BDGP Sequence Production Resources |
Search the DGRC for GH27834
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 278 |
Well: | 34 |
Vector: | pOT2 |
Associated Gene/Transcript | CG12159-RB |
Protein status: | GH27834.pep: gold |
Preliminary Size: | 720 |
Sequenced Size: | 868 |
Gene | Date | Evidence |
---|---|---|
CG12159 | 2002-01-01 | Sim4 clustering to Release 2 |
CG12159 | 2002-05-18 | Blastp of sequenced clone |
CG12159 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12159 | 2008-04-29 | Release 5.5 accounting |
CG12159 | 2008-08-15 | Release 5.9 accounting |
CG12159 | 2008-12-18 | 5.12 accounting |
868 bp (868 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118826
> GH27834.complete CAACTCTGACGCCAAGCAAAACAAAAACAGTGCAGCAAAGAAATTTAAAA GGTCATTGTTTATGCTTAGAAGCGGCTATATTTAGTAATTTTGATAGTTG GATACGAAAAGATGTCCTGTCGCTGCTTCTGCTTAGTGGCTGCAGCACTG CTGCTGCTGTTCTTCCACCAGCAATCCTGTGACGCAGCCACCCAGACGCC CCAAAAGACGGTGGTAATTGCGGAGCAGAGTGCGCCGGCTGCTGAGGTGG AGGCCAAAAAGCCAGTCGTGAAGAAATCGCAAGCAGAGAATCCTCCGGCA GGACCAAAGGATTCTATGGTGGTCGTAGACGATGGCGGACCTGCTCCGGT TGCTCCAGGTGCTTCGGTTGCCACACAAGTTTCACCAGGAGATGCCAAGG CACCGGAAATGGTGCAGCCTCCGGGAGGTCTTCCCGTGGATGATGTTCAT GTTGAACGCTCTCCCATGTCCCCCGATGTGGACTTTCCGGGCCAGGCTGT TGTCTACATCCTCGTGGGAATCACCAGTACTGCAATACTGCTGCTTATTA TGAGGGTTTATAGGCTCCGACTTTCCCGGGCGGAGCGCAAGTACGGCGTG CAGGGCGACCGCGCCAACCAGGAGCTGACACCACTGCCCATGGCCATCGA GGACGTGAATAGTGACGAAGAGGACCACACCCTGTTCGAGTTGGTTCAGG TTTAACGAATCAAAAAGGAAAACAAAACCACTTGTGATAACGATTACGAT GATATGTATGCAAGGCATTAAAAATCTCATAAATACCAATGCTTTCAAAT CGCCTCTGCGTCGATGTTCCATATAAATAAATGTTATATTACATGTAAAA AAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3803274..3803837 | 564..1 | 2790 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 3802401..3802558 | 846..689 | 790 | 100 | Minus |
chr2R | 21145070 | chr2R | 3802769..3802897 | 690..562 | 645 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 7450..7539 | 167..254 | 121 | 64.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3802401..3802556 | 691..846 | 100 | <- | Minus |
chr2R | 3802769..3802895 | 564..690 | 100 | <- | Minus |
chr2R | 3803275..3803837 | 1..563 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12159-RB | 1..594 | 112..705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12159-RB | 1..594 | 112..705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12159-RB | 1..594 | 112..705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12159-RB | 1..594 | 112..705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12159-RB | 1..844 | 1..844 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12159-RB | 1..846 | 1..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12159-RB | 16..861 | 1..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12159-RB | 1..844 | 1..844 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12159-RB | 16..861 | 1..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7915027..7915182 | 691..846 | 100 | <- | Minus |
2R | 7915395..7915521 | 564..690 | 100 | <- | Minus |
2R | 7915901..7916463 | 1..563 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7915027..7915182 | 691..846 | 100 | <- | Minus |
2R | 7915395..7915521 | 564..690 | 100 | <- | Minus |
2R | 7915901..7916463 | 1..563 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7915027..7915182 | 691..846 | 100 | <- | Minus |
2R | 7915395..7915521 | 564..690 | 100 | <- | Minus |
2R | 7915901..7916463 | 1..563 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3802532..3802687 | 691..846 | 100 | <- | Minus |
arm_2R | 3802900..3803026 | 564..690 | 100 | <- | Minus |
arm_2R | 3803406..3803968 | 1..563 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7917100..7917662 | 1..563 | 100 | Minus | |
2R | 7916226..7916381 | 691..846 | 100 | <- | Minus |
2R | 7916594..7916720 | 564..690 | 100 | <- | Minus |
Translation from 111 to 704
> GH27834.pep MSCRCFCLVAAALLLLFFHQQSCDAATQTPQKTVVIAEQSAPAAEVEAKK PVVKKSQAENPPAGPKDSMVVVDDGGPAPVAPGASVATQVSPGDAKAPEM VQPPGGLPVDDVHVERSPMSPDVDFPGQAVVYILVGITSTAILLLIMRVY RLRLSRAERKYGVQGDRANQELTPLPMAIEDVNSDEEDHTLFELVQV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11234-PA | 175 | GF11234-PA | 1..175 | 13..197 | 409 | 57.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10702-PA | 187 | GG10702-PA | 1..187 | 1..197 | 677 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20586-PA | 194 | GH20586-PA | 66..186 | 79..194 | 326 | 57.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12159-PB | 197 | CG12159-PB | 1..197 | 1..197 | 1004 | 100 | Plus |
CG12159-PA | 202 | CG12159-PA | 1..194 | 1..194 | 988 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19733-PA | 198 | GI19733-PA | 23..190 | 39..194 | 360 | 52.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10388-PA | 203 | GL10388-PA | 1..195 | 1..194 | 418 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11444-PA | 203 | GA11444-PA | 1..195 | 1..194 | 416 | 50.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20748-PA | 203 | GM20748-PA | 1..195 | 1..194 | 864 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10214-PA | 200 | GD10214-PA | 1..192 | 1..194 | 887 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18424-PA | 195 | GJ18424-PA | 44..187 | 50..194 | 386 | 58.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21352-PA | 209 | GK21352-PA | 99..201 | 82..194 | 352 | 61.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23552-PA | 186 | GE23552-PA | 1..186 | 1..197 | 631 | 79.2 | Plus |
Translation from 111 to 704
> GH27834.hyp MSCRCFCLVAAALLLLFFHQQSCDAATQTPQKTVVIAEQSAPAAEVEAKK PVVKKSQAENPPAGPKDSMVVVDDGGPAPVAPGASVATQVSPGDAKAPEM VQPPGGLPVDDVHVERSPMSPDVDFPGQAVVYILVGITSTAILLLIMRVY RLRLSRAERKYGVQGDRANQELTPLPMAIEDVNSDEEDHTLFELVQV*