BDGP Sequence Production Resources |
Search the DGRC for GH27792
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 277 |
Well: | 92 |
Vector: | pOT2 |
Associated Gene/Transcript | CG2865-RA |
Protein status: | GH27792.pep: gold |
Preliminary Size: | 1535 |
Sequenced Size: | 1452 |
Gene | Date | Evidence |
---|---|---|
CG2865 | 2001-09-19 | Blastp of sequenced clone |
CG2865 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2865 | 2008-04-29 | Release 5.5 accounting |
CG2865 | 2008-08-15 | Release 5.9 accounting |
CG2865 | 2008-12-18 | 5.12 accounting |
1452 bp (1452 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058474
> GH27792.complete AGAAAACCACATAAACAAGCCAGCAAACAAGGCACACACTTGCTTGAAAA ACGCACAATGACCTTGCCCACAAACACACACGCATCTGCAAACGACGGCG GCAGCGGCAACAACAACCACAGCAATATCAGCAGTAACAACAGCAGCAGC AGCGACGAAGACTCAGACATGTTTGGACCACCCCGCTGCTCCCCGCCCAT CGGCTATCACCATCACCGTTCCCGTGTGCCCATGATCTCGCCAAAGCTGC GGCAGCGCGAGGAGCGCAAGCGGATCCTCCAGCTCTGCGCCCACAAGATG GAGAGGATCAAGGACTCGGAGGCGAACCTGCGGCGCAGCGTCTGCATCAA CAACACCTACTGCCGCCTGAATGACGAACTGCGGCGCGAGAAGCAGATGC GCTACCTCCAGAATCTGCCCAGAACCAGCGACAGCGGCGCAAGCACCGAA CTGGCGCGTGAGAATCTCTTCCAGCCGAACATGGACGACGCCAAGCCGGC CGGCAATAGCACTAGCAATAATATCAACGCCAACGGCAAGCCTTCATCCT CTTTTGGCGATGCCTTTGGCTCCTCAAACGGATCATCGTCGGGTCGCGGC GGAATTTGCTCCCTGGAGAATCAACCGCCCGAGCGTCAGCAGTTGGGGAC GCCCGCTGGTGCCTCCGCTCCCGAGGCGGCCAATTCGGCGCCCCTTTCCG TTTCGGGCTCGGCATCGGAACGCGTGAATAACCGAAAACGCCACCTGTCC AGCTGCAACTTGGTCAACGATCTGGAAATACTGGACAGGGAGCTGAGCGC CATCAATGCACCCATGCTGCTAATCGATCCAGAGATTACCCAAGGAGCCG AACAGCTGGAGAAGGCCGCCTTGTCCGCCAGCAGGAAGAGATTGAGGAGC AATAGCGGCAGCGAGGACGAAAGTGATCGCCTGGTGCGCGAGGCTCTGTC CCAGTTCTACATACCGCCACAGCGCCTCATCTCCGCCATTGAGGAGTGTC CCCTGGATGTGGTTGGCTTGGGTATGGGAATGAATGTGAATGTGAATGTG GGAGGAATTAGTGGAATCGGTGGCATCGGAGGAGCTGCAGGCGCTGGCGT CGAAATGCCCGGAGGCAAACGGATGAAGCTGAATGACCATCACCATCTCA ATCACCATCACCATTTGCACCATCATCTGGAGCTGGTCGATTTCGACATG AACCAAAACCAAAAGGATTTCGAGGTGATCATGGACGCCTTGAGGCTGGG AACGGCGACACCGCCGAGCGGCGCCAGCAGCGATTCTTGCGGACAGGCGG CGATGATGAGCGAGTCGGCCAGCGTGTTCCACAATCTGGTGGTCACCTCG TTGGAGACATGAAAGTACCAGTGAATCCCCGAGCAGCAGACAAAGATTAA AATGTTTAGATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6860 | 8..156 | 210 | 64.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2337..2430 | 68..162 | 202 | 69.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6809 | 69..153 | 199 | 74.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2382 | 78..156 | 193 | 72.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2424..2527 | 68..169 | 191 | 66.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6788 | 91..153 | 189 | 77.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6811..6887 | 82..156 | 182 | 72.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2358 | 100..153 | 180 | 81.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1077..1139 | 91..153 | 180 | 76.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2397..2475 | 83..162 | 172 | 70 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2698..2832 | 14..150 | 166 | 61.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..6821 | 68..153 | 164 | 68.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1096..1168 | 101..172 | 164 | 71.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1482..1571 | 73..158 | 162 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1501..1587 | 61..150 | 162 | 68.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2788..2856 | 91..156 | 158 | 72.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1040..1126 | 71..158 | 158 | 65.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2439 | 99..156 | 155 | 74.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2602..2666 | 91..158 | 153 | 72.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6767 | 108..153 | 149 | 80.4 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 972..1040 | 108..177 | 149 | 70 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2789..2856 | 82..150 | 144 | 69.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2733..2823 | 69..156 | 141 | 64.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6839..6920 | 71..156 | 141 | 66.3 | Plus |
TART-A | 13424 | TART-A 13424bp | 911..1003 | 127..223 | 141 | 64.9 | Plus |
TART-A | 13424 | TART-A 13424bp | 12089..12181 | 127..223 | 141 | 64.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2581..2648 | 93..158 | 137 | 71 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3239..3369 | 92..215 | 134 | 59.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2346 | 122..162 | 124 | 78 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2897..2938 | 107..148 | 120 | 76.2 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1061..1093 | 120..152 | 120 | 84.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6746 | 125..153 | 118 | 89.7 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 122..199 | 83..155 | 116 | 66.7 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9152..9229 | 83..155 | 116 | 66.7 | Plus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 530..615 | 107..192 | 114 | 62.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 2186280..2186548 | 154..422 | 100 | == | Minus |
chrX | 2186612..2186701 | 1..90 | 100 | Minus | |
chrX | 2175473..2176464 | 423..1414 | 95 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2865-RA | 1..1305 | 58..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2865-RA | 1..1305 | 58..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2865-RA | 1..1305 | 58..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2865-RA | 1..1305 | 58..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2865-RA | 1..1305 | 58..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2865-RA | 1..1414 | 1..1414 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2865-RA | 1..1414 | 1..1414 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2865-RA | 666..2079 | 1..1414 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2865-RA | 1..1414 | 1..1414 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2865-RA | 666..2079 | 1..1414 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2281526..2282517 | 423..1414 | 100 | <- | Minus |
X | 2292325..2292746 | 1..422 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2281526..2282517 | 423..1414 | 100 | <- | Minus |
X | 2292325..2292746 | 1..422 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2281526..2282517 | 423..1414 | 100 | <- | Minus |
X | 2292325..2292746 | 1..422 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 2175559..2176550 | 423..1414 | 100 | <- | Minus |
arm_X | 2186358..2186779 | 1..422 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2289624..2290615 | 423..1414 | 100 | <- | Minus |
X | 2300423..2300844 | 1..422 | 100 | Minus |
Translation from 0 to 1361
> GH27792.hyp RKPHKQASKQGTHLLEKRTMTLPTNTHASANDGGSGNNNHSNISSNNSSS SDEDSDMFGPPRCSPPIGYHHHRSRVPMISPKLRQREERKRILQLCAHKM ERIKDSEANLRRSVCINNTYCRLNDELRREKQMRYLQNLPRTSDSGASTE LARENLFQPNMDDAKPAGNSTSNNINANGKPSSSFGDAFGSSNGSSSGRG GICSLENQPPERQQLGTPAGASAPEAANSAPLSVSGSASERVNNRKRHLS SCNLVNDLEILDRELSAINAPMLLIDPEITQGAEQLEKAALSASRKRLRS NSGSEDESDRLVREALSQFYIPPQRLISAIEECPLDVVGLGMGMNVNVNV GGISGIGGIGGAAGAGVEMPGGKRMKLNDHHHLNHHHHLHHHLELVDFDM NQNQKDFEVIMDALRLGTATPPSGASSDSCGQAAMMSESASVFHNLVVTS LET*
Translation from 57 to 1361
> GH27792.pep MTLPTNTHASANDGGSGNNNHSNISSNNSSSSDEDSDMFGPPRCSPPIGY HHHRSRVPMISPKLRQREERKRILQLCAHKMERIKDSEANLRRSVCINNT YCRLNDELRREKQMRYLQNLPRTSDSGASTELARENLFQPNMDDAKPAGN STSNNINANGKPSSSFGDAFGSSNGSSSGRGGICSLENQPPERQQLGTPA GASAPEAANSAPLSVSGSASERVNNRKRHLSSCNLVNDLEILDRELSAIN APMLLIDPEITQGAEQLEKAALSASRKRLRSNSGSEDESDRLVREALSQF YIPPQRLISAIEECPLDVVGLGMGMNVNVNVGGISGIGGIGGAAGAGVEM PGGKRMKLNDHHHLNHHHHLHHHLELVDFDMNQNQKDFEVIMDALRLGTA TPPSGASSDSCGQAAMMSESASVFHNLVVTSLET*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21960-PA | 118 | GF21960-PA | 1..116 | 1..122 | 485 | 82.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12624-PA | 450 | GG12624-PA | 1..450 | 1..434 | 1751 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24251-PA | 416 | GH24251-PA | 22..416 | 33..434 | 1128 | 63.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2865-PB | 434 | CG2865-PB | 1..434 | 1..434 | 2252 | 100 | Plus |
CG2865-PA | 434 | CG2865-PA | 1..434 | 1..434 | 2252 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21445-PA | 435 | GI21445-PA | 1..435 | 1..434 | 1230 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13382-PA | 440 | GL13382-PA | 1..440 | 1..434 | 1242 | 62.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15493-PA | 443 | GA15493-PA | 1..443 | 1..434 | 1235 | 61.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18890-PA | 122 | GM18890-PA | 1..122 | 1..122 | 650 | 98.4 | Plus |
Dsec\GM18891-PA | 108 | GM18891-PA | 1..108 | 327..434 | 557 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16372-PA | 430 | GD16372-PA | 1..430 | 1..434 | 1475 | 70.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16466-PA | 406 | GJ16466-PA | 1..406 | 1..434 | 1267 | 63.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10297-PA | 532 | GK10297-PA | 287..532 | 226..434 | 606 | 62.5 | Plus |
Dwil\GK10297-PA | 532 | GK10297-PA | 1..143 | 1..147 | 559 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16954-PA | 439 | GE16954-PA | 1..439 | 1..434 | 1763 | 91.4 | Plus |