BDGP Sequence Production Resources |
Search the DGRC for GH27383
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 273 |
Well: | 83 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8861-RB |
Protein status: | GH27383.pep: gold |
Preliminary Size: | 1437 |
Sequenced Size: | 1353 |
Gene | Date | Evidence |
---|---|---|
CG8861 | 2001-01-01 | Release 2 assignment |
CG8861 | 2001-09-19 | Blastp of sequenced clone |
CG8861 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8861 | 2008-04-29 | Release 5.5 accounting |
CG8861 | 2008-08-15 | Release 5.9 accounting |
CG8861 | 2008-12-18 | 5.12 accounting |
1353 bp (1353 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060351
> GH27383.complete CTCAGACGGAACGCACGGTTTGGCGGACGCAGTTTGAAATAATTCAAAAT ATAATATTTCAATTTTAGCACGAACATCGTCGAAGATCTTTGGCAGAACC CTTTAAGCAATATAAATAAACGAAAACAACAATTAAGCTAATATATTAAC CGACTAACAACAGTAGAAACAAAGTCTTCCAAAAAGCGGAACGATTCCAC TGAGAGGAACAAAGTGAAAATTGCGATTTCAGTGAGTGCAGTTTGTCAGT TCGTCATTCTGCCCATTTGTCAGTTCGCCAGTTCGCCAACTCGCCAGTGT GTGTGTGCCAGTGTGTTAGTGAGTGTGAACTCTGCGGTAAAGGTCAGAAC TCATATGAAAATGTCGAGCGGCAACCAAGAAGCAATGTCAACAAAAGCAG CTGTCAACTCGGTGAACGTGGACGAGGACAAGGCCCCGTCAATGCATATG CATTCAACATCCTCATCAGCCCCAGGATCGATTGCGTCCAGCTACCATGT GAAAACGCTGGCCATTCTGGTGGCCATCGTCTTGTGCAGCGGCAGCTTGG GATTCGCCGACGGGCTCAAGTGCCACATGTGCGGCCAGTACAACGAGGGC GTGGGCTCCATTACGCCCTGCACCAACTACACCACGGACATTGCCCATCT CTACCTGAAGGAGTGCACCAAGAAGAGCGAGAAGTTCTGCGTGAAATATG TTAGTGAACTGTCGACCGTTCGCGATTGTGCTACCGAGTGTGTGGAAAAA GAAATTTGGGAGACACAAACGTATTGCTGCACCGAGGACGGATGCAACTC TGGCACCCAATTGGCCTACTCCGTCATCCTGTTGACCCTGCCAATCCTTT CGGTGGCTTGGCCAACATTCGTTGATTTTTGGAATACGCGACGTTAAGTG GGTCCTCAGGTGATCCAGCCAATCTTCGCTCGGTTCTTAACTTGATTTCT GTATTATTTTGCAGCAAGTGAAAAATGTATAAAATTTCAAGCGTTAGCAT TTATATTATGTTCAAAAATTTATTAAAAGCACAAACAAAATTCTGTGAAC GGGACCTAATCAAACTAAGAAGCGATTACAAGAAAAATTATCATTCGAAA CTTTTTTTTTGGAATTTATTGACTTATGCGATTTATGAAATATATATTTT GGCCAACATGTTTGCTGTTATTACTTTGAGGCTTTGTATTTCTGTCTGTC TTCCCAAAAAAACACAAAAGTGTTGGTAAATGATAAATAACGGGTGTAGA AACATCCAAAAGCTTAACTAATTCATATTCACAAGGAATAAACAATTGCA ATGCCAAATTACTACTAAAACCGTGTTAAAAAATTAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8861-RC | 1352 | CG8861-RC | 16..1352 | 1..1337 | 6685 | 100 | Plus |
CG8861-RB | 1412 | CG8861-RB | 101..1382 | 69..1350 | 6395 | 99.9 | Plus |
CG8861.e | 1604 | CG8861.e | 101..1382 | 69..1350 | 6395 | 99.9 | Plus |
CG8861-RB | 1412 | CG8861-RB | 52..100 | 1..49 | 245 | 100 | Plus |
CG8861.e | 1604 | CG8861.e | 52..100 | 1..49 | 245 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 5152430..5153073 | 693..50 | 3175 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 5120730..5121315 | 1335..750 | 2870 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 5121448..5121506 | 751..693 | 295 | 100 | Minus |
chr3R | 27901430 | chr3R | 5154207..5154255 | 49..1 | 245 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 9326688..9327331 | 693..50 | 3220 | 100 | Minus |
3R | 32079331 | 3R | 9294953..9295553 | 1350..750 | 2990 | 99.8 | Minus |
3R | 32079331 | 3R | 9295686..9295744 | 751..693 | 295 | 100 | Minus |
3R | 32079331 | 3R | 9328442..9328490 | 49..1 | 245 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 9067519..9068162 | 693..50 | 3220 | 100 | Minus |
3R | 31820162 | 3R | 9035784..9036384 | 1350..750 | 2990 | 99.8 | Minus |
3R | 31820162 | 3R | 9036517..9036575 | 751..693 | 295 | 100 | Minus |
3R | 31820162 | 3R | 9069273..9069321 | 49..1 | 245 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5120740..5121313 | 752..1325 | 99 | <- | Minus |
chr3R | 5121448..5121505 | 694..751 | 100 | <- | Minus |
chr3R | 5152430..5153073 | 50..693 | 99 | <- | Minus |
chr3R | 5154207..5154255 | 1..49 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8861-RB | 1..537 | 361..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8861-RB | 1..537 | 361..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8861-RC | 1..537 | 361..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8861-RA | 1..543 | 355..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8861-RC | 1..537 | 361..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8861-RB | 16..64 | 1..49 | 100 | == | Plus |
CG8861-RB | 65..1331 | 69..1335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8861-RC | 16..1350 | 1..1335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8861-RC | 22..1356 | 1..1335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8861-RA | 16..64 | 1..49 | 100 | == | Plus |
CG8861-RA | 65..1331 | 69..1335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8861-RC | 22..1356 | 1..1335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9294968..9295551 | 752..1335 | 100 | <- | Minus |
3R | 9295686..9295743 | 694..751 | 100 | <- | Minus |
3R | 9326688..9327331 | 50..693 | 100 | <- | Minus |
3R | 9328442..9328490 | 1..49 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9294968..9295551 | 752..1335 | 100 | <- | Minus |
3R | 9295686..9295743 | 694..751 | 100 | <- | Minus |
3R | 9326688..9327331 | 50..693 | 100 | <- | Minus |
3R | 9328442..9328490 | 1..49 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9294968..9295551 | 752..1335 | 100 | <- | Minus |
3R | 9295686..9295743 | 694..751 | 100 | <- | Minus |
3R | 9326688..9327331 | 50..693 | 100 | <- | Minus |
3R | 9328442..9328490 | 1..49 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5120690..5121273 | 752..1335 | 100 | <- | Minus |
arm_3R | 5121408..5121465 | 694..751 | 100 | <- | Minus |
arm_3R | 5152410..5153053 | 50..693 | 100 | <- | Minus |
arm_3R | 5154164..5154212 | 1..49 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9035799..9036382 | 752..1335 | 100 | <- | Minus |
3R | 9036517..9036574 | 694..751 | 100 | <- | Minus |
3R | 9067519..9068162 | 50..693 | 100 | <- | Minus |
3R | 9069273..9069321 | 1..49 | 100 | Minus |
Translation from 354 to 896
> GH27383.pep MKMSSGNQEAMSTKAAVNSVNVDEDKAPSMHMHSTSSSAPGSIASSYHVK TLAILVAIVLCSGSLGFADGLKCHMCGQYNEGVGSITPCTNYTTDIAHLY LKECTKKSEKFCVKYVSELSTVRDCATECVEKEIWETQTYCCTEDGCNSG TQLAYSVILLTLPILSVAWPTFVDFWNTRR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17774-PA | 185 | GF17774-PA | 1..185 | 1..180 | 728 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17385-PA | 184 | GG17385-PA | 1..184 | 3..180 | 793 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22350-PA | 138 | GH22350-PA | 1..134 | 30..165 | 505 | 69.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8861-PB | 178 | CG8861-PB | 1..178 | 3..180 | 950 | 100 | Plus |
CG8861-PC | 178 | CG8861-PC | 1..178 | 3..180 | 950 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23607-PA | 176 | GI23607-PA | 61..172 | 54..165 | 491 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13735-PA | 189 | GL13735-PA | 1..189 | 3..180 | 631 | 68 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21374-PB | 187 | GA21374-PB | 1..187 | 3..180 | 640 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26271-PA | 180 | GM26271-PA | 1..180 | 1..180 | 933 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20807-PA | 178 | GD20807-PA | 1..178 | 3..180 | 924 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23581-PA | 147 | GJ23581-PA | 32..143 | 54..165 | 498 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11730-PA | 192 | GK11730-PA | 1..192 | 3..180 | 646 | 62.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24789-PA | 182 | GE24789-PA | 1..182 | 3..180 | 753 | 85.2 | Plus |
Translation from 354 to 896
> GH27383.hyp MKMSSGNQEAMSTKAAVNSVNVDEDKAPSMHMHSTSSSAPGSIASSYHVK TLAILVAIVLCSGSLGFADGLKCHMCGQYNEGVGSITPCTNYTTDIAHLY LKECTKKSEKFCVKYVSELSTVRDCATECVEKEIWETQTYCCTEDGCNSG TQLAYSVILLTLPILSVAWPTFVDFWNTRR*