BDGP Sequence Production Resources |
Search the DGRC for GH27470
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 274 |
Well: | 70 |
Vector: | pOT2 |
Associated Gene/Transcript | CG13623-RA |
Protein status: | GH27470.pep: gold |
Preliminary Size: | 677 |
Sequenced Size: | 767 |
Gene | Date | Evidence |
---|---|---|
CG13623 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13623 | 2002-05-18 | Blastp of sequenced clone |
CG13623 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13623 | 2008-04-29 | Release 5.5 accounting |
CG13623 | 2008-08-15 | Release 5.9 accounting |
CG13623 | 2008-12-18 | 5.12 accounting |
767 bp (767 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118824
> GH27470.complete AAATGATCGAAAAACTACGTGTTTTTTTTTAAATTATAAAATTTAATGAA TGCAATTTGAAAGCTACATGACAATAAACTCAGTTTGAAAACGAAAACAT CACAACAGCATGTACACAAGCCTAGATGGCCCAGTTGGGATGTATCGAAC TATCGACACCTATCGTTATCGTGCGAAATCAGCTGAAATTGTTTGGATTA CGAGATAGTAAATAGAAATATTGAAATTACATTTTTTGGCTGTGAAATCG TAAAATTATGGCGTTCCTACTGCGACAAGTGGCCAGGAGCGGATTGCAAA GAAATCTAATCCTAATGCGGCATGCAACCGCTTCCACATCCGCGAATCCC GAACTTAGTGTCCAGGTGAGCGAGAGCTGCTTGAAACGGCTCCGTGAGAT CTGCGTGGATGGATCTTTCCTGCGTGTGACCGTCGAAGGAGGCGGATGCT CCGGCTTTCAGTACAAATTCGATTTGGATAAGCAGCTGAACGAGGATGAC CGACAGTTTGGCGAGGCTGAGGCCAAGGTGGTGATCGATACAGTCTCGCT GGAGTACTGCAGCGGCGCCACCGTGGACTACCATAGCGAACTAATACGCG CCGGTTTCCGGATGGTGGCCAATCCGCTGGCGGAACAGGGCTGCTCCTGC GGCTCCTCCTTCTCAATCAAATTGTAAACTTTAAACTTTAGAGAATTATT TAATACACATAGAATGTTCAGTTATAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy6 | 7826 | gypsy6 GYPSY6 7826bp | 6497..6545 | 8..56 | 119 | 71.4 | Plus |
P-element | 2907 | P-element PPI251 2907bp AKA(V01520,X69493) Derived from X06779 (g58305) (Rel. 49, Last updated, Version 8). | 1943..2054 | 271..158 | 113 | 60 | Minus |
P-element | 2907 | P-element PPI251 2907bp AKA(V01520,X69493) Derived from X06779 (g58305) (Rel. 49, Last updated, Version 8). | 2482..2553 | 184..258 | 107 | 62.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20353041..20353464 | 302..725 | 98 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13623-RA | 1..420 | 258..677 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13623-RA | 1..420 | 258..677 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13623-RA | 1..420 | 258..677 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13623-RA | 1..420 | 258..677 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13623-RA | 1..420 | 258..677 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13623-RA | 1..723 | 1..723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13623-RA | 1..725 | 1..725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13623-RA | 1..725 | 1..725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13623-RA | 1..723 | 1..723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13623-RA | 1..725 | 1..725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24529773..24530196 | 302..725 | 100 | <- | Minus |
3R | 24530258..24530558 | 1..301 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24529773..24530196 | 302..725 | 100 | <- | Minus |
3R | 24530258..24530558 | 1..301 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24529773..24530196 | 302..725 | 100 | <- | Minus |
3R | 24530258..24530558 | 1..301 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20355495..20355918 | 302..725 | 100 | <- | Minus |
arm_3R | 20355980..20356280 | 1..301 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24270604..24271027 | 302..725 | 100 | <- | Minus |
3R | 24271089..24271389 | 1..301 | 100 | Minus |
Translation from 257 to 676
> GH27470.hyp MAFLLRQVARSGLQRNLILMRHATASTSANPELSVQVSESCLKRLREICV DGSFLRVTVEGGGCSGFQYKFDLDKQLNEDDRQFGEAEAKVVIDTVSLEY CSGATVDYHSELIRAGFRMVANPLAEQGCSCGSSFSIKL*
Translation from 257 to 676
> GH27470.pep MAFLLRQVARSGLQRNLILMRHATASTSANPELSVQVSESCLKRLREICV DGSFLRVTVEGGGCSGFQYKFDLDKQLNEDDRQFGEAEAKVVIDTVSLEY CSGATVDYHSELIRAGFRMVANPLAEQGCSCGSSFSIKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20708-PA | 141 | GF20708-PA | 1..141 | 1..139 | 643 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12338-PA | 139 | GG12338-PA | 1..139 | 1..139 | 714 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18782-PA | 156 | GH18782-PA | 1..156 | 1..139 | 529 | 65.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13623-PB | 139 | CG13623-PB | 1..139 | 1..139 | 707 | 100 | Plus |
CG13623-PA | 139 | CG13623-PA | 1..139 | 1..139 | 707 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22674-PA | 151 | GI22674-PA | 1..151 | 1..139 | 556 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21975-PA | 140 | GL21975-PA | 1..140 | 1..139 | 595 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12415-PA | 140 | GA12415-PA | 1..140 | 1..139 | 595 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23479-PA | 139 | GM23479-PA | 1..139 | 1..139 | 724 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15084-PA | 139 | GD15084-PA | 1..139 | 1..139 | 721 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23401-PA | 147 | GJ23401-PA | 1..147 | 1..139 | 536 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22818-PA | 141 | GK22818-PA | 1..141 | 1..139 | 552 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10792-PA | 139 | GE10792-PA | 1..139 | 1..139 | 718 | 97.8 | Plus |