRHLFLFMITMIGRILQLCPFPYDLISQQLELYPKAELLWAQEEHKN
MGAWSYVQPRFDTALLKNENESRCVSYHGRPPSASPATGNKVQHYNEYKA
LITSIFGELTPENKKRIEDRIKKQQAKAKADAQSKPSTKPPAAPPKGGSS
PPPGKGESGGKKRSDSSPSASIAPTGPAPRKPLISLPSRPPRGGKQRSGS
APAPNLVDEDSAARNREPDASAYDGASPSAWKRSGSAPAPSVVPRASASR
SPSRKSPSPSHDGISPSTRQESLSKKKSGSAPAPTPTSRGPFRTAPSNTE
FIKRRPAKDYGSRNETQSTPGESELDPTKPQP*

GH27234.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:40:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG33791-PB 1282 CG33791-PB 1..1282 1..1282 6763 100 Plus
CG33791-PD 1282 CG33791-PD 1..1282 1..1282 6763 100 Plus
CG33791-PF 1241 CG33791-PF 1..1241 1..1282 6496 96.8 Plus
CG33791-PE 1241 CG33791-PE 1..1241 1..1282 6496 96.8 Plus
CG33791-PC 1238 CG33791-PC 1..1238 1..1282 6477 96.6 Plus