BDGP Sequence Production Resources |
Search the DGRC for GH27858
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 278 |
Well: | 58 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3345-RA |
Protein status: | GH27858.pep: gold |
Preliminary Size: | 2311 |
Sequenced Size: | 2411 |
Gene | Date | Evidence |
---|---|---|
CG3345 | 2001-01-01 | Release 2 assignment |
CG3345 | 2001-11-09 | Blastp of sequenced clone |
CG3345 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3345 | 2008-04-29 | Release 5.5 accounting |
CG3345 | 2008-08-15 | Release 5.9 accounting |
CG3345 | 2008-12-18 | 5.12 accounting |
2411 bp (2411 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069231
> GH27858.complete TTAAGCACAAATAATTTAGGCTACTGTAAGTTTAGAGCGACAAGATGATC GATATTTTGTCGCTGCCGCGGCGAAATAAGGTGTCCGGAAACCCGGCCCT GCTAAAGATGATCTCCTACAAGACTGGACTACCCATCAACAGTCTACCCG GATGGGAGCTGATCCCTCTTAATTGCAAGCTGCCAATGCTCAAATGTCCC GGCAATCAGGTCATATTCTCCAAGAACAAGATCGGACAGGACTTCAAGAG CGGTAAACAGGAGTTTGAGTGTTCCGTTACCGAACACATCCCGGAGTACA ATCCGCTACACGACTCCAACCTAAAGACGTTCTACTCCAATGAGCGTAAT CTGAAGCGGTTGAGGGAAAACGGTGAGATAACGCAGGACAACGATGTAAT ATGCAATCTGAAGGACTTCAATCAGCATCGCCAGGAGCTGCACAAATCGC AGTTGTACTACATTTTGCAGGCATACAAGCGGCGCGAGTCGGAGCAATAT GATCGAATGCTGATCGCCAACGCGGAGTCCATCACAAAAAAGGATCACCA GAATCTCGCAGCCCGTCACCAGTGCACTGAGGAGGTTCTTGCCAGAAAGA AACTACAGGAGCAGGAACGCCACGAAAGAAAGGTCCATCTGCTGAATATC ACATATGAGAAGTTTAAGCGCTTAGAGAACCTGGCCACCATGCAGAATAT GTTGCTGGAGCACCGCAAGATGCTGACAAACATGCGTGTAGCTGCCCACA TAAGCATGTGCCAGGATTTGATGAGAAAGCTATTGATCAAACAGAAGAAG CTCTTCCAGTTCAAAAAGGATCGGTTCAACAAAAACATGCGAATCCTGAG GAAACAACGGCTGGTAAAGAACACTGAGCACCAGATTCAGTCGTGGAGGA AGCGACTTGATGAGCGAATTGCTAATCAGCGTAGGATCGAATACCTCCTG CAGGAGGTGGAAAAAGAGCGAGAGGCGTTTATAGACAGGCACAAGGCTCA TTACAGAGAAAAGTGGCAACGGATTCAGGACGAGATTAAGGAAAGAGCTC AAAAGGCCATCACTGCTCGTCAGCCCAAAAGAAAGCGCCGCAAGAAGAAG AAGTCGACACTTCAGGAACGCAAGCCATCATTCTGCGATGAGTATCAGGC CACCTTTGAGGGATTGTTAGACAGTGATCTTTGTTACGCCTTGAATGCAG CCATTGCCATGGAGGGTCAGACCGCTCTCAGCTTCGCACCAGACGACCCC ATCTATAAGGCGGCACAATATATACTGGACTACATAATTTCTGGTTTAAA CGACGATCTCAGCGAGGATGAGTGTGCCTTGCAGGTGCTGATCTCGCGCA TTAAGGATTTTGTCTGCGATGCAAAGAAATATGTGCACTACAAAGCTTAT CAGATCATTGGATTCGCCAGAGACCACAAAGCCATGGAAGTGCCTCCGTC GATGGCCAAACAGCCGAAAAACCACTCGCGCGCCTCCCATGTATCATTTA GCGGTGTAGCCAGCACCATTGGCGTGGGCAGCTACGAGATTCATCCGTTC GTGGACGTCCGCCCGTGCAGCGAACGTCGGGCCACTCCGGCGGGATCATT AGCCTCTCTGGTTGTCAGCCAGATCGGCGAACAGGTAATACAGGACAAGG TGCGCCTGCCGCATCTAAATCGCAACCAGATCGTGTTCATAGAGCACTAC CTGGTGAAGTTTAAGCGGGATCTATTGGTGGGTCTGGACAAGCTGGTATT TGCAGCGATTCAGTGCCACTTTGAAAACCGTATGATGGAGGTACGAGAGG AGCTCCTTCTGCTTGACAGGAACTATTTGTTCGAGCAGATTGCCAGGGGT ATCCTCAGCTATGCGGTTAATCCGCTCAACTATCAGTCGGTGCTTAAGCT GGCCGTGAGCGTCCAGTCGTGTGAAATCATCTGGGAGCTGCAGCAGACGA TGCTCAAGCCAGGCATCGATCCCCGGGGCCAGAATCACCCAGTGTCCTGC GGCACCGAGCAGGAACGCGAGACCCTGGCTCTCTGCATACCCTAGGATCC TGTCAAGCAGACAGGGCAAGGAAAATTGATCTTAAAGCAGGATGCCTTAG CTCTGGCGGGAAGTAGCCCTAAAAATTACTTGTATATTTCGTTTCCGAGG CACTTACATACTTCAGAGTCCAGGAATATTCATTTTCAATATGATGTCCT AAATTTATGTACTATGTTTTCTTTTATCGTTTAAAATGCTTCCTTATAAA TAAGTTGAGTATAACTTTAAAAATCAGACACCTGGATCCTTTAGTTAAAA ACTCAAAGCTCTTGAGATTTAATCGTAGAAAACCAATAAATTTAGGTAAA TACACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3345-RA | 2562 | CG3345-RA | 206..2562 | 1..2357 | 11785 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 269491..270639 | 243..1391 | 5730 | 99.9 | Plus |
chr2L | 23010047 | chr2L | 270694..271659 | 1392..2357 | 4830 | 100 | Plus |
chr2L | 23010047 | chr2L | 269181..269422 | 1..242 | 1195 | 99.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 269181..269422 | 1..242 | 99 | -> | Plus |
chr2L | 269491..270639 | 243..1391 | 99 | -> | Plus |
chr2L | 270694..271659 | 1392..2357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3345-RA | 1..2001 | 45..2045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3345-RA | 1..2001 | 45..2045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3345-RA | 1..2001 | 45..2045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3345-RA | 1..2001 | 45..2045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3345-RA | 1..2001 | 45..2045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3345-RA | 61..2417 | 1..2357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3345-RA | 61..2417 | 1..2357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3345-RA | 61..2417 | 1..2357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3345-RA | 61..2417 | 1..2357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3345-RA | 61..2417 | 1..2357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 269148..269389 | 1..242 | 100 | -> | Plus |
2L | 269458..270606 | 243..1391 | 100 | -> | Plus |
2L | 270661..271626 | 1392..2357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 269148..269389 | 1..242 | 100 | -> | Plus |
2L | 269458..270606 | 243..1391 | 100 | -> | Plus |
2L | 270661..271626 | 1392..2357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 269148..269389 | 1..242 | 100 | -> | Plus |
2L | 269458..270606 | 243..1391 | 100 | -> | Plus |
2L | 270661..271626 | 1392..2357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 269148..269389 | 1..242 | 100 | -> | Plus |
arm_2L | 269458..270606 | 243..1391 | 100 | -> | Plus |
arm_2L | 270661..271626 | 1392..2357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 269148..269389 | 1..242 | 100 | -> | Plus |
2L | 269458..270606 | 243..1391 | 100 | -> | Plus |
2L | 270661..271626 | 1392..2357 | 100 | Plus |
Translation from 44 to 2044
> GH27858.pep MIDILSLPRRNKVSGNPALLKMISYKTGLPINSLPGWELIPLNCKLPMLK CPGNQVIFSKNKIGQDFKSGKQEFECSVTEHIPEYNPLHDSNLKTFYSNE RNLKRLRENGEITQDNDVICNLKDFNQHRQELHKSQLYYILQAYKRRESE QYDRMLIANAESITKKDHQNLAARHQCTEEVLARKKLQEQERHERKVHLL NITYEKFKRLENLATMQNMLLEHRKMLTNMRVAAHISMCQDLMRKLLIKQ KKLFQFKKDRFNKNMRILRKQRLVKNTEHQIQSWRKRLDERIANQRRIEY LLQEVEKEREAFIDRHKAHYREKWQRIQDEIKERAQKAITARQPKRKRRK KKKSTLQERKPSFCDEYQATFEGLLDSDLCYALNAAIAMEGQTALSFAPD DPIYKAAQYILDYIISGLNDDLSEDECALQVLISRIKDFVCDAKKYVHYK AYQIIGFARDHKAMEVPPSMAKQPKNHSRASHVSFSGVASTIGVGSYEIH PFVDVRPCSERRATPAGSLASLVVSQIGEQVIQDKVRLPHLNRNQIVFIE HYLVKFKRDLLVGLDKLVFAAIQCHFENRMMEVREELLLLDRNYLFEQIA RGILSYAVNPLNYQSVLKLAVSVQSCEIIWELQQTMLKPGIDPRGQNHPV SCGTEQERETLALCIP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21754-PA | 672 | GF21754-PA | 1..672 | 1..666 | 3075 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24706-PA | 667 | GG24706-PA | 1..667 | 1..666 | 3528 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11544-PA | 668 | GH11544-PA | 1..666 | 1..664 | 2446 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3345-PA | 666 | CG3345-PA | 1..666 | 1..666 | 3456 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17033-PA | 676 | GI17033-PA | 1..674 | 1..664 | 2431 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25917-PA | 227 | GL25917-PA | 8..225 | 450..664 | 912 | 78.4 | Plus |
Dper\GL15774-PA | 184 | GL15774-PA | 1..152 | 45..195 | 668 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17393-PA | 666 | GA17393-PA | 1..664 | 1..664 | 2692 | 76.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16727-PA | 640 | GM16727-PA | 1..640 | 1..666 | 3412 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23011-PA | 666 | GD23011-PA | 1..666 | 1..666 | 3496 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24645-PA | 668 | GJ24645-PA | 1..666 | 1..664 | 2524 | 73.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21096-PA | 667 | GK21096-PA | 1..666 | 1..665 | 2823 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16681-PA | 667 | GE16681-PA | 1..667 | 1..666 | 3502 | 97.8 | Plus |
Translation from 44 to 2044
> GH27858.hyp MIDILSLPRRNKVSGNPALLKMISYKTGLPINSLPGWELIPLNCKLPMLK CPGNQVIFSKNKIGQDFKSGKQEFECSVTEHIPEYNPLHDSNLKTFYSNE RNLKRLRENGEITQDNDVICNLKDFNQHRQELHKSQLYYILQAYKRRESE QYDRMLIANAESITKKDHQNLAARHQCTEEVLARKKLQEQERHERKVHLL NITYEKFKRLENLATMQNMLLEHRKMLTNMRVAAHISMCQDLMRKLLIKQ KKLFQFKKDRFNKNMRILRKQRLVKNTEHQIQSWRKRLDERIANQRRIEY LLQEVEKEREAFIDRHKAHYREKWQRIQDEIKERAQKAITARQPKRKRRK KKKSTLQERKPSFCDEYQATFEGLLDSDLCYALNAAIAMEGQTALSFAPD DPIYKAAQYILDYIISGLNDDLSEDECALQVLISRIKDFVCDAKKYVHYK AYQIIGFARDHKAMEVPPSMAKQPKNHSRASHVSFSGVASTIGVGSYEIH PFVDVRPCSERRATPAGSLASLVVSQIGEQVIQDKVRLPHLNRNQIVFIE HYLVKFKRDLLVGLDKLVFAAIQCHFENRMMEVREELLLLDRNYLFEQIA RGILSYAVNPLNYQSVLKLAVSVQSCEIIWELQQTMLKPGIDPRGQNHPV SCGTEQERETLALCIP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3345-PA | 666 | CG3345-PA | 1..666 | 1..666 | 3456 | 100 | Plus |