BDGP Sequence Production Resources |
Search the DGRC for GH27568
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 275 |
Well: | 68 |
Vector: | pOT2 |
Associated Gene/Transcript | l(1)G0469-RA |
Protein status: | GH27568.pep: gold |
Preliminary Size: | 1770 |
Sequenced Size: | 1642 |
Gene | Date | Evidence |
---|---|---|
CG11595 | 2001-01-01 | Release 2 assignment |
CG12482 | 2001-01-01 | Release 2 assignment |
CG32597 | 2002-06-07 | Blastp of sequenced clone |
CG32597 | 2003-01-01 | Sim4 clustering to Release 3 |
l(1)G0469 | 2008-04-29 | Release 5.5 accounting |
l(1)G0469 | 2008-08-15 | Release 5.9 accounting |
l(1)G0469 | 2008-12-18 | 5.12 accounting |
1642 bp (1642 high quality bases) assembled on 2002-06-07
GenBank Submission: AY119552
> GH27568.complete AAGAAGCAGCAGCAGCGAATCGAAGCGTAAAAAAAAAAAACAGAGCAAAT TGAAAGAAGCACAGAACAAAACACAACACAACAAATTTAAATAAAATCCA ACGCAAACAGCGAGAGAAAAGTTATTCCGGAAAACGCGCGGAAAAGTGCA TTTCGAATTTCATTAATTTTTTTTCGAGTGAAAGTTGGGCGCTTCAGGCC CAACAACGCCCACAATGAACCGTTCGAACAGCTTTGTCAGCTCGCTGAAA TGGTGGCCACTGCAGGGTCACAACAACCAACCGGTGGCGCCACCTGCCAG CGGTTACTCCCAATCGGCGCCCAGCTCGCCCACCTCCAATTGGCCACCGC CACTGCAGCAGCATCAGAATCCCACAACCGGCACCGCCCACCGCCTACTG CCGCCCAGCGGGCAAAAGAATGGAATTGCTGGCGGCACCGTGGGCGCCAC ATTCGGCAGCAGTGTGGCAGTGCAAAAGCTGCGCGAATCCAAGTGGTTCA AGCCCGAGGAGCAGCGCATCTTTTGCGCCGTCGTCGAGTGCGGTTTCGTG GTCGAGATCCGCAGCAGCGCCGCAGCCGAGGCGGCCGCAGCTAACGCAGC AGCAGCGGCCGCAGCAGCCGACACCGGTGACAACGACCTCGACGTGGACG CTCTGGAGGAGCTCGACTGCCCACTGACCAACCACCCATCGCCGCCGCAT CGCAATCACAGCCATAGTCACAGCCAAATCCAAAACCAATCCCAGCGGCT GGTCATCCCGCGCAACGGTAGCAGTTTCCTGGAGACGCAGGACGAGAATG AGACGCCTGTCGCCTCTTGGTATGGAATCGTGCTCTGCAAGGTGGCCAAA GACAATAAACCCAAGCCGGAGACCATTGAGATATATTCGGTGAAAATCCG TGAGAATGGTACATACAAGTTGATCAAGATGCAATTGGCGGATATTTGGA GTCACGGATGGGAGCTGCGTATCAATAACTTTGCCGACAAGGAAAAGGTG CCGCACAACGAGAAGGATATTCGCAATCAGGTGTCGGTGGCGCGCAAAGC CAAACAGAGTCTGTGGAACAATAATAAGCATTTTGTGTACTGGTGCCGCT ACGGAAGTCGTCAGCAGGATCTGCGAAAGCGACAGGTAACGACGAGTGCC AATCACGTGCTGCTGCACCTGATCAATTGATAAGTCGAGCCGAGTCAGCC GGAGTCCAATAAATGGACGTGGAGAAAATGAAATGAGAAATAGGAGCGTT TGAAGCGCCGACACTGAAACCCATCCTTTTTCCTGCTCCTGCTCCTGCTA CTGCACCATACCACCACCTTAATCCGCCACCCAAAAACTGTGCATTGATT GCAGCAAAAAGACCGAAAAAAAACCCAAAGCAATGTAAAAACATGAAAAA CCACACATCATACCGACCAAGTCATCATACATACTCAAAACTCTAGTACG CAACGTGGACTAAAAACGTCAAAAACGAACTGAGGGAACCGGAAAAAAAG AACCATTAACTTTTTCTAGGGCCCCGACCTATGCATCTATCTATGCACCC ATCATTCAACTACCGATTCACGCTTGCTTTGCTCATACAAAAAAAAAAAA AAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0469.c | 2383 | l(1)G0469.c | 269..1862 | 1..1594 | 7970 | 100 | Plus |
l(1)G0469.d | 2418 | l(1)G0469.d | 611..2204 | 1..1594 | 7970 | 100 | Plus |
l(1)G0469.a | 3070 | l(1)G0469.a | 269..1862 | 1..1594 | 7970 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 14100985..14101838 | 851..1 | 4125 | 99.4 | Minus |
chrX | 22417052 | chrX | 14096458..14097030 | 1594..1029 | 2525 | 96.5 | Minus |
chrX | 22417052 | chrX | 14097156..14097339 | 1033..850 | 905 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 14210434..14211284 | 851..1 | 4255 | 100 | Minus |
X | 23542271 | X | 14205903..14206468 | 1594..1029 | 2830 | 100 | Minus |
X | 23542271 | X | 14206594..14206777 | 1033..850 | 920 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 14218532..14219382 | 851..1 | 4255 | 100 | Minus |
X | 23527363 | X | 14214001..14214566 | 1594..1029 | 2830 | 100 | Minus |
X | 23527363 | X | 14214692..14214875 | 1033..850 | 920 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 2346..2448 | 76..176 | 113 | 59.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 14100985..14101217 | 619..851 | 100 | == | Minus |
chrX | 14096464..14096684 | 1368..1588 | 100 | <- | Minus |
chrX | 14096696..14097028 | 1031..1367 | 97 | <- | Minus |
chrX | 14097159..14097337 | 852..1030 | 99 | <- | Minus |
chrX | 14101276..14101734 | 102..560 | 99 | -> | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0469-RA | 1..966 | 215..1180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0469-RA | 1..966 | 215..1180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0469-RA | 1..966 | 215..1180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0469-RA | 1..966 | 215..1180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0469-RA | 1..966 | 215..1180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0469-RA | 172..1759 | 1..1588 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0469-RA | 172..1759 | 1..1588 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0469-RD | 174..1761 | 1..1588 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0469-RA | 172..1759 | 1..1588 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0469-RD | 174..1761 | 1..1588 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14205909..14206466 | 1031..1588 | 100 | <- | Minus |
X | 14206597..14206775 | 852..1030 | 100 | <- | Minus |
X | 14210434..14211284 | 1..851 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14205909..14206466 | 1031..1588 | 100 | <- | Minus |
X | 14206597..14206775 | 852..1030 | 100 | <- | Minus |
X | 14210434..14211284 | 1..851 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14205909..14206466 | 1031..1588 | 100 | <- | Minus |
X | 14206597..14206775 | 852..1030 | 100 | <- | Minus |
X | 14210434..14211284 | 1..851 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 14099942..14100499 | 1031..1588 | 100 | <- | Minus |
arm_X | 14100630..14100808 | 852..1030 | 100 | <- | Minus |
arm_X | 14104467..14105317 | 1..851 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14214007..14214564 | 1031..1588 | 100 | <- | Minus |
X | 14214695..14214873 | 852..1030 | 100 | <- | Minus |
X | 14218532..14219382 | 1..851 | 100 | Minus |
Translation from 214 to 1179
> GH27568.hyp MNRSNSFVSSLKWWPLQGHNNQPVAPPASGYSQSAPSSPTSNWPPPLQQH QNPTTGTAHRLLPPSGQKNGIAGGTVGATFGSSVAVQKLRESKWFKPEEQ RIFCAVVECGFVVEIRSSAAAEAAAANAAAAAAAADTGDNDLDVDALEEL DCPLTNHPSPPHRNHSHSHSQIQNQSQRLVIPRNGSSFLETQDENETPVA SWYGIVLCKVAKDNKPKPETIEIYSVKIRENGTYKLIKMQLADIWSHGWE LRINNFADKEKVPHNEKDIRNQVSVARKAKQSLWNNNKHFVYWCRYGSRQ QDLRKRQVTTSANHVLLHLIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0469-PD | 321 | CG32597-PD | 1..321 | 1..321 | 1718 | 100 | Plus |
l(1)G0469-PA | 321 | CG32597-PA | 1..321 | 1..321 | 1718 | 100 | Plus |
l(1)G0469-PC | 338 | CG32597-PC | 1..309 | 1..309 | 1650 | 99.4 | Plus |
Translation from 214 to 1179
> GH27568.pep MNRSNSFVSSLKWWPLQGHNNQPVAPPASGYSQSAPSSPTSNWPPPLQQH QNPTTGTAHRLLPPSGQKNGIAGGTVGATFGSSVAVQKLRESKWFKPEEQ RIFCAVVECGFVVEIRSSAAAEAAAANAAAAAAAADTGDNDLDVDALEEL DCPLTNHPSPPHRNHSHSHSQIQNQSQRLVIPRNGSSFLETQDENETPVA SWYGIVLCKVAKDNKPKPETIEIYSVKIRENGTYKLIKMQLADIWSHGWE LRINNFADKEKVPHNEKDIRNQVSVARKAKQSLWNNNKHFVYWCRYGSRQ QDLRKRQVTTSANHVLLHLIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15991-PA | 327 | GF15991-PA | 1..298 | 1..309 | 1038 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19469-PA | 340 | GG19469-PA | 1..311 | 1..309 | 1329 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12456-PA | 298 | GH12456-PA | 1..298 | 1..321 | 1067 | 71.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0469-PD | 321 | CG32597-PD | 1..321 | 1..321 | 1718 | 100 | Plus |
l(1)G0469-PA | 321 | CG32597-PA | 1..321 | 1..321 | 1718 | 100 | Plus |
l(1)G0469-PC | 338 | CG32597-PC | 1..309 | 1..309 | 1650 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15053-PA | 313 | GI15053-PA | 1..284 | 1..309 | 1031 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13005-PA | 293 | GL13005-PA | 1..293 | 1..321 | 723 | 56.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25812-PA | 293 | GA25812-PA | 1..293 | 1..321 | 1083 | 71.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17566-PA | 153 | GM17566-PA | 101..153 | 269..321 | 266 | 92.5 | Plus |
Dsec\GM17566-PA | 153 | GM17566-PA | 1..62 | 1..59 | 265 | 83.9 | Plus |
Dsec\GM17566-PA | 153 | GM17566-PA | 42..104 | 153..213 | 223 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24512-PA | 304 | GD24512-PA | 1..279 | 1..278 | 1399 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14707-PA | 311 | GJ14707-PA | 1..282 | 1..309 | 1036 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25177-PA | 315 | GK25177-PA | 1..315 | 1..321 | 1074 | 73.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16123-PA | 346 | GE16123-PA | 1..317 | 1..309 | 1574 | 94 | Plus |