Clone GH27708 Report

Search the DGRC for GH27708

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:277
Well:8
Vector:pOT2
Associated Gene/TranscriptPdp1-RD
Protein status:GH27708.pep: gold
Preliminary Size:2972
Sequenced Size:3095

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17888 2001-01-01 Release 2 assignment
CG17888 2001-12-12 Blastp of sequenced clone
Pdp1 2008-04-29 Release 5.5 accounting
Pdp1 2008-08-15 Release 5.9 accounting
Pdp1 2008-12-18 5.12 accounting

Clone Sequence Records

GH27708.complete Sequence

3095 bp (3095 high quality bases) assembled on 2001-12-12

GenBank Submission: AY070526

> GH27708.complete
CGTTCTCATGTGAAAATCGTCGCAGCTCGTTCCGTGTTTTCGCCACTCGA
GCGGGAAAATCAAAAAATATTTCTACGCTCAACAAAATAAATTAATTGAA
ATTGATTTTTCAAGCAACAGAAATAGTTCTAGAAGAACTATAAATCGAGG
AAGTCATTTTTGTTTTATCAAATTTCAAGTGCAATGGGTTCATTGTGAAA
TCAATCTAAAGTGTGTGTGTGTGTGTCATTCGAATAATTACTATTATTAA
AAAAGAAATAAATACGCAGAAAGAGAGAGAGAGATCGAACGAGGCAGAGT
GAAAGAGAGAGATAGAGAAAAAAGCGAGAGATCCGGAGATCTCTCGAGAA
TCTTTAAACAACAGCGCTAAAGTTACGGATCTAATTTCAAACAGTTTAAT
TTACTTTTAATTTTTCTACAAAACAACAAACTTCAAAAAGAAAAATACGA
ACCAGCAAAACTCAAAGCAAAAAACGATCTCATATCCAAGCGCAGCAACA
AATTCTGAGAATAAGAAAAGCACAATATTTTTTTCAGATAACACAGACAA
GCGTTTATGTTAAAAACAAAAAAACTAAAGTGAACCCAAGTGTAAAGACA
ATGCGCACAACTTTTGGCCGTGGCCCAAAGTTTATACTGCTGACCAGCAA
ATTTAATCACGTTCAGCACAAGGAGGTGATCACCTAGGATCATCAGAAAA
CAGTGATTAACCGTAACCAGTGAAGGATAACCCAGTGAATAACGTACCCA
GTTGTTGAAACCAGTGATCATGTCGTCGGATACGAATTCGTGTACTAGTT
TCTTTGCCCAGGAGCACGCGAATGCCACATTGTCGCAGTATTTCCAGCAG
CTTAACTCGCACGTTGCTGCTGCAGCGGCGGGCAATAGCGGTGGCAACAG
CAGCAGCAGCAACAACAACAACAGCAGCGGCAACAACAGCAGCAGCGGCA
ACAGCGACAGCGGAAATGATGGCAGCATGACAGGATCATCGGGAACCATG
GACAACCATCGCAGCAGTGTTAGCAGCAATGATTCGGGCAAGAGTAGCGC
CACAGGAGGCGGCGGGGCAGGTGCCACCAGCAACAATGGCGTGAATGCCT
GGGCCTTGCAGCAGCAGCAACAAACCGCCGCCCTGCACCATCAGCAACAG
CAGCAGCATCAACAGCAGCAGCAACACCAACAGCACCTACAGCAACACCA
TCAAGCGCACCATCAGCATGTCCTGCAGCAGCAGCAGCAGCAGCAACAGC
AGCACTCCCAGCATCAGCATCAGCAGCAACATCACGGCCACCCGTTGCAT
CCGCATCATACACACCAGCAGCAACAACAACAACAACAGCAGCAGCAGCC
GCCGCCGCAACACCACCAGCAGCAGCAACAGCAGCACGCACAGCAGCAGC
AGCAGCAGCATCATGCCGCCCAGCTGGCACATACACTGTCATCGGCCGCC
GTTGCTGCTGCAGCCGGGAATACCGGTGGCAACACCAACCCCCACTCCAT
TTTCGGCACCGGCAACTTCCACTACAAGACGAACAACTCGTGGACGCTGC
CCACGCTAACGTACCAGAGGATTTACCAGGAGAATCCCCATTACCAGCGC
AACTCCTTCATGGATCCGCAGAGTAATGCCGCTGCAGCTGCAGCAGCTGC
TGCTGCCAGTTGCAATGCTGCCGCTGTTGCGGCAGCCGCTGCAGTTGCAA
GTGGCAACCAGGGATCGAATGGGAATGCCAGTGGCAATGGTAATGCTGTT
GTGGCGGCAACTGGTAATGGAAATGGTGGAAATCCCGGCCAGAATAACAA
CAACAATAACGGCAACAATAGTGGCAATAGCAACAATAACAGCAACAACA
ATGTGTCCTCCGTGCAACATGTGGCAAATGCCGTCGCAGCGGCAGTGATC
GCCAATGAGCATCACAACCATTTGAACAGCTTGAAAGCGCGATTTCAGCC
AGCCAGCTCAGGCAGGAAATCTCCGTTTTTGGGTTTCATTTGCAAATCAA
ACGGCAAATCCACATCGAATAGCAAAGAGATCATCTGCCCAGATGACAAA
TACAAGGAGGAGGGCGACATCTGGAATGTTGAGGCGCAAACAGCGTTTCT
CGGCCCAAATCTGTGGGACAAGACCCTGCCCTATGATGCCGACCTCAAGG
TAACACAATATGCCGACCTAGACGAATTCCTGTCGGAGAACAACATACCT
GATGGCCTGCCCGGCACGCATCTGGGCCACTCCAGTGGCCTGGGCCACCG
GTCCGATTCCCTGGGTCACGCAGCGGGTCTGTCTCTTGGTCTTGGCCACA
TAACCACAAAGCGAGAGCGGTCGCCCTCGCCATCCGACTGCATCAGTCCG
GACACGCTAAATCCGCCATCGCCGGCCGAGTCAACATTTTCGTTCGCCTC
CTCGGGCCGTGACTTTGATCCGCGAACCAGAGCCTTCTCCGACGAGGAGC
TCAAGCCGCAGCCGATGATCAAAAAGTCACGCAAGCAATTCGTTCCAGAT
GAGCTCAAGGACGACAAGTACTGGGCACGTCGCCGGAAGAACAACATTGC
CGCCAAGCGATCCCGCGATGCCCGGCGCCAGAAGGAGAACCAGATTGCGA
TGCGGGCACGCTACTTGGAGAAGGAAAATGCAACATTACATCAGGAGGTG
GAGCAGTTGAAACAGGAGAACATGGACTTGCGTGCACGTCTATCGAAATT
CCAAGATGTGTAATGATAAATACAATTTTGTGACTTGGCCTGAGGACACC
ACAACAATTAAATAATAATAACTATTGATAAAATAACAATAATCATAACT
ATGATAAAACTACTAATAATGTTTAGTACAGCAGACATGAAACCTACACT
ATAAAGTACATATTGTATCTAAATATGTATATGCAAAAGTATAATTAGTA
AGCAAACACACACCCACACAAACACAAGAAACCCCTCACGGCGTCGTGCT
CCGCTTTAATATTTATTTTATGCTAAAAACTAAAAGCAAATTAACTAAAC
ACCGAGGAGGAGAAACCGACCGAATGGAAACTAAAAACATTTTTTAGAGT
AGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

GH27708.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:50:03
Subject Length Description Subject Range Query Range Score Percent Strand
Pdp1.h 5007 Pdp1.h 1..3067 1..3067 15320 99.9 Plus
Pdp1-RD 4702 Pdp1-RD 1..3067 1..3067 15320 99.9 Plus
Pdp1.a 4685 Pdp1.a 519..3050 536..3067 12645 99.9 Plus
Pdp1.a 4685 Pdp1.a 1..520 1..520 2600 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:49:50
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 7822498..7823950 1962..516 6755 98.2 Minus
chr3L 24539361 chr3L 7824672..7825199 520..1 2440 97.9 Minus
chr3L 24539361 chr3L 7808069..7808496 3054..2627 2125 99.8 Minus
chr3L 24539361 chr3L 7808568..7808809 2626..2385 1210 100 Minus
chr3L 24539361 chr3L 7809515..7809740 2384..2159 1100 99.1 Minus
chr3L 24539361 chr3L 7810145..7810300 2158..2003 780 100 Minus
chr3L 24539361 chr3L 7812066..7812111 2004..1959 230 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:11:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:49:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7830386..7831832 1962..516 7235 100 Minus
3L 28110227 3L 7832554..7833073 520..1 2600 100 Minus
3L 28110227 3L 7815972..7816412 3067..2627 2190 99.8 Minus
3L 28110227 3L 7816484..7816725 2626..2385 1210 100 Minus
3L 28110227 3L 7817437..7817662 2384..2159 1130 100 Minus
3L 28110227 3L 7818069..7818224 2158..2003 780 100 Minus
3L 28110227 3L 7819987..7820032 2004..1959 230 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:16:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 7823486..7824932 1962..516 7235 100 Minus
3L 28103327 3L 7825654..7826173 520..1 2600 100 Minus
3L 28103327 3L 7809072..7809512 3067..2627 2190 99.7 Minus
3L 28103327 3L 7809584..7809825 2626..2385 1210 100 Minus
3L 28103327 3L 7810537..7810762 2384..2159 1130 100 Minus
3L 28103327 3L 7811169..7811324 2158..2003 780 100 Minus
3L 28103327 3L 7813087..7813132 2004..1959 230 100 Minus
3R 31820162 3R 31111223..31111279 1148..1204 195 89.4 Plus
Blast to na_te.dros performed 2019-03-16 03:49:49
Subject Length Description Subject Range Query Range Score Percent Strand
Stalker2 7672 Stalker2 STALKER2 7672bp 3552..3671 66..184 130 60.2 Plus
Juan 4236 Juan JUAN 4236bp 4066..4111 2957..3001 128 78.3 Plus
S-element 1736 S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). 1523..1618 3050..2958 123 62.2 Minus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 1102..1156 2864..2924 119 73.8 Plus

GH27708.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:50:35 Download gff for GH27708.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 7822499..7822609 1851..1961 99 == Minus
chr3L 7822675..7822767 1693..1785 100 == Minus
chr3L 7822834..7823045 1415..1626 99 == Minus
chr3L 7823147..7823178 1282..1313 100 == Minus
chr3L 7824672..7824860 332..520 99 == Minus
chr3L 7823230..7823477 977..1224 81 == Minus
chr3L 7808568..7808809 2385..2626 100 <- Minus
chr3L 7809515..7809740 2159..2384 99 <- Minus
chr3L 7810145..7810299 2004..2158 100 <- Minus
chr3L 7812067..7812108 1962..2003 100 <- Minus
chr3L 7808069..7808302 2821..3054 99 == Minus
chr3L 7808363..7808496 2627..2760 100 <- Minus
chr3L 7823585..7823945 521..872 96 <- Minus
chr3L 7824933..7825199 1..267 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:31:42 Download gff for GH27708.complete
Subject Subject Range Query Range Percent Splice Strand
Pdp1-RD 1..1944 770..2713 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:19:05 Download gff for GH27708.complete
Subject Subject Range Query Range Percent Splice Strand
Pdp1-RD 1..1944 770..2713 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:05:19 Download gff for GH27708.complete
Subject Subject Range Query Range Percent Splice Strand
Pdp1-RD 1..1944 770..2713 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:45:12 Download gff for GH27708.complete
Subject Subject Range Query Range Percent Splice Strand
Pdp1-RD 1..1944 770..2713 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:16:21 Download gff for GH27708.complete
Subject Subject Range Query Range Percent Splice Strand
Pdp1-RD 1..1944 770..2713 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:31:41 Download gff for GH27708.complete
Subject Subject Range Query Range Percent Splice Strand
Pdp1-RD 1..3054 1..3054 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:19:05 Download gff for GH27708.complete
Subject Subject Range Query Range Percent Splice Strand
Pdp1-RD 1..3054 1..3054 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:05:19 Download gff for GH27708.complete
Subject Subject Range Query Range Percent Splice Strand
Pdp1-RD 1..3054 1..3054 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:45:12 Download gff for GH27708.complete
Subject Subject Range Query Range Percent Splice Strand
Pdp1-RD 1..3054 1..3054 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:16:21 Download gff for GH27708.complete
Subject Subject Range Query Range Percent Splice Strand
Pdp1-RD 1..3054 1..3054 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:50:35 Download gff for GH27708.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7815985..7816412 2627..3054 100 <- Minus
3L 7816484..7816725 2385..2626 100 <- Minus
3L 7817437..7817662 2159..2384 100 <- Minus
3L 7818069..7818223 2004..2158 100 <- Minus
3L 7819988..7820029 1962..2003 100 <- Minus
3L 7830387..7831827 521..1961 100 <- Minus
3L 7832554..7833073 1..520 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:50:35 Download gff for GH27708.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7815985..7816412 2627..3054 100 <- Minus
3L 7816484..7816725 2385..2626 100 <- Minus
3L 7817437..7817662 2159..2384 100 <- Minus
3L 7818069..7818223 2004..2158 100 <- Minus
3L 7819988..7820029 1962..2003 100 <- Minus
3L 7830387..7831827 521..1961 100 <- Minus
3L 7832554..7833073 1..520 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:50:35 Download gff for GH27708.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7815985..7816412 2627..3054 100 <- Minus
3L 7816484..7816725 2385..2626 100 <- Minus
3L 7817437..7817662 2159..2384 100 <- Minus
3L 7818069..7818223 2004..2158 100 <- Minus
3L 7819988..7820029 1962..2003 100 <- Minus
3L 7830387..7831827 521..1961 100 <- Minus
3L 7832554..7833073 1..520 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:05:19 Download gff for GH27708.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7809085..7809512 2627..3054 100 <- Minus
arm_3L 7809584..7809825 2385..2626 100 <- Minus
arm_3L 7810537..7810762 2159..2384 100 <- Minus
arm_3L 7811169..7811323 2004..2158 100 <- Minus
arm_3L 7813088..7813129 1962..2003 100 <- Minus
arm_3L 7823487..7824927 521..1961 100 <- Minus
arm_3L 7825654..7826173 1..520 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:21:34 Download gff for GH27708.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7809584..7809825 2385..2626 100 <- Minus
3L 7810537..7810762 2159..2384 100 <- Minus
3L 7811169..7811323 2004..2158 100 <- Minus
3L 7813088..7813129 1962..2003 100 <- Minus
3L 7809085..7809512 2627..3054 100 <- Minus
3L 7823487..7824927 521..1961 100 <- Minus
3L 7825654..7826173 1..520 100   Minus

GH27708.pep Sequence

Translation from 769 to 2712

> GH27708.pep
MSSDTNSCTSFFAQEHANATLSQYFQQLNSHVAAAAAGNSGGNSSSSNNN
NSSGNNSSSGNSDSGNDGSMTGSSGTMDNHRSSVSSNDSGKSSATGGGGA
GATSNNGVNAWALQQQQQTAALHHQQQQQHQQQQQHQQHLQQHHQAHHQH
VLQQQQQQQQQHSQHQHQQQHHGHPLHPHHTHQQQQQQQQQQQPPPQHHQ
QQQQQHAQQQQQQHHAAQLAHTLSSAAVAAAAGNTGGNTNPHSIFGTGNF
HYKTNNSWTLPTLTYQRIYQENPHYQRNSFMDPQSNAAAAAAAAAASCNA
AAVAAAAAVASGNQGSNGNASGNGNAVVAATGNGNGGNPGQNNNNNNGNN
SGNSNNNSNNNVSSVQHVANAVAAAVIANEHHNHLNSLKARFQPASSGRK
SPFLGFICKSNGKSTSNSKEIICPDDKYKEEGDIWNVEAQTAFLGPNLWD
KTLPYDADLKVTQYADLDEFLSENNIPDGLPGTHLGHSSGLGHRSDSLGH
AAGLSLGLGHITTKRERSPSPSDCISPDTLNPPSPAESTFSFASSGRDFD
PRTRAFSDEELKPQPMIKKSRKQFVPDELKDDKYWARRRKNNIAAKRSRD
ARRQKENQIAMRARYLEKENATLHQEVEQLKQENMDLRARLSKFQDV*

GH27708.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:15:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24150-PA 639 GF24150-PA 250..639 241..647 1663 87 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:15:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14935-PA 598 GG14935-PA 339..598 377..647 1401 93.7 Plus
Dere\GG14934-PA 418 GG14934-PA 234..412 219..398 376 90.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:15:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23565-PA 573 GH23565-PA 466..573 540..647 595 100 Plus
Dgri\GH23565-PA 573 GH23565-PA 288..477 238..424 368 58.9 Plus
Dgri\GH16513-PA 842 GH16513-PA 1..99 1..84 177 53.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:22:49
Subject Length Description Subject Range Query Range Score Percent Strand
Pdp1-PD 647 CG17888-PD 1..647 1..647 3432 100 Plus
Pdp1-PJ 633 CG17888-PJ 1..633 1..647 3330 97.8 Plus
Pdp1-PL 581 CG17888-PL 3..581 113..647 1500 56.6 Plus
Pdp1-PC 570 CG17888-PC 15..570 157..647 1419 57.4 Plus
Pdp1-PG 284 CG17888-PG 34..284 397..647 1321 99.6 Plus
Pdp1-PO 264 CG17888-PO 15..264 398..647 1320 100 Plus
Pdp1-PN 281 CG17888-PN 34..281 397..647 1293 98.4 Plus
Pdp1-PK 270 CG17888-PK 34..270 411..647 1249 100 Plus
Pdp1-PP 270 CG17888-PP 34..270 411..647 1249 100 Plus
Pdp1-PB 270 CG17888-PB 34..270 411..647 1249 100 Plus
Pdp1-PF 250 CG17888-PF 15..250 412..647 1243 100 Plus
Pdp1-PM 275 CG17888-PM 34..275 411..647 1228 97.5 Plus
Pdp1-PI 232 CG17888-PI 34..232 411..647 998 83.5 Plus
Smr-PF 3601 CG4013-PF 23..408 39..340 335 30.6 Plus
Smr-PE 3601 CG4013-PE 23..408 39..340 335 30.6 Plus
Smr-PD 3601 CG4013-PD 23..408 39..340 335 30.6 Plus
Smr-PG 3607 CG4013-PG 23..414 39..340 329 30.4 Plus
Tet-PA 2860 CG43444-PA 3..231 92..363 306 35.3 Plus
Tet-PE 2866 CG43444-PE 3..231 92..363 306 35.3 Plus
Tet-PB 2915 CG43444-PB 3..231 92..363 306 35.3 Plus
Tet-PF 2921 CG43444-PF 3..231 92..363 306 35.3 Plus
sr-PE 906 CG7847-PE 256..559 37..306 296 31.9 Plus
sr-PB 906 CG7847-PB 256..559 37..306 296 31.9 Plus
sr-PA 1186 CG7847-PA 536..839 37..306 296 31.9 Plus
sr-PD 1271 CG7847-PD 536..839 37..306 296 31.9 Plus
Smr-PF 3601 CG4013-PF 13..301 42..312 284 33.9 Plus
Smr-PE 3601 CG4013-PE 13..301 42..312 284 33.9 Plus
Smr-PD 3601 CG4013-PD 13..301 42..312 284 33.9 Plus
Sp1-PB 520 CG1343-PB 297..506 29..236 276 36.2 Plus
Sp1-PD 715 CG1343-PD 492..701 29..236 276 36.2 Plus
Sp1-PE 720 CG1343-PE 497..706 29..236 276 36.2 Plus
Sp1-PF 726 CG1343-PF 492..701 29..236 276 36.2 Plus
Tlk-PG 1489 CG34412-PG 162..375 26..251 272 35 Plus
Smr-PG 3607 CG4013-PG 13..307 42..312 264 31.6 Plus
Tet-PA 2860 CG43444-PA 651..1014 47..365 262 30.9 Plus
Tet-PE 2866 CG43444-PE 657..1020 47..365 262 30.9 Plus
Tet-PB 2915 CG43444-PB 707..1069 47..365 261 29.3 Plus
Tet-PF 2921 CG43444-PF 713..1075 47..365 261 29.3 Plus
Sp1-PB 520 CG1343-PB 341..500 28..217 257 40.2 Plus
Sp1-PD 715 CG1343-PD 536..695 28..217 257 40.2 Plus
Sp1-PE 720 CG1343-PE 541..700 28..217 257 40.2 Plus
Sp1-PF 726 CG1343-PF 536..695 28..217 257 40.2 Plus
ovo-PC 1222 CG6824-PC 778..1070 112..423 256 30.1 Plus
ovo-PE 1351 CG6824-PE 907..1199 112..423 256 30.1 Plus
ovo-PB 1351 CG6824-PB 907..1199 112..423 256 30.1 Plus
cpo-PY 606 CG43738-PY 181..411 121..359 250 33.9 Plus
cpo-PX 606 CG43738-PX 181..411 121..359 250 33.9 Plus
cpo-PW 606 CG43738-PW 181..411 121..359 250 33.9 Plus
cpo-PU 606 CG43738-PU 181..411 121..359 250 33.9 Plus
cpo-PN 606 CG43738-PN 181..411 121..359 250 33.9 Plus
cpo-PV 607 CG43738-PV 181..411 121..359 250 33.9 Plus
cpo-PT 607 CG43738-PT 181..411 121..359 250 33.9 Plus
cpo-PO 748 CG43738-PO 181..411 121..359 250 33.9 Plus
cpo-PR 749 CG43738-PR 181..411 121..359 250 33.9 Plus
cpo-PQ 762 CG43738-PQ 181..411 121..359 250 33.9 Plus
cpo-PP 841 CG43738-PP 181..411 121..359 250 33.9 Plus
cpo-PS 962 CG43738-PS 181..411 121..359 250 33.9 Plus
fs(1)h-PB 2038 CG2252-PB 1289..1569 31..217 249 33.1 Plus
fs(1)h-PG 2046 CG2252-PG 1297..1577 31..217 249 33.1 Plus
CG43347-PD 2652 CG43347-PD 1474..1605 85..214 248 46.7 Plus
CG43347-PB 2666 CG43347-PB 1488..1619 85..214 248 46.7 Plus
CG43347-PC 2684 CG43347-PC 1506..1637 85..214 248 46.7 Plus
pnt-PC 623 CG17077-PC 9..331 67..381 247 27.2 Plus
fs(1)h-PB 2038 CG2252-PB 1466..1811 80..355 241 30.5 Plus
fs(1)h-PG 2046 CG2252-PG 1474..1819 80..355 241 30.5 Plus
cpo-PY 606 CG43738-PY 181..412 120..358 240 33.6 Plus
cpo-PX 606 CG43738-PX 181..412 120..358 240 33.6 Plus
cpo-PW 606 CG43738-PW 181..412 120..358 240 33.6 Plus
cpo-PU 606 CG43738-PU 181..412 120..358 240 33.6 Plus
cpo-PN 606 CG43738-PN 181..412 120..358 240 33.6 Plus
cpo-PV 607 CG43738-PV 181..412 120..358 240 33.6 Plus
cpo-PT 607 CG43738-PT 181..412 120..358 240 33.6 Plus
cpo-PO 748 CG43738-PO 181..412 120..358 240 33.6 Plus
cpo-PR 749 CG43738-PR 181..412 120..358 240 33.6 Plus
cpo-PQ 762 CG43738-PQ 181..412 120..358 240 33.6 Plus
cpo-PP 841 CG43738-PP 181..412 120..358 240 33.6 Plus
cpo-PS 962 CG43738-PS 181..412 120..358 240 33.6 Plus
CG43347-PD 2652 CG43347-PD 1465..1751 82..398 233 29.1 Plus
CG43347-PB 2666 CG43347-PB 1479..1765 82..398 233 29.1 Plus
CG43347-PC 2684 CG43347-PC 1497..1783 82..398 233 29.1 Plus
Smr-PF 3601 CG4013-PF 357..693 14..249 222 27.8 Plus
Smr-PE 3601 CG4013-PE 357..693 14..249 222 27.8 Plus
Smr-PD 3601 CG4013-PD 357..693 14..249 222 27.8 Plus
Smr-PG 3607 CG4013-PG 363..699 14..249 222 27.8 Plus
ovo-PC 1222 CG6824-PC 707..932 130..377 215 32.1 Plus
ovo-PE 1351 CG6824-PE 836..1061 130..377 215 32.1 Plus
ovo-PB 1351 CG6824-PB 836..1061 130..377 215 32.1 Plus
CG43347-PD 2652 CG43347-PD 80..500 2..364 210 21.8 Plus
CG43347-PB 2666 CG43347-PB 80..500 2..364 210 21.8 Plus
CG43347-PC 2684 CG43347-PC 80..500 2..364 210 21.8 Plus
cpo-PP 841 CG43738-PP 648..822 33..221 198 32 Plus
Tet-PA 2860 CG43444-PA 975..1183 38..241 186 30.6 Plus
Tet-PE 2866 CG43444-PE 981..1189 38..241 186 30.6 Plus
Tet-PB 2915 CG43444-PB 1030..1238 38..241 186 30.6 Plus
Tet-PF 2921 CG43444-PF 1036..1244 38..241 186 30.6 Plus
Tlk-PG 1489 CG34412-PG 552..720 18..211 177 28.4 Plus
cpo-PP 841 CG43738-PP 673..833 17..185 174 33 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12193-PA 585 GI12193-PA 326..585 377..647 1384 92.3 Plus
Dmoj\GI12192-PA 425 GI12192-PA 264..313 238..285 228 86 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:15:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17823-PA 284 GL17823-PA 35..284 398..647 1387 99.2 Plus
Dper\GL20006-PA 110 GL20006-PA 5..60 412..467 304 92.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:15:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28498-PA 592 GA28498-PA 333..592 377..647 1396 93 Plus
Dpse\GA28497-PA 441 GA28497-PA 275..317 242..284 240 90.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:16:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24985-PA 581 GM24985-PA 322..581 377..647 1399 93.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13032-PA 647 GD13032-PA 40..647 41..647 3080 97.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:16:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11425-PA 706 GJ11425-PA 424..706 365..647 1477 97.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:16:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10510-PA 610 GK10510-PA 346..610 377..647 1298 89.1 Plus
Dwil\GK10478-PA 466 GK10478-PA 253..333 216..282 233 69.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:16:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20386-PA 586 GE20386-PA 327..586 377..647 1399 93.7 Plus
Dyak\GE20385-PA 416 GE20385-PA 228..403 219..399 343 85.2 Plus

GH27708.hyp Sequence

Translation from 769 to 2712

> GH27708.hyp
MSSDTNSCTSFFAQEHANATLSQYFQQLNSHVAAAAAGNSGGNSSSSNNN
NSSGNNSSSGNSDSGNDGSMTGSSGTMDNHRSSVSSNDSGKSSATGGGGA
GATSNNGVNAWALQQQQQTAALHHQQQQQHQQQQQHQQHLQQHHQAHHQH
VLQQQQQQQQQHSQHQHQQQHHGHPLHPHHTHQQQQQQQQQQQPPPQHHQ
QQQQQHAQQQQQQHHAAQLAHTLSSAAVAAAAGNTGGNTNPHSIFGTGNF
HYKTNNSWTLPTLTYQRIYQENPHYQRNSFMDPQSNAAAAAAAAAASCNA
AAVAAAAAVASGNQGSNGNASGNGNAVVAATGNGNGGNPGQNNNNNNGNN
SGNSNNNSNNNVSSVQHVANAVAAAVIANEHHNHLNSLKARFQPASSGRK
SPFLGFICKSNGKSTSNSKEIICPDDKYKEEGDIWNVEAQTAFLGPNLWD
KTLPYDADLKVTQYADLDEFLSENNIPDGLPGTHLGHSSGLGHRSDSLGH
AAGLSLGLGHITTKRERSPSPSDCISPDTLNPPSPAESTFSFASSGRDFD
PRTRAFSDEELKPQPMIKKSRKQFVPDELKDDKYWARRRKNNIAAKRSRD
ARRQKENQIAMRARYLEKENATLHQEVEQLKQENMDLRARLSKFQDV*

GH27708.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:44:04
Subject Length Description Subject Range Query Range Score Percent Strand
Pdp1-PD 647 CG17888-PD 1..647 1..647 3432 100 Plus
Pdp1-PJ 633 CG17888-PJ 1..633 1..647 3330 97.8 Plus
Pdp1-PL 581 CG17888-PL 3..581 113..647 1500 56.6 Plus
Pdp1-PC 570 CG17888-PC 15..570 157..647 1419 57.4 Plus
Pdp1-PO 264 CG17888-PO 15..264 398..647 1320 100 Plus