BDGP Sequence Production Resources |
Search the DGRC for GH28326
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 283 |
Well: | 26 |
Vector: | pOT2 |
Associated Gene/Transcript | CG32549-RE |
Protein status: | GH28326.pep: gold |
Sequenced Size: | 2491 |
Gene | Date | Evidence |
---|---|---|
CG32549-RE | 2009-06-22 | Replacement based on scoring |
2491 bp assembled on 2009-12-14
GenBank Submission: BT120037.1
> GH28326.complete ATTTTGCCATCCAAGTGGAAAATCCGAATTCGCATCCGAATAGCAATCGT AGATACGAAATCCCAAATTGTCAGTTTTTTTTTTTTTTTGTTTTTCTCAC TCGAAGAGTTTTCCAAACGATCGATCAGTCAGATTCATTCCAACTCCAGA TCTTGGTGACGTCGTCGTCCGCCAAAATAACAGCTGATAAGATACTTATC GCTGCTGGTAGCCCCCACAACCACCCCGCGCGCCTACCGACGTTCCACGC CCACTGGGCGAAAGAGCTTAATCAGCAGCAGCGACGCGGCGCAGCATTTG TGGCCTTGTAATCCGCGGCAGCTCCAAGATGCCACAGCCAAAGCAAAACC AGCAGAAACAGCCACAGCCACAACAGCAAAAGCCGCTGCAGAAACATTCC AGCACCAGCTCCACGATCATCGCCAAGCCGGAAAAGGAACGGGAACGCAC GCAGACGATCGGCGAAACCGACATGGATCAGTCGGTGCTCAATGGACTGG CAGTGGGCGCAGATGGAACCGCCGGCTACCATGGTCACAAGCGAGAACTT GGTCACAGAGTGTTTGTGAACAGATCGCTGCATTTGGAGAATATCAAGTA CTATGGCTTCGATATGGACTACACCTTGGCAGAGTACAAGTCACCGCAGT ATGAGCAGCTGGGCTTCAACCTGGTCAAGGAGCGCCTGGTCTTCATGGGC TACCCCAAGGAGATCCTGCAGTTCGAGTACGATCCCACCTTCCCAGTACG CGGCCTGTGGTTCGACACTCTCTACGGGAATCTGCTGAAAGTGGATGCCT ACGGCAACATCCTGGTCTGCGTTCATGGCTTCGAGTTCATCAAACATCAC CAGGTGTACGAGTTGTATCCCAACAAGTTCTTGAAACTGGACGAGTCGCG TGTCTATGTCCTGAATACTCTCTTCAATCTTCCTGAAACCTATCTCCTTG CCTGTCTCGTCGACTTCCTAACCAACAGCAGCGACTTTGTGCGCGTTGAG CGCGGCATCAAAGCTGGCGATTTACTTTTTACCTACAAGTCGATTTTCCA GGATGTGCGACGTGCCGTCGACTGGGTGCATTCCGATGGCGATCTGAAGC GTCGCACCACTCAGAATATGGCTCACTATGTGAAGAAGGACGAGCGTTTG CCCACGGTCCTTTCGCGAATCCGGGAGTCGGGCGCCAAACTCTTTATGCT GACCAACAGCGACTATACGTACACCAACGAGATCATGACCTACCTGTTTG ATTTCCCCCATGGCGCCACTCCGGATGAGCCGCATCGCGACTGGAAGACC TACTTCGATGTGATCGTGGTGGATGCCCGCAAGCCGCTCTTCTTCGACGA GGGCACCGTGCTGCGGCAGGTGGACACGAAGACCGGAAGCCTGAAGATCG GCACACACGTTGGACCCCTGCAGCCGGGTCAGGTTTATTCCGGTGGCTCC TGCGAGCTCTTTACCAAGTTCATCAATGCCAAAGGCAAGGACGTGCTCTA TGTGGGCGATCACATTTTTGGCGATATTCTCAAATCGAAGAAGATTCGAG GCTGGCGCACCTTCCTAATTGTGCCCGAATTGGTGAGGGAGCTGCACGTT TGGACGGATGAGTGCCAGCTGTTTGCGGAGCTACAGAACCTGGACATCAA GCTGGGCGACCTGTACAGGGATCTCGACTCGAGTGCCAAGGTCAAGCCGG ACATTTCGCAGCTGCGCACGTGCATCCGCGATGTGACACACAAGATGGAC ATGTCCTACGGTATGATGGGCTCACTCTTCCGCTCCGGCTCGCGCCAGAC CTTCTTCTCCAGCCAGGTGGTGCGATATGCCGACGTCTATGCGGCCACCC TGCTCAACCTCATTTACTACCCATTCTCGTATATGTTCCGAGCTCCGGCC ATGCTTCTGCCCCATGAGTCGACGGTGGCCCATGATCAGGCCCATCAGCC GCCTCCGCCACTGGGCCCTGTTCCTGTTCCGGCTACGGGAGCCGCATCGG TGGCTGCCTCGCCGGATGAGCCGGCTCGCATTTTGGCGGGCACCGCCGAG CACGTTAAGGACCCCAAGGACTTGCATCGCGCAAGCTCCATTGTGCACAC TCGTCCGTCGACGCCCACCGTGGTGACCCACACCCATGACGAGGACTATT CCGAGGAGGAGGAGACACCCAGTGGTGCCGAGTCTTCCACAGAGGCTGTG CGCGATGCCTCCGAAGACTAGATGATGCCACAGCCGCCCTTCTGGAATGG AATGTTTGGATCAACGAATTTTATTCTCAAACTTCCCCAATGCCCCCATT AGCCTTGCAAACCCTTACCCGAAATCCACACCGTGGTCGAAGCAATTATG AAACGTACGATTTTCCCTGGCGATTTTACCCAAGCACAGATATGTGAAAC TATATACCATAACCGATATATATATATATACATTATACATTATACATTAT AAATTAGCTGGTTCCATACATATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32549-RE | 2588 | CG32549-RE | 31..2498 | 1..2475 | 12230 | 99.6 | Plus |
CG32549.c | 2488 | CG32549.c | 110..2428 | 150..2475 | 11500 | 99.6 | Plus |
CG32549.a | 2561 | CG32549.a | 587..2501 | 554..2475 | 9480 | 99.6 | Plus |
CG32549.c | 2488 | CG32549.c | 41..109 | 1..69 | 330 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 18280196..18281166 | 2083..1113 | 4825 | 99.8 | Minus |
chrX | 22417052 | chrX | 18293186..18293743 | 558..1 | 2760 | 99.6 | Minus |
chrX | 22417052 | chrX | 18279765..18280130 | 2449..2084 | 1815 | 99.7 | Minus |
chrX | 22417052 | chrX | 18281747..18281963 | 846..630 | 1085 | 100 | Minus |
chrX | 22417052 | chrX | 18281533..18281679 | 993..847 | 735 | 100 | Minus |
chrX | 22417052 | chrX | 18281238..18281359 | 1114..993 | 610 | 100 | Minus |
chrX | 22417052 | chrX | 18282035..18282112 | 632..555 | 390 | 100 | Minus |
chrX | 22417052 | chrX | 18279748..18279787 | 2473..2434 | 200 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 18390998..18391968 | 2083..1113 | 4855 | 100 | Minus |
X | 23542271 | X | 18403985..18404542 | 558..1 | 2775 | 99.8 | Minus |
X | 23542271 | X | 18390548..18390932 | 2475..2084 | 1820 | 98.2 | Minus |
X | 23542271 | X | 18392549..18392765 | 846..630 | 1085 | 100 | Minus |
X | 23542271 | X | 18392335..18392481 | 993..847 | 735 | 100 | Minus |
X | 23542271 | X | 18392040..18392161 | 1114..993 | 610 | 100 | Minus |
X | 23542271 | X | 18392837..18392914 | 632..555 | 390 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 18399096..18400066 | 2083..1113 | 4855 | 100 | Minus |
X | 23527363 | X | 18412083..18412640 | 558..1 | 2775 | 99.8 | Minus |
X | 23527363 | X | 18398646..18399030 | 2475..2084 | 1830 | 98.2 | Minus |
X | 23527363 | X | 18400647..18400863 | 846..630 | 1085 | 100 | Minus |
X | 23527363 | X | 18400433..18400579 | 993..847 | 735 | 100 | Minus |
X | 23527363 | X | 18400138..18400259 | 1114..993 | 610 | 100 | Minus |
X | 23527363 | X | 18400935..18401012 | 632..555 | 390 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 18279748..18280130 | 2084..2473 | 98 | <- | Minus |
chrX | 18280196..18281164 | 1115..2083 | 99 | <- | Minus |
chrX | 18281238..18281358 | 994..1114 | 100 | <- | Minus |
chrX | 18281533..18281679 | 847..993 | 100 | <- | Minus |
chrX | 18281747..18281960 | 633..846 | 100 | <- | Minus |
chrX | 18282035..18282108 | 559..632 | 100 | <- | Minus |
chrX | 18293186..18293743 | 1..558 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32549-RE | 1..1893 | 329..2221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32549-RE | 1..1893 | 329..2221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32549-RE | 1..1893 | 329..2221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32549-RE | 1..1893 | 329..2221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32549-RE | 21..2486 | 1..2473 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32549-RE | 21..2486 | 1..2473 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32549-RE | 44..2509 | 1..2473 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32549-RE | 44..2509 | 1..2473 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18392549..18392762 | 633..846 | 100 | <- | Minus |
X | 18392837..18392910 | 559..632 | 100 | <- | Minus |
X | 18390550..18390932 | 2084..2473 | 98 | <- | Minus |
X | 18390998..18391966 | 1115..2083 | 100 | <- | Minus |
X | 18392040..18392160 | 994..1114 | 100 | <- | Minus |
X | 18392335..18392481 | 847..993 | 100 | <- | Minus |
X | 18403985..18404542 | 1..558 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18392549..18392762 | 633..846 | 100 | <- | Minus |
X | 18392837..18392910 | 559..632 | 100 | <- | Minus |
X | 18390550..18390932 | 2084..2473 | 98 | <- | Minus |
X | 18390998..18391966 | 1115..2083 | 100 | <- | Minus |
X | 18392040..18392160 | 994..1114 | 100 | <- | Minus |
X | 18392335..18392481 | 847..993 | 100 | <- | Minus |
X | 18403985..18404542 | 1..558 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18392549..18392762 | 633..846 | 100 | <- | Minus |
X | 18392837..18392910 | 559..632 | 100 | <- | Minus |
X | 18390550..18390932 | 2084..2473 | 98 | <- | Minus |
X | 18390998..18391966 | 1115..2083 | 100 | <- | Minus |
X | 18392040..18392160 | 994..1114 | 100 | <- | Minus |
X | 18392335..18392481 | 847..993 | 100 | <- | Minus |
X | 18403985..18404542 | 1..558 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 18284583..18284965 | 2084..2473 | 98 | <- | Minus |
arm_X | 18285031..18285999 | 1115..2083 | 100 | <- | Minus |
arm_X | 18286073..18286193 | 994..1114 | 100 | <- | Minus |
arm_X | 18286368..18286514 | 847..993 | 100 | <- | Minus |
arm_X | 18286582..18286795 | 633..846 | 100 | <- | Minus |
arm_X | 18286870..18286943 | 559..632 | 100 | <- | Minus |
arm_X | 18298018..18298575 | 1..558 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18398648..18399030 | 2084..2473 | 98 | <- | Minus |
X | 18399096..18400064 | 1115..2083 | 100 | <- | Minus |
X | 18400138..18400258 | 994..1114 | 100 | <- | Minus |
X | 18400433..18400579 | 847..993 | 100 | <- | Minus |
X | 18400647..18400860 | 633..846 | 100 | <- | Minus |
X | 18400935..18401008 | 559..632 | 100 | <- | Minus |
X | 18412083..18412640 | 1..558 | 99 | Minus |
Translation from 328 to 2220
> GH28326.pep MPQPKQNQQKQPQPQQQKPLQKHSSTSSTIIAKPEKERERTQTIGETDMD QSVLNGLAVGADGTAGYHGHKRELGHRVFVNRSLHLENIKYYGFDMDYTL AEYKSPQYEQLGFNLVKERLVFMGYPKEILQFEYDPTFPVRGLWFDTLYG NLLKVDAYGNILVCVHGFEFIKHHQVYELYPNKFLKLDESRVYVLNTLFN LPETYLLACLVDFLTNSSDFVRVERGIKAGDLLFTYKSIFQDVRRAVDWV HSDGDLKRRTTQNMAHYVKKDERLPTVLSRIRESGAKLFMLTNSDYTYTN EIMTYLFDFPHGATPDEPHRDWKTYFDVIVVDARKPLFFDEGTVLRQVDT KTGSLKIGTHVGPLQPGQVYSGGSCELFTKFINAKGKDVLYVGDHIFGDI LKSKKIRGWRTFLIVPELVRELHVWTDECQLFAELQNLDIKLGDLYRDLD SSAKVKPDISQLRTCIRDVTHKMDMSYGMMGSLFRSGSRQTFFSSQVVRY ADVYAATLLNLIYYPFSYMFRAPAMLLPHESTVAHDQAHQPPPPLGPVPV PATGAASVAASPDEPARILAGTAEHVKDPKDLHRASSIVHTRPSTPTVVT HTHDEDYSEEEETPSGAESSTEAVRDASED*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22508-PA | 378 | GF22508-PA | 23..364 | 72..416 | 1758 | 94.8 | Plus |
Dana\GF21341-PA | 558 | GF21341-PA | 110..552 | 78..530 | 490 | 29.2 | Plus |
Dana\GF10066-PA | 536 | GF10066-PA | 105..454 | 81..421 | 223 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18126-PA | 713 | GG18126-PA | 156..713 | 72..630 | 2923 | 97.5 | Plus |
Dere\GG24086-PA | 547 | GG24086-PA | 99..541 | 78..530 | 493 | 29.4 | Plus |
Dere\GG14610-PA | 534 | GG14610-PA | 104..452 | 81..421 | 223 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12351-PA | 611 | GH12351-PA | 25..611 | 38..629 | 2789 | 89.6 | Plus |
Dgri\GH19932-PA | 539 | GH19932-PA | 91..533 | 78..530 | 493 | 30.3 | Plus |
Dgri\GH16005-PA | 445 | GH16005-PA | 17..354 | 93..418 | 213 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32549-PE | 630 | CG32549-PE | 1..630 | 1..630 | 3331 | 100 | Plus |
CG32549-PH | 709 | CG32549-PH | 151..709 | 72..630 | 2941 | 99.5 | Plus |
CG32549-PG | 709 | CG32549-PG | 151..709 | 72..630 | 2941 | 99.5 | Plus |
CG32549-PF | 612 | CG32549-PF | 54..612 | 72..630 | 2941 | 99.5 | Plus |
CG32549-PB | 612 | CG32549-PB | 54..612 | 72..630 | 2941 | 99.5 | Plus |
CG32549-PD | 581 | CG32549-PD | 23..581 | 72..630 | 2941 | 99.5 | Plus |
CG1814-PC | 462 | CG1814-PC | 14..456 | 78..530 | 491 | 29.8 | Plus |
CG1814-PA | 548 | CG1814-PA | 100..542 | 78..530 | 491 | 29.8 | Plus |
CG1814-PB | 409 | CG1814-PB | 8..403 | 125..530 | 410 | 27.7 | Plus |
CG2277-PB | 534 | CG2277-PB | 31..452 | 5..421 | 237 | 24.5 | Plus |
CG2277-PA | 534 | CG2277-PA | 31..452 | 5..421 | 237 | 24.5 | Plus |
CG2277-PC | 435 | CG2277-PC | 5..353 | 81..421 | 230 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15598-PA | 639 | GI15598-PA | 37..616 | 36..607 | 2727 | 89.5 | Plus |
Dmoj\GI19889-PA | 537 | GI19889-PA | 89..531 | 78..530 | 484 | 29.4 | Plus |
Dmoj\GI12272-PA | 444 | GI12272-PA | 6..355 | 82..418 | 238 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27036-PA | 510 | GL27036-PA | 44..497 | 162..621 | 2085 | 85.7 | Plus |
Dper\GL17171-PA | 499 | GL17171-PA | 51..493 | 78..530 | 478 | 30.2 | Plus |
Dper\GL27036-PA | 510 | GL27036-PA | 2..67 | 12..94 | 197 | 57.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22323-PA | 576 | GA22323-PA | 21..563 | 72..621 | 2685 | 90.8 | Plus |
Dpse\GA25020-PB | 551 | GA25020-PB | 103..545 | 78..530 | 487 | 30.2 | Plus |
Dpse\GA25020-PC | 409 | GA25020-PC | 8..403 | 125..530 | 399 | 28.2 | Plus |
Dpse\GA15339-PA | 445 | GA15339-PA | 6..357 | 82..421 | 249 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22819-PA | 637 | GM22819-PA | 11..637 | 3..630 | 3316 | 98.4 | Plus |
Dsec\GM21134-PA | 481 | GM21134-PA | 100..433 | 78..422 | 424 | 31.5 | Plus |
Dsec\GM14224-PA | 532 | GM14224-PA | 31..450 | 7..421 | 228 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15638-PA | 403 | GD15638-PA | 5..403 | 78..476 | 2140 | 99 | Plus |
Dsim\GD10664-PA | 548 | GD10664-PA | 100..542 | 78..530 | 493 | 29.6 | Plus |
Dsim\GD15640-PA | 188 | GD15640-PA | 1..79 | 1..79 | 400 | 96.2 | Plus |
Dsim\GD13486-PA | 534 | GD13486-PA | 104..452 | 81..421 | 235 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15201-PA | 634 | GJ15201-PA | 46..634 | 72..629 | 2640 | 85.6 | Plus |
Dvir\GJ15059-PA | 538 | GJ15059-PA | 90..532 | 78..530 | 485 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25265-PA | 607 | GK25265-PA | 31..607 | 46..629 | 2683 | 87.3 | Plus |
Dwil\GK21823-PA | 537 | GK21823-PA | 87..531 | 76..530 | 486 | 29.6 | Plus |
Dwil\GK20501-PA | 430 | GK20501-PA | 6..353 | 82..419 | 172 | 22.5 | Plus |
Translation from 328 to 2220
> GH28326.hyp MPQPKQNQQKQPQPQQQKPLQKHSSTSSTIIAKPEKERERTQTIGETDMD QSVLNGLAVGADGTAGYHGHKRELGHRVFVNRSLHLENIKYYGFDMDYTL AEYKSPQYEQLGFNLVKERLVFMGYPKEILQFEYDPTFPVRGLWFDTLYG NLLKVDAYGNILVCVHGFEFIKHHQVYELYPNKFLKLDESRVYVLNTLFN LPETYLLACLVDFLTNSSDFVRVERGIKAGDLLFTYKSIFQDVRRAVDWV HSDGDLKRRTTQNMAHYVKKDERLPTVLSRIRESGAKLFMLTNSDYTYTN EIMTYLFDFPHGATPDEPHRDWKTYFDVIVVDARKPLFFDEGTVLRQVDT KTGSLKIGTHVGPLQPGQVYSGGSCELFTKFINAKGKDVLYVGDHIFGDI LKSKKIRGWRTFLIVPELVRELHVWTDECQLFAELQNLDIKLGDLYRDLD SSAKVKPDISQLRTCIRDVTHKMDMSYGMMGSLFRSGSRQTFFSSQVVRY ADVYAATLLNLIYYPFSYMFRAPAMLLPHESTVAHDQAHQPPPPLGPVPV PATGAASVAASPDEPARILAGTAEHVKDPKDLHRASSIVHTRPSTPTVVT HTHDEDYSEEEETPSGAESSTEAVRDASED*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32549-PE | 630 | CG32549-PE | 1..630 | 1..630 | 3331 | 100 | Plus |
CG32549-PH | 709 | CG32549-PH | 151..709 | 72..630 | 2941 | 99.5 | Plus |
CG32549-PG | 709 | CG32549-PG | 151..709 | 72..630 | 2941 | 99.5 | Plus |
CG32549-PF | 612 | CG32549-PF | 54..612 | 72..630 | 2941 | 99.5 | Plus |
CG32549-PB | 612 | CG32549-PB | 54..612 | 72..630 | 2941 | 99.5 | Plus |