BDGP Sequence Production Resources |
Search the DGRC for GH27756
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 277 |
Well: | 56 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4955-RA |
Protein status: | GH27756.pep: gold |
Preliminary Size: | 1855 |
Sequenced Size: | 1822 |
Gene | Date | Evidence |
---|---|---|
CG4955 | 2001-01-01 | Release 2 assignment |
CG4955 | 2001-07-04 | Blastp of sequenced clone |
CG4955 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4955 | 2008-04-29 | Release 5.5 accounting |
CG4955 | 2008-08-15 | Release 5.9 accounting |
CG4955 | 2008-12-18 | 5.12 accounting |
1822 bp (1822 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051627
> GH27756.complete TGTAGACCCAGAAATCGATAGTGTATACTTTAGACCTTTACAGCTTGCCA CTTCTCCTCCAGTTGGACCAAGATCAGAATGGAGAGGCGAAGACCCCGAA AGTCCTCGCGTAAATACGTGTGCTCCAAATCAAACTCTTCAGTTGGAGGA GGAGTAGAGGAAGACAGTGGCTCATCATTGCCTGCCACCGCCAAAGCGTT ACTCCTCCAGCCGGACGGTAATAAAGCACCAACCATGACATCCCTTCTGG GCGAACGACTCAGAAGAGTTTCTCGCATCGCAAGAGCTCCGCACAGCCTA CAAGTTACCGAAAATCCAGAAGAAGGTGGAGCACCAATCGTACCACTAAG AGAATCCGGCGCATCGGAAGTGTCAGAAGTAAATCCGGGGGTTATGGTCA TTCCGGAGTCGGCCAGTCCCCGGGGATCGGCGGTGCATGGACAACACGCT AGCTTGGTCTTCAGTGCTGAAGCCAGGGATTCGGACAGTACGCGGATATC GGAGGAAATGGTGGAAGTGTTCCAAACCTCTTCGGCGAGAACCACATCCA ATGAGCCCGCAGGGGGCAATCTGCGCTTTGAAACCACTCCCGTGGCTGTA AGCGAAAGTATGGTTGGCAATATAAACTTCTCCCCGAACGCCATCTACGA TCAGAACAGGTATAGCAGCATGATGTCCAACGGGGATTACAATAATGGCA ACAGGGGTGAGAGTGAGAGGAGCGTGGGAGCCTGCCACCATGGTTGGGCG GCGCGACAACAACAAGTTGCCGCTGGACCTGCCGGCAGAGACACCCTGGG ATTCGCCATCAGTCTGGGCGCCGCTAATTTGGGCCAGAACCGATGCAGTC TGGGCGTTGCATGCGATGAGGACTGTGGCTATGGAACTGGCTGTGATTTT GGATGCGGTCAGGCCCATGGCGTTGATCCCGGAAGCTTTCTAGGTCCGGG AACCATGGGAACTGGTCCATTAATATTGACAACGGGATCAGGAGGCCCAC CTGTACAGAGCGCCCTACGAGGAGCTCAAGGTGGCGGCTATAAGCAAGTT GGCGCCGGGCAGCGGGGAACTTTTGGAACAGATTTCGGAAGTGAGCAGCT TAACTTCTTCATTACCTTCCTATTGGAGGTCCTCGGTGTTTTAGTTTTTT TTGCCATCTGCACGATAACATTTTGGATTACTCTGGGCTACCATGTTGTC CAGTTGCTGGTGGACCTGAAGAACGCCGATCGCAACATTCAGGTGGCGGT GGCCATTGTGTTCGGGCTGCTGCTCGTTGCGTTTGCCATATCGCAGGTGA CCAACCTCAGTGGTTCCTGCTGTCATTCACGGGATCGAGCCCGTTCCAGA ACCAAAGGTGGTGGCATTGGCTTCTTTCACAGATCCACCAAGCCAAAGAC CAAGAGCTGTGCATCCAAAACCAAGACCTGTGCTCATAAGCCGAAGATTA AGAAGGCAGCCACTTGTGGACCCAGCCTGGGCTTTCACACGCACCGCAAA ACGAGGTATACGGATTGCGAGGGACGGGCAATTTTCTTGAGCTCGAGACG ATATGCTATTCCGACTGAGATGAAACAACCACCCACCATTGTGCTCTGGA TGCGCGACACACTGGTTCGCATGTTGCAGTAACCACCAACGAAGCCCCAC GTTGGGCGCCAATAATACTTAAACTGACTTAAGACTGCGAAACTATACGT ATTGCCTGGAAACACGAACCATTCGATCATTTGCAAAAATTTCAATTTGA ATAAACTTTAAAAAAAAACTTTTGTAGGTAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16971045..16972189 | 1..1145 | 99 | -> | Plus |
chrX | 16972262..16972895 | 1146..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4955-RA | 1..1554 | 79..1632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4955-RA | 1..1554 | 79..1632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4955-RA | 1..1554 | 79..1632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4955-RA | 1..1554 | 79..1632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4955-RA | 1..1554 | 79..1632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4955-RA | 1..1779 | 1..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4955-RA | 1..1779 | 1..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4955-RA | 1..1779 | 1..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4955-RA | 1..1779 | 1..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4955-RA | 60..1838 | 1..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17081506..17082650 | 1..1145 | 100 | -> | Plus |
X | 17082723..17083356 | 1146..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17081506..17082650 | 1..1145 | 100 | -> | Plus |
X | 17082723..17083356 | 1146..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17081506..17082650 | 1..1145 | 100 | -> | Plus |
X | 17082723..17083356 | 1146..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16975539..16976683 | 1..1145 | 100 | -> | Plus |
arm_X | 16976756..16977389 | 1146..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17089604..17090748 | 1..1145 | 100 | -> | Plus |
X | 17090821..17091454 | 1146..1779 | 99 | Plus |
Translation from 78 to 1631
> GH27756.hyp MERRRPRKSSRKYVCSKSNSSVGGGVEEDSGSSLPATAKALLLQPDGNKA PTMTSLLGERLRRVSRIARAPHSLQVTENPEEGGAPIVPLRESGASEVSE VNPGVMVIPESASPRGSAVHGQHASLVFSAEARDSDSTRISEEMVEVFQT SSARTTSNEPAGGNLRFETTPVAVSESMVGNINFSPNAIYDQNRYSSMMS NGDYNNGNRGESERSVGACHHGWAARQQQVAAGPAGRDTLGFAISLGAAN LGQNRCSLGVACDEDCGYGTGCDFGCGQAHGVDPGSFLGPGTMGTGPLIL TTGSGGPPVQSALRGAQGGGYKQVGAGQRGTFGTDFGSEQLNFFITFLLE VLGVLVFFAICTITFWITLGYHVVQLLVDLKNADRNIQVAVAIVFGLLLV AFAISQVTNLSGSCCHSRDRARSRTKGGGIGFFHRSTKPKTKSCASKTKT CAHKPKIKKAATCGPSLGFHTHRKTRYTDCEGRAIFLSSRRYAIPTEMKQ PPTIVLWMRDTLVRMLQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4955-PA | 517 | CG4955-PA | 1..517 | 1..517 | 2695 | 100 | Plus |
Translation from 78 to 1631
> GH27756.pep MERRRPRKSSRKYVCSKSNSSVGGGVEEDSGSSLPATAKALLLQPDGNKA PTMTSLLGERLRRVSRIARAPHSLQVTENPEEGGAPIVPLRESGASEVSE VNPGVMVIPESASPRGSAVHGQHASLVFSAEARDSDSTRISEEMVEVFQT SSARTTSNEPAGGNLRFETTPVAVSESMVGNINFSPNAIYDQNRYSSMMS NGDYNNGNRGESERSVGACHHGWAARQQQVAAGPAGRDTLGFAISLGAAN LGQNRCSLGVACDEDCGYGTGCDFGCGQAHGVDPGSFLGPGTMGTGPLIL TTGSGGPPVQSALRGAQGGGYKQVGAGQRGTFGTDFGSEQLNFFITFLLE VLGVLVFFAICTITFWITLGYHVVQLLVDLKNADRNIQVAVAIVFGLLLV AFAISQVTNLSGSCCHSRDRARSRTKGGGIGFFHRSTKPKTKSCASKTKT CAHKPKIKKAATCGPSLGFHTHRKTRYTDCEGRAIFLSSRRYAIPTEMKQ PPTIVLWMRDTLVRMLQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21741-PA | 455 | GF21741-PA | 263..455 | 336..517 | 599 | 63.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19095-PA | 513 | GG19095-PA | 1..513 | 1..517 | 2123 | 80.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17622-PA | 284 | GH17622-PA | 111..281 | 338..516 | 315 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4955-PA | 517 | CG4955-PA | 1..517 | 1..517 | 2695 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14797-PA | 409 | GI14797-PA | 221..402 | 338..512 | 382 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18276-PA | 459 | GL18276-PA | 236..457 | 336..516 | 387 | 38.6 | Plus |
Dper\GL15823-PA | 515 | GL15823-PA | 285..513 | 336..516 | 357 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18552-PA | 442 | GA18552-PA | 223..440 | 336..516 | 400 | 39.9 | Plus |
Dpse\GA26092-PA | 515 | GA26092-PA | 285..513 | 336..516 | 347 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13483-PA | 509 | GM13483-PA | 1..509 | 1..517 | 2239 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17326-PA | 491 | GD17326-PA | 1..490 | 1..494 | 2251 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19462-PA | 317 | GJ19462-PA | 46..310 | 236..512 | 451 | 39.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15481-PA | 505 | GK15481-PA | 196..504 | 236..517 | 527 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17641-PA | 509 | GE17641-PA | 1..509 | 1..517 | 1940 | 75.9 | Plus |