BDGP Sequence Production Resources |
Search the DGRC for GH27496
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 274 |
Well: | 96 |
Vector: | pOT2 |
Associated Gene/Transcript | CG10420-RA |
Protein status: | GH27496.pep: gold |
Preliminary Size: | 1779 |
Sequenced Size: | 1808 |
Gene | Date | Evidence |
---|---|---|
CG10420 | 2001-01-01 | Release 2 assignment |
CG10420 | 2001-09-19 | Blastp of sequenced clone |
CG10420 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10420 | 2008-04-29 | Release 5.5 accounting |
CG10420 | 2008-08-15 | Release 5.9 accounting |
CG10420 | 2008-12-18 | 5.12 accounting |
1808 bp (1808 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058471
> GH27496.complete AAAACTCTCACGAAACTTACTTAAAACCAGGTGAAATAAAGACTGAATAC ATTCTGGAGGCAAGACAAGCTGAAGCAGTATGAGTGGCAAGCAGGTAGTC ATCCTTCTGGGCAGTGTCCTGATCCTGGGATGCTTACAAGTGGCAGCGGC AACGGAAACGGATAACAAAACCAACGATTTCGTGGCCACCGACGAATGGC AGACGATTGCGGAAGGTCAAGCTATTCCAAGGGGCCTGCACGTGCGCATC AACCTACAAACGGGGCTCAAGGAAGCCAAACTCTTAGACGAAAGCGAACG TGGCACGTCGCTGCAGAGTCAACCGGATGATCAGAATGCTCGGGAATCTC ACGATGACAACGAACCCCTGGCTCTGGACTATAAACCGGACATAATCGAG GAGTCTATACGGCGGGTCAAGGAGCAGAAGAAGAGCTATGCCGAGCTACG CAAAGCGTACAAAGAGTTCCAGAAGAACTTTCGCACCGACGGAGAACTGA TCGTCCAGTTAATCGATCAGTTTCGGAACTTCAGCAGAACGCCGCTAGAG TCAGAGATGCGCTCCAAGCTGGACTGCCTGGAAAATCTGGAGTATTTGCT CCATCAGATAGACAATGCCTTGATGTTCATTGATAATGGGGGATTGGATG ATGTACTACTGCCCATTGTTGTGAACGATACCAGTACATCCCTGAGAGTG TCGGCCATGCGTGTGTTGGGCTCGCTGGCGAGCAACAATCCCAAGGCCCA GATCAAGGTGTTCGAAAAGAATTTCGGGTCTCATCTGGCTCAGATTCTGA CCAGTTCCGGAAATGTCGGTGAGATCTCCGCTGCATTGCACGCCTTTGGA GCCTTGTTGCGGAAATTTCCGCTAGCCCAGCAGCGAGTGCTTTCCACCTC GGGTACACAGGCTCTGATCAAGGTGCTCCAGAGTCCGGATGTGGAGCTGC GGAGCAAGGCGAAGGTAGTGACTCTCATAAGCGACCTAGTGCTGGAGAAG CGGTCAGTGCTGGATGTCAGCAAAGATGATCCCGAAGCCTCATCCACAAT GGCGCAATATGTGCTCTTGGACTTCGAGTCGTGGCTGAAAACGCCGGGCT ACTGCGCGGCGGTGGACACTGTGCTAACCAAGGAGTTCCTGCTCCTCCTA GAGCAACCGGAGGTGGTGGAACAGTTTGCCACCGCATTGGAGACCACCGA AGATATGTGCACCAGCACGTGGTCGCAAAGTTCCGGTCTCAGGCATGCAC TATTAACCGTTCGCAATCGGTATGCCAACAGCACGGACGAGTACCGACTG GAGGTGTCCCAGATTTTGGCCAAACTGTGCGAGAGATTGTTCAACAAGCC CAAGCACACCGAACTGTAATCCTAGCCAATTTACTATGTTATTTATGTTA ATTTCATTTAATTGTAAGCTGAGTTGGAATGAAATTCGCAGCCAAACCAT AGAATACGATAGCTAAGATGCCAAGTACTTGTGATGCAAAAATAATGCTC TTTGTCATTAACTTAGGATAGCAATCAATCATGCCAAACATCTACAGGAT TTTCGTTATCAAATATAGTCTCTTACTTAAGATTATTTTAAGTGTGATTT TTTTTTAATAGGCAGACGATTCACCAACGAGCACATCAAAATAATTATGT TGTTACACGTCATTAAACTAGCAAAAATTTGTATGCTACAGAATTGTTCT CCAAACAGATTATGAATCCTTAAAGCCTTAAGTTCTTGTTTATTGTAGCT ACAATAATAAAGCAATGACCTAATGTTTAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10420-RA | 1903 | CG10420-RA | 126..1903 | 1..1778 | 8890 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21056721..21058282 | 216..1778 | 99 | <- | Minus |
chr3R | 21058346..21058560 | 1..215 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10420-RA | 1..1290 | 80..1369 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10420-RA | 1..1290 | 80..1369 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10420-RA | 1..1290 | 80..1369 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10420-RA | 1..1290 | 80..1369 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10420-RA | 1..1290 | 80..1369 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10420-RA | 43..1820 | 1..1778 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10420-RA | 43..1820 | 1..1778 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10420-RA | 54..1831 | 1..1778 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10420-RA | 43..1820 | 1..1778 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10420-RA | 54..1831 | 1..1778 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25233636..25235198 | 216..1778 | 100 | <- | Minus |
3R | 25235262..25235476 | 1..215 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25233636..25235198 | 216..1778 | 100 | <- | Minus |
3R | 25235262..25235476 | 1..215 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25233636..25235198 | 216..1778 | 100 | <- | Minus |
3R | 25235262..25235476 | 1..215 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21059358..21060920 | 216..1778 | 100 | <- | Minus |
arm_3R | 21060984..21061198 | 1..215 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24974467..24976029 | 216..1778 | 100 | <- | Minus |
3R | 24976093..24976307 | 1..215 | 100 | Minus |
Translation from 79 to 1368
> GH27496.hyp MSGKQVVILLGSVLILGCLQVAAATETDNKTNDFVATDEWQTIAEGQAIP RGLHVRINLQTGLKEAKLLDESERGTSLQSQPDDQNARESHDDNEPLALD YKPDIIEESIRRVKEQKKSYAELRKAYKEFQKNFRTDGELIVQLIDQFRN FSRTPLESEMRSKLDCLENLEYLLHQIDNALMFIDNGGLDDVLLPIVVND TSTSLRVSAMRVLGSLASNNPKAQIKVFEKNFGSHLAQILTSSGNVGEIS AALHAFGALLRKFPLAQQRVLSTSGTQALIKVLQSPDVELRSKAKVVTLI SDLVLEKRSVLDVSKDDPEASSTMAQYVLLDFESWLKTPGYCAAVDTVLT KEFLLLLEQPEVVEQFATALETTEDMCTSTWSQSSGLRHALLTVRNRYAN STDEYRLEVSQILAKLCERLFNKPKHTEL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10420-PA | 429 | CG10420-PA | 1..429 | 1..429 | 2146 | 100 | Plus |
Translation from 79 to 1368
> GH27496.pep MSGKQVVILLGSVLILGCLQVAAATETDNKTNDFVATDEWQTIAEGQAIP RGLHVRINLQTGLKEAKLLDESERGTSLQSQPDDQNARESHDDNEPLALD YKPDIIEESIRRVKEQKKSYAELRKAYKEFQKNFRTDGELIVQLIDQFRN FSRTPLESEMRSKLDCLENLEYLLHQIDNALMFIDNGGLDDVLLPIVVND TSTSLRVSAMRVLGSLASNNPKAQIKVFEKNFGSHLAQILTSSGNVGEIS AALHAFGALLRKFPLAQQRVLSTSGTQALIKVLQSPDVELRSKAKVVTLI SDLVLEKRSVLDVSKDDPEASSTMAQYVLLDFESWLKTPGYCAAVDTVLT KEFLLLLEQPEVVEQFATALETTEDMCTSTWSQSSGLRHALLTVRNRYAN STDEYRLEVSQILAKLCERLFNKPKHTEL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17435-PA | 424 | GF17435-PA | 1..424 | 1..429 | 1867 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12274-PA | 429 | GG12274-PA | 1..429 | 1..429 | 2107 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14615-PA | 425 | GH14615-PA | 1..425 | 1..429 | 1512 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sil1-PA | 429 | CG10420-PA | 1..429 | 1..429 | 2146 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23669-PA | 421 | GI23669-PA | 10..421 | 10..429 | 1532 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12619-PA | 422 | GL12619-PA | 1..422 | 1..429 | 1619 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10307-PA | 422 | GA10307-PA | 1..422 | 1..429 | 1609 | 72.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17740-PA | 429 | GM17740-PA | 1..429 | 1..429 | 2214 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18223-PA | 429 | GD18223-PA | 1..429 | 1..429 | 2228 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23229-PA | 424 | GJ23229-PA | 6..424 | 6..429 | 1592 | 71.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13840-PA | 418 | GK13840-PA | 4..418 | 14..429 | 1564 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10724-PA | 428 | GE10724-PA | 1..428 | 1..429 | 2095 | 92.1 | Plus |