BDGP Sequence Production Resources |
Search the DGRC for GH28366
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 283 |
Well: | 66 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8248-RA |
Protein status: | GH28366.pep: validated full length |
Preliminary Size: | 1184 |
Sequenced Size: | 1047 |
Gene | Date | Evidence |
---|---|---|
CG8248 | 2001-01-01 | Release 2 assignment |
CG8248 | 2001-10-10 | Blastp of sequenced clone |
CG8248 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8248 | 2008-04-29 | Release 5.5 accounting |
CG8248 | 2008-08-15 | Release 5.9 accounting |
CG8248 | 2008-12-18 | 5.12 accounting |
1047 bp (1047 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060814
> GH28366.complete CAAACACCGAAAAGCAAGTGCCGTGAGTAGGGACACGGATACAAATAACC ATCATGTGGTGCCGCTGGGGATCCTCGTGGTGCTCTGCACTGTGTATCTC ATGGTAGCCGGGATGCAGCGCAACTACAGGCACTATTTTAAGCCGGGCGT GGCTGCCTTCGACCTGCACCATGCCCAGCCGGAAGCCATGGCCGACGCCG AATTGGATGTCGCCGCTCCAGATGCATCGTGCCAGAGGTTGGACGTTTTC GGAAAGGAATCCAATCGGAATCAGGCAGTTTCAAGAAGATCCCAAGGCAG GCCCACGAAGAGAACCAAAAACGGCACTGGAAATGGGGTCAGCAAGCAAC CTCGTCGTTTGATAAAGTCCCCGGAGGGGCACAAGAAGAAGGAAGTTGGC AAGAAGAGTAACACAGCGGAGCCCATTATTTACCTGTTCGCCCTTGTGTT TGTCTATCTGCTTCTGAAGGCCGCCTCGGACATCAACCAGCACTACAAGT CGCAGAACAAAGGGGACAAGCGACTGCGCCGGTGCTCGCTGCAATCTTAT GCCCAGATCCACAAGCAGGATCGCCGGTCATCAAAAGGTATTTCACCAAA ATCTTTGCCAAAGTTTTAGCTCGCTGGGGGCCAGGTGCCTAGCCTATTAC ACCGTGTTAACGAGGGATCAAGTGAATTGTTATCCTATAAATCTAAATGT ATCTACCACTATGTACTGAACTAGCCAATCTTCTCTACTCTAAAGCACCA GTTTTCTGACTTTTTCGGAAAATGTATTGTTGTGTATTGTGTATCTCTCG TCTGTCCTCAATCTCTATACATCTATACATCTGTACATCGCACTTTTCGG GCTCGATTATGCGTTTGATATCTGTGTTTTTGAACGACCTCCACTGTTTA CCTCCTCTTCACCTATCTGTGAAACTGTACTGAATCCGAATATAAGGTTG TACATACTCGAATGTATATTACTGTCCTAAGTGTACGTAATCCTAAAATA AATCAATTACTATGTGCTTTCCTGTGATCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8248-RA | 1473 | CG8248-RA | 443..1473 | 1..1031 | 5155 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4806491..4807017 | 503..1029 | 100 | <- | Minus |
chr2R | 4807075..4807576 | 1..502 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8248-RA | 66..684 | 1..619 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8248-RA | 66..684 | 1..619 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8248-RA | 66..684 | 1..619 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8248-RA | 66..684 | 1..619 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8248-RA | 66..684 | 1..619 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8248-RA | 342..1370 | 1..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8248-RA | 342..1370 | 1..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8248-RA | 344..1372 | 1..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8248-RA | 342..1370 | 1..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8248-RA | 344..1372 | 1..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8918940..8919466 | 503..1029 | 100 | <- | Minus |
2R | 8919524..8920025 | 1..502 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8918940..8919466 | 503..1029 | 100 | <- | Minus |
2R | 8919524..8920025 | 1..502 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8918940..8919466 | 503..1029 | 100 | <- | Minus |
2R | 8919524..8920025 | 1..502 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4807029..4807530 | 1..502 | 100 | Minus | |
arm_2R | 4806445..4806971 | 503..1029 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8920723..8921224 | 1..502 | 100 | Minus | |
2R | 8920139..8920665 | 503..1029 | 100 | <- | Minus |
Translation from 0 to 618
> GH28366.hyp KHRKASAVSRDTDTNNHHVVPLGILVVLCTVYLMVAGMQRNYRHYFKPGV AAFDLHHAQPEAMADAELDVAAPDASCQRLDVFGKESNRNQAVSRRSQGR PTKRTKNGTGNGVSKQPRRLIKSPEGHKKKEVGKKSNTAEPIIYLFALVF VYLLLKAASDINQHYKSQNKGDKRLRRCSLQSYAQIHKQDRRSSKGISPK SLPKF*
Translation from 100 to 618
> GH28366.pep MVAGMQRNYRHYFKPGVAAFDLHHAQPEAMADAELDVAAPDASCQRLDVF GKESNRNQAVSRRSQGRPTKRTKNGTGNGVSKQPRRLIKSPEGHKKKEVG KKSNTAEPIIYLFALVFVYLLLKAASDINQHYKSQNKGDKRLRRCSLQSY AQIHKQDRRSSKGISPKSLPKF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12991-PA | 349 | GF12991-PA | 49..211 | 1..162 | 509 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10608-PA | 232 | GG10608-PA | 55..232 | 1..172 | 780 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22685-PA | 335 | GH22685-PA | 43..200 | 1..162 | 339 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8248-PA | 227 | CG8248-PA | 56..227 | 1..172 | 891 | 100 | Plus |
CG8248-PB | 226 | CG8248-PB | 56..226 | 1..172 | 874 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20613-PA | 174 | GI20613-PA | 1..174 | 1..172 | 390 | 52.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10406-PA | 225 | GL10406-PA | 45..225 | 1..172 | 531 | 60.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20928-PB | 355 | GA20928-PB | 45..219 | 1..162 | 475 | 57.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20653-PA | 226 | GM20653-PA | 56..226 | 1..172 | 821 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10127-PA | 226 | GD10127-PA | 56..226 | 1..172 | 851 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21053-PA | 178 | GJ21053-PA | 1..178 | 1..172 | 374 | 48.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10753-PA | 322 | GK10753-PA | 46..197 | 3..162 | 347 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22711-PA | 231 | GE22711-PA | 55..231 | 1..172 | 713 | 80 | Plus |