Clone GH27691 Report

Search the DGRC for GH27691

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:276
Well:91
Vector:pOT2
Associated Gene/TranscriptCG31781-RB
Protein status:GH27691.pep: wuzgold
Preliminary Size:2405
Sequenced Size:2341

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15131 2001-01-01 Release 2 assignment
CG31781 2003-01-01 Sim4 clustering to Release 3
CG31781 2003-01-15 Blastp of sequenced clone
CG31781 2008-04-29 Release 5.5 accounting
CG31781 2008-08-15 Release 5.9 accounting
CG31781 2008-12-18 5.12 accounting

Clone Sequence Records

GH27691.complete Sequence

2341 bp (2341 high quality bases) assembled on 2003-01-15

GenBank Submission: AY075352

> GH27691.complete
TGGTAGCGTCTGGTGTGGCGAGCCAACAAAAGGCTGGCAGAGCGGCCAAC
ACCGGACCCGGCCCGAAACTGAATCCGGGTCCGGGTCTGGGTCCGTGTCC
GTGTCCGGGTTGGTTTCGCAGCATCTACGGCATCACGGCTGCCAATTGAG
CGGAGTTTGGGTCTCAATTTGACGCGTAGCCAGCCAAGAAGAGTGGCCGG
CCAACAACAAAAACAGGTGACGCAGGATGTGGCCAACTGAGTAGGGAGAT
GGCGGAAGAGCAGGAGGCGCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AAACGCAGCACACTTTTTTGGCCACGGTCCGCGTTTGATTAGCCAACTCA
AACATCAGGGCCAAGATCAGGGCAATTGACAGCTCTGCTCCCTCAGTTTC
TGCTTCCGCTTGGCACACAGTCACAGAGACACACATTGCCTTATGGCCAC
TGGACGATGGACCACAGTGGAGCCTGGGCAGTACGCAACACCTGACGCTG
CCCGCCAGGATACTCCCGTTCGTCTCGATCATACAGCAAATAAGAAACAT
TAAATAAACAATCAAAGAAACGGAGTATTGCTCCGCAACTGCCAACAACA
TTCAACGACAACCAGTTGCTCTGTGGTGCTAGAAAGTGAGTGTAAACAGT
GTGTGCCTTTGTGAACTGAACTGACCAACGTGCCAAGAACGAAGGGACGA
GGAGGTGGGCACTCTGGCTCGGACCCAAGCGATTTGGCAGGAGCTGATTG
TTTCATCTGGCCAGGCTTAATGAAATAACTCGTCCTGGCCGCGGCTCCAT
GTCAAACGCAGCAGGGCAATCGCCAGCGAAGCCCCAAAGGATAAGCATCG
TCCAGAACATCGGAATCTCCAGCGAAGGATGCACCAAAAACATTATCCAC
AGGACTAAGATGCCAAAGGAAACTTTCAAGATCCGTTTCCAAAACAAAAC
ATAAAATATATTCAATAAAAATGAAGTGGAAATGAAATGATACATAATAA
ATACCCTAATACATAACAGAAACAAAAGCAAGTCACTAAACTTGACTGCA
AATATAATACGATGACACTTAATAGAAACATTGTAATAAAATTGAAAAGA
AGTAGACAAGAATAACCACTCATAAAACTAAAATACCCAGCCTATAACTA
TTTTTCAAATAGTTGGCATAGTGCTTACTATGAACCATAATCGCATATGA
TATAACCAATATTGAGCACTTAATATAGCCCAATATTATATAGACCCAAA
TATGAAATAGTCACAAACAATAGTGCAATACAATACGTTTATAAAACAAC
GTCAAAAGTTTTATAACGAAAATATATTTCTTTATAATGAGCACTTTCGA
ACAACTACATTTAATATAAAATAGCGCGGGAAGTCTTCGGCGTGGTGAAA
GTATAAGGTGTAAGCACAGCTGAGAAGAAAGGAATTTACAAAATCGAAGG
AAGAAGTGAAAGAAGGAGTGAAAAAACATCTAAGCGCGGAAAAGTGCTAC
AAAATGAAGCTGACATCCTAAAGGAAACCTTGTTGGCCAATTGGGGAGGA
GGCCCAGAAGGTCGGGCCGATTTTCCGCTGCAACCGACGAAGGTCTGACC
AACCAATCGCAACGCACAGCGGCGACGAAGCCCGGCCGAATGGGAGCATC
TCGGGCAAACGGAGGGACAGTCAGCCGCCCTGCAATGCATTTCTTTTGGC
AACGAGTCAAGCGGCCTTTCACACACACACACACACACATTAGGATTCCA
TAAGGATACTCTGCCTCGCTCACATGCGCATCGAGTGGTATACGTAATAT
ATCAAGTATACGCCTGTTGGCCGGGCAGAAAGTCTGTGAGTGTGTGCGAA
TGGCCAAACAGAGTGTTGCCAACTGCATTGCCGGGCTGCCAACGACTCAA
CCCCCGACCCGAGGACACCACCCTCCTCCCGGCCAGGAGGCCAACGACGA
GTCCTTTTTGGAGGCAGCGCATTGGCTGCAGGACGACCGGCGACAGGACG
ACCAATCACCAATCAAATCGCGGCTTGTGCGCACTATCACGGCCGTACGA
AGGGCCAAAGGCACGGCATCCAGGACCTCAGCCGGAGACCCCAAGCCGAT
TGTCAATCTCTTAGACATATTATTATGCCAACGTCTCCTATATTATAGTT
CTCTAGTCGTAAGTCACATGCCCAAGCCATCGCCCCAGAACATCGGGGAC
ATGAAACATTAGTTTTATTGATAGAGTTCTTAGTTTCGAGCAGAAGCTAT
ACGATGATGATTTCAAGAATGAGAAAACGGAATAAAAACTGTAAAGCTTC
AGAGCGGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

GH27691.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:25:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG31781-RB 2439 CG31781-RB 123..2437 1..2315 11575 100 Plus
CG31781-RC 2533 CG31781-RC 1..1506 1..1506 7530 100 Plus
CG31781.c 1573 CG31781.c 641..1573 1375..2310 4610 99.6 Plus
CG31781-RC 2533 CG31781-RC 1729..2533 1506..2310 4025 100 Plus
CG31781.c 1573 CG31781.c 6..640 1..635 3175 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:15:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 16868173..16869669 1..1506 7345 99.3 Plus
chr2L 23010047 chr2L 16876157..16876961 1506..2310 3980 99.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:11:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:14:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16869492..16870997 1..1506 7530 100 Plus
2L 23513712 2L 16877496..16878305 1506..2315 4050 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:02:55
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16869492..16870997 1..1506 7530 100 Plus
2L 23513712 2L 16877496..16878305 1506..2315 4050 100 Plus
Blast to na_te.dros performed 2019-03-16 16:14:59
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy11 4428 gypsy11 GYPSY11 4428bp 1832..1945 987..1101 122 57.4 Plus

GH27691.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:15:57 Download gff for GH27691.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 16868173..16869669 1..1506 96 -> Plus
chr2L 16876158..16876961 1507..2310 97   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:59:00 Download gff for GH27691.complete
Subject Subject Range Query Range Percent Splice Strand
CG31781-RB 1..363 1850..2212 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:56:01 Download gff for GH27691.complete
Subject Subject Range Query Range Percent Splice Strand
CG31781-RC 1..363 1850..2212 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:46:58 Download gff for GH27691.complete
Subject Subject Range Query Range Percent Splice Strand
CG31781-RB 1..363 1850..2212 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:11:35 Download gff for GH27691.complete
Subject Subject Range Query Range Percent Splice Strand
CG31781-RB 6..2315 1..2310 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:56:01 Download gff for GH27691.complete
Subject Subject Range Query Range Percent Splice Strand
CG31781-RB 6..2315 1..2310 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:46:58 Download gff for GH27691.complete
Subject Subject Range Query Range Percent Splice Strand
CG31781-RB 6..2315 1..2310 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:15:57 Download gff for GH27691.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16869492..16870997 1..1506 100 -> Plus
2L 16877497..16878300 1507..2310 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:15:57 Download gff for GH27691.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16869492..16870997 1..1506 100 -> Plus
2L 16877497..16878300 1507..2310 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:15:57 Download gff for GH27691.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16869492..16870997 1..1506 100 -> Plus
2L 16877497..16878300 1507..2310 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:06:09 Download gff for GH27691.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16869492..16870997 1..1506 100 -> Plus
arm_2L 16877497..16878300 1507..2310 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:06:09 Download gff for GH27691.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16869492..16870997 1..1506 100 -> Plus
arm_2L 16877497..16878300 1507..2310 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:06:09 Download gff for GH27691.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16869492..16870997 1..1506 100 -> Plus
arm_2L 16877497..16878300 1507..2310 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:18:10 Download gff for GH27691.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16869492..16870997 1..1506 100 -> Plus
2L 16877497..16878300 1507..2310 100   Plus

GH27691.pep Sequence

Translation from 1849 to 2211

> GH27691.pep
MAKQSVANCIAGLPTTQPPTRGHHPPPGQEANDESFLEAAHWLQDDRRQD
DQSPIKSRLVRTITAVRRAKGTASRTSAGDPKPIVNLLDILLCQRLLYYS
SLVVSHMPKPSPQNIGDMKH*

GH27691.pep Blast Records

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24090-PA 116 GD24090-PA 1..116 5..120 583 94.8 Plus

GH27691.hyp Sequence

Translation from 1849 to 2211

> GH27691.hyp
MAKQSVANCIAGLPTTQPPTRGHHPPPGQEANDESFLEAAHWLQDDRRQD
DQSPIKSRLVRTITAVRRAKGTASRTSAGDPKPIVNLLDILLCQRLLYYS
SLVVSHMPKPSPQNIGDMKH*
Sequence GH27691.hyp has no blast hits.