BDGP Sequence Production Resources |
Search the DGRC for GH27814
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 278 |
Well: | 14 |
Vector: | pOT2 |
Associated Gene/Transcript | NC2alpha-RB |
Protein status: | GH27814.pep: wuzgold |
Sequenced Size: | 1423 |
Gene | Date | Evidence |
---|---|---|
CG10318 | 2002-11-11 | Blastp of sequenced clone |
CG10318 | 2003-01-01 | Sim4 clustering to Release 3 |
NC2alpha | 2008-04-29 | Release 5.5 accounting |
NC2alpha | 2008-08-15 | Release 5.9 accounting |
NC2alpha | 2008-12-18 | 5.12 accounting |
1423 bp (1423 high quality bases) assembled on 2002-11-11
GenBank Submission: BT001451
> GH27814.complete TTTTATTTCACTAGGACTCTTGACGATTACTTCACAAATCGGAAAATGCC ATCGAAAAAGAAAAAATACAACGCACGCTTTCCGGCGGTAAGTTGAAACC ACCGATTGGCGACAGGAAAGCTCCAGCCATTTGGCGGCCGTGAACGCCGA AGATGGGTTATCAGTTTTCGTGCATGTGTACATACATATGTACATACACG CCTCGCATAATCAGAGGCTCAAAAGAAGTAGAGGAGAAACCAAACCGGTG CGAGATTATAATGTTTCCAAACCATTACCATAAACTCCTTGCAGGGTCGC ATCAAGAAGATCATGCAAAGCGACGAGGAAATCGGGAAGGTGGCCCAGGC GGTGCCTGTTATCATCTCACGCACGCTGGAGCTCTTCGTGGAGTCGCTGC TGACCAAGACGCTGCGCATCACGAATGCGCGCAACGCCAAGACGCTATCG CCATCGCACATGAGGCAGTGTATCGTATCCGAGAAACGCTTTGACTTCCT CAAGGAGCTGGTCCGCAACATACCCGACATCAGTGTGGCCGAGGAGGCCG CCTACAACGAGGACGATGTGTTACGCAGCTCGCCAGAGGAACAGTATCCA GATTCAGACACGCCATATGATCTTAGCCTGCCATCGACGTCAATGCGCTC GCAGGCGAACGGCACAGCTGCCTACATGCGCTCCATGAGTCTGAACAACG GAGCCGGATCGGGCGGAGGAGCCGCAGCCACCAAGCGGCAGTTTCAGTCG CAGCACTCCACCCAGGAAACTCCCACCACCAGCACCACCCTGCCCGCCAA GCTGGCCCGCTCCGGGTCCATGCCGGCCTACACGCCACGGGGCAGACCGC CCAATCACCTCAAGAAACAGTCGGTGCAGCTCGATACTGCCATACCCGCC CCGATCTGCAACTACGAACTCAACAAGCCCATTGTCAAGATCGACTACAG CCACGTGCAAATGCCGACGGCGAACCTGTGCACACCGGACGCCTCTGATT CTGGGTCAGGATCGGGCGCCGGATCTGGAGCTTTTAACTTCGACATAGCT GCTCCGGTGATCAATATCGATCTGACGAATATCGTGGCCGGTGGAGCACC TGGCAGTGGTGTGCCCCCCGCCTCTATTGGATTACCAGCGGCCACGCCGG GGGACAACAATAATGTGAACCAAATGGCTGGAAAGAGCAGCGCTCCCATC ATTCCAAAGGCCACAGCGGCATCAGCGACCCCCACTGAAACCGTTTTCGA ATTAGACGAAGACTATGACAATATTTGATTAGGATCTATGTGAATGCGCT TTTAAATTATTGATACATTAATATGTACTCTAGGTCTAAGAAATCACAAT AACATTTTTTGCAAAATAAAGACCATGCTGGATTTTAAGCTGAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
NC2alpha-RB | 1392 | NC2alpha-RB | 1..1392 | 1..1392 | 6960 | 100 | Plus |
NC2alpha-RA | 1371 | NC2alpha-RA | 212..1311 | 294..1393 | 5500 | 100 | Plus |
NC2alpha-RA | 1371 | NC2alpha-RA | 126..213 | 1..88 | 440 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17556652..17558043 | 1..1392 | 6915 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21670202..21671594 | 1..1393 | 6965 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21671401..21672793 | 1..1393 | 6965 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\INE-1 | 1467 | Dbuz\INE-1 ISBU1 1467bp | 434..499 | 143..209 | 116 | 67.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17556652..17558043 | 1..1392 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NC2alpha-RA | 36..1026 | 286..1278 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NC2alpha-RA | 36..1026 | 286..1278 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NC2alpha-RA | 36..1026 | 286..1278 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NC2alpha-RA | 36..1026 | 286..1278 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NC2alpha-RA | 36..1026 | 286..1278 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NC2alpha-RB | 1..1392 | 1..1392 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NC2alpha-RB | 1..1392 | 1..1392 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NC2alpha-RA | 131..1235 | 286..1392 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NC2alpha-RB | 1..1392 | 1..1392 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NC2alpha-RA | 131..1235 | 286..1392 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21670202..21671593 | 1..1392 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21670202..21671593 | 1..1392 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21670202..21671593 | 1..1392 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17557707..17559098 | 1..1392 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21671401..21672792 | 1..1392 | 100 | Plus |
Translation from 312 to 1277
> GH27814.hyp MQSDEEIGKVAQAVPVIISRTLELFVESLLTKTLRITNARNAKTLSPSHM RQCIVSEKRFDFLKELVRNIPDISVAEEAAYNEDDVLRSSPEEQYPDSDT PYDLSLPSTSMRSQANGTAAYMRSMSLNNGAGSGGGAAATKRQFQSQHST QETPTTSTTLPAKLARSGSMPAYTPRGRPPNHLKKQSVQLDTAIPAPICN YELNKPIVKIDYSHVQMPTANLCTPDASDSGSGSGAGSGAFNFDIAAPVI NIDLTNIVAGGAPGSGVPPASIGLPAATPGDNNNVNQMAGKSSAPIIPKA TAASATPTETVFELDEDYDNI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
NC2alpha-PA | 341 | CG10318-PA | 21..341 | 1..321 | 1638 | 100 | Plus |
Translation from 312 to 1277
> GH27814.pep MQSDEEIGKVAQAVPVIISRTLELFVESLLTKTLRITNARNAKTLSPSHM RQCIVSEKRFDFLKELVRNIPDISVAEEAAYNEDDVLRSSPEEQYPDSDT PYDLSLPSTSMRSQANGTAAYMRSMSLNNGAGSGGGAAATKRQFQSQHST QETPTTSTTLPAKLARSGSMPAYTPRGRPPNHLKKQSVQLDTAIPAPICN YELNKPIVKIDYSHVQMPTANLCTPDASDSGSGSGAGSGAFNFDIAAPVI NIDLTNIVAGGAPGSGVPPASIGLPAATPGDNNNVNQMAGKSSAPIIPKA TAASATPTETVFELDEDYDNI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13258-PA | 347 | GF13258-PA | 21..347 | 1..321 | 1113 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22128-PA | 342 | GG22128-PA | 21..342 | 1..321 | 1408 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22636-PA | 357 | GH22636-PA | 21..357 | 1..321 | 926 | 61.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
NC2alpha-PA | 341 | CG10318-PA | 21..341 | 1..321 | 1638 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18330-PA | 351 | GI18330-PA | 21..351 | 1..321 | 872 | 59.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10800-PA | 316 | GL10800-PA | 21..316 | 1..321 | 985 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10241-PA | 316 | GA10241-PA | 21..316 | 1..321 | 985 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15852-PA | 336 | GM15852-PA | 21..336 | 1..321 | 1377 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11613-PA | 343 | GD11613-PA | 21..343 | 1..321 | 1630 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19756-PA | 350 | GJ19756-PA | 21..350 | 1..321 | 931 | 61.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10735-PA | 375 | GK10735-PA | 21..375 | 1..321 | 895 | 60.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12211-PA | 342 | GE12211-PA | 21..342 | 1..321 | 1451 | 94.7 | Plus |