BDGP Sequence Production Resources |
Search the DGRC for GH28416
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 284 |
Well: | 16 |
Vector: | pOT2 |
Associated Gene/Transcript | Pglym87-RA |
Protein status: | GH28416.pep: gold |
Preliminary Size: | 1216 |
Sequenced Size: | 1140 |
Gene | Date | Evidence |
---|---|---|
CG17645 | 2001-01-01 | Release 2 assignment |
CG17645 | 2002-06-12 | Blastp of sequenced clone |
CG17645 | 2003-01-01 | Sim4 clustering to Release 3 |
Pglym87 | 2008-04-29 | Release 5.5 accounting |
Pglym87 | 2008-08-15 | Release 5.9 accounting |
Pglym87 | 2008-12-18 | 5.12 accounting |
1140 bp (1140 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122135
> GH28416.complete AAATGAACACGATATAGACTGCAAACACTTTCCAAATTCAAAGTGTCCCA AAATGTTGGCTCTGGCCAGGAATTCGTGGTGTGGCCAATTGCTGTGTCGC GTGGCGAACATCGAAGCCCGCTGCCCGTTCTCGAAGTCATCATCCGGCGG AAAGCAGGCCGAGAAGAAGGGCAAGTACAGGATTGTGATGGTTCGTCATG GAGAGTCCGAATGGAATCAGAAGAACCTATTCTGCGGATGGTTCGATGCC AAGCTATCGGAGAAGGGGCAGCAGGAGGCCTGTGCCGCTGGCAAAGCGCT CAAAGATGCCAAAATTGAGTTCGATGTGGCCCACACCTCGGTGCTGACCA GAGCCCAGGAGACACTCAGGGCCGCCCTAAAGTCCAGCGAGCACAAGAAG ATTCCGGTGTGCACCACGTGGCGCCTCAACGAGCGCCACTACGGCGGACT GACGGGACTGAATAAGGCCGAGACCGCCAAGAAGTTCGGCGAGGAGAAGG TTAAGATCTGGCGCCGCAGCTTTGACACCCCACCGCCGCCAATGGAGAAG GATCACGAGTACTACGCCTGCATTGTTGAGGATCCGCGCTACAAGGACCA ACTGAAGCCGGAGGAGTTCCCCAAATCCGAGTCCCTCAAGCTCACCATCG AGCGCACCTTGCCCTACTGGAACGAGGTCATAGTGCCCCAGATCAAGGAT GGAATGCGTGTCCTGATCGCCGCCCACGGCAACAGCCTGCGGGGCGTGGT CAAGCACTTGGAATGCATCTCTGACAAGGACATTATGAGCCTCAACCTGC CCACTGGCATTCCTTTCGTCTACGAACTAGACGAGAGCCTCAAGCCTTTG GCCACGTTGAAGTTCCTCGGCGATCCGGAGACGGTGAAGAAGGCAATGGA GTCGGTGGCCAACCAGGGCAAAGCCAAGTGATCCGTGATTTTGGGTATAC CCAGCAGCCTCCGAAGAAGGTCAGAGCAATCAGCTCAATGCACTTGTATG CCAAACAAAAGCGGCGAATCGAAAGTGGTGCTCACTGTGGCCAGGCGAAT GTCAAGAAGCAAATAAATTTATTTGATTTTAATTGAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pglym87-RA | 1427 | Pglym87-RA | 25..1110 | 1..1086 | 5430 | 100 | Plus |
Pglym78-RB | 1487 | Pglym78-RB | 641..965 | 605..929 | 665 | 80.3 | Plus |
Pglym78-RC | 1487 | Pglym78-RC | 641..965 | 605..929 | 665 | 80.3 | Plus |
Pglym78-RB | 1487 | Pglym78-RB | 206..399 | 170..363 | 400 | 80.4 | Plus |
Pglym78-RC | 1487 | Pglym78-RC | 206..399 | 170..363 | 400 | 80.4 | Plus |
Pglym78-RB | 1487 | Pglym78-RB | 455..583 | 419..547 | 330 | 83.7 | Plus |
Pglym78-RC | 1487 | Pglym78-RC | 455..583 | 419..547 | 330 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 8057039..8058123 | 1085..1 | 5425 | 100 | Minus |
chr3R | 27901430 | chr3R | 24971885..24972372 | 269..756 | 805 | 77.7 | Plus |
chr3R | 27901430 | chr3R | 24972465..24972604 | 790..929 | 265 | 79.3 | Plus |
chr3R | 27901430 | chr3R | 24971315..24971397 | 170..252 | 220 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 12231644..12232729 | 1086..1 | 5430 | 100 | Minus |
3R | 32079331 | 3R | 29149011..29149498 | 269..756 | 790 | 77.5 | Plus |
3R | 32079331 | 3R | 29149594..29149733 | 790..929 | 295 | 80.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 11972475..11973560 | 1086..1 | 5430 | 100 | Minus |
3R | 31820162 | 3R | 28890178..28890329 | 605..756 | 415 | 84.8 | Plus |
3R | 31820162 | 3R | 28889992..28890120 | 419..547 | 330 | 83.7 | Plus |
3R | 31820162 | 3R | 28890425..28890564 | 790..929 | 295 | 80.7 | Plus |
3R | 31820162 | 3R | 28889842..28889936 | 269..363 | 220 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
opus | 7521 | opus OPUS 7521bp | 3988..4019 | 960..991 | 115 | 84.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 8057039..8058123 | 1..1085 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym87-RA | 1..879 | 53..931 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym87-RA | 1..879 | 53..931 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym87-RA | 1..879 | 53..931 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym87-RA | 1..879 | 53..931 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym87-RA | 1..879 | 53..931 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym87-RA | 25..1109 | 1..1085 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym87-RA | 25..1109 | 1..1085 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym87-RA | 1..1085 | 1..1085 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym87-RA | 25..1109 | 1..1085 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym87-RA | 1..1085 | 1..1085 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12231645..12232729 | 1..1085 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12231645..12232729 | 1..1085 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12231645..12232729 | 1..1085 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 8057367..8058451 | 1..1085 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11972476..11973560 | 1..1085 | 100 | Minus |
Translation from 0 to 930
> GH28416.hyp NEHDIDCKHFPNSKCPKMLALARNSWCGQLLCRVANIEARCPFSKSSSGG KQAEKKGKYRIVMVRHGESEWNQKNLFCGWFDAKLSEKGQQEACAAGKAL KDAKIEFDVAHTSVLTRAQETLRAALKSSEHKKIPVCTTWRLNERHYGGL TGLNKAETAKKFGEEKVKIWRRSFDTPPPPMEKDHEYYACIVEDPRYKDQ LKPEEFPKSESLKLTIERTLPYWNEVIVPQIKDGMRVLIAAHGNSLRGVV KHLECISDKDIMSLNLPTGIPFVYELDESLKPLATLKFLGDPETVKKAME SVANQGKAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pglym87-PA | 292 | CG17645-PA | 1..292 | 18..309 | 1544 | 100 | Plus |
Pglym78-PC | 255 | CG1721-PC | 3..255 | 57..309 | 1042 | 75.9 | Plus |
Pglym78-PB | 255 | CG1721-PB | 3..255 | 57..309 | 1042 | 75.9 | Plus |
Pglym78-PA | 255 | CG1721-PA | 3..255 | 57..309 | 1042 | 75.9 | Plus |
CG7059-PC | 253 | CG7059-PC | 6..252 | 60..306 | 486 | 41 | Plus |
Translation from 52 to 930
> GH28416.pep MLALARNSWCGQLLCRVANIEARCPFSKSSSGGKQAEKKGKYRIVMVRHG ESEWNQKNLFCGWFDAKLSEKGQQEACAAGKALKDAKIEFDVAHTSVLTR AQETLRAALKSSEHKKIPVCTTWRLNERHYGGLTGLNKAETAKKFGEEKV KIWRRSFDTPPPPMEKDHEYYACIVEDPRYKDQLKPEEFPKSESLKLTIE RTLPYWNEVIVPQIKDGMRVLIAAHGNSLRGVVKHLECISDKDIMSLNLP TGIPFVYELDESLKPLATLKFLGDPETVKKAMESVANQGKAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17736-PA | 288 | GF17736-PA | 1..288 | 1..292 | 1169 | 75.3 | Plus |
Dana\GF23292-PA | 255 | GF23292-PA | 3..255 | 40..292 | 1012 | 75.5 | Plus |
Dana\GF18444-PA | 265 | GF18444-PA | 18..265 | 43..290 | 513 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17149-PA | 292 | GG17149-PA | 1..292 | 1..292 | 1529 | 96.9 | Plus |
Dere\GG11648-PA | 255 | GG11648-PA | 3..255 | 40..292 | 1021 | 76.3 | Plus |
Dere\GG11129-PA | 267 | GG11129-PA | 20..266 | 43..289 | 519 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15422-PA | 247 | GH15422-PA | 1..247 | 46..292 | 1022 | 72.9 | Plus |
Dgri\GH23221-PA | 255 | GH23221-PA | 3..255 | 40..292 | 1001 | 74.3 | Plus |
Dgri\GH14297-PA | 255 | GH14297-PA | 3..255 | 40..292 | 1001 | 74.3 | Plus |
Dgri\GH13344-PA | 265 | GH13344-PA | 18..264 | 43..289 | 537 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pglym87-PA | 292 | CG17645-PA | 1..292 | 1..292 | 1544 | 100 | Plus |
Pglym78-PC | 255 | CG1721-PC | 3..255 | 40..292 | 1042 | 75.9 | Plus |
Pglym78-PB | 255 | CG1721-PB | 3..255 | 40..292 | 1042 | 75.9 | Plus |
Pglym78-PA | 255 | CG1721-PA | 3..255 | 40..292 | 1042 | 75.9 | Plus |
CG7059-PC | 253 | CG7059-PC | 6..252 | 43..289 | 486 | 41 | Plus |
CG7059-PD | 262 | CG7059-PD | 15..261 | 43..289 | 486 | 41 | Plus |
CG7059-PA | 267 | CG7059-PA | 20..266 | 43..289 | 486 | 41 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10280-PA | 293 | GI10280-PA | 42..293 | 41..292 | 1062 | 74.6 | Plus |
Dmoj\GI23192-PA | 255 | GI23192-PA | 3..255 | 40..292 | 1003 | 74.3 | Plus |
Dmoj\GI22381-PA | 268 | GI22381-PA | 21..267 | 43..289 | 541 | 41.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21564-PA | 309 | GL21564-PA | 52..309 | 35..292 | 1172 | 84.1 | Plus |
Dper\GL23914-PA | 255 | GL23914-PA | 3..255 | 40..292 | 1064 | 75.5 | Plus |
Dper\GL24208-PA | 267 | GL24208-PA | 20..266 | 43..289 | 531 | 42.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14593-PA | 290 | GA14593-PA | 33..290 | 35..292 | 1173 | 84.1 | Plus |
Dpse\GA14392-PA | 255 | GA14392-PA | 3..255 | 40..292 | 1064 | 75.5 | Plus |
Dpse\GA20068-PA | 267 | GA20068-PA | 20..266 | 43..289 | 531 | 42.6 | Plus |
Dpse\GA20068-PB | 252 | GA20068-PB | 5..251 | 43..289 | 530 | 42.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26030-PA | 292 | GM26030-PA | 1..292 | 1..292 | 1560 | 99.3 | Plus |
Dsec\GM12771-PA | 255 | GM12771-PA | 3..255 | 40..292 | 1011 | 75.5 | Plus |
Dsec\GM26427-PA | 267 | GM26427-PA | 20..266 | 43..289 | 506 | 41.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20588-PA | 341 | GD20588-PA | 1..292 | 1..292 | 1534 | 97.3 | Plus |
Dsim\GD20944-PA | 267 | GD20944-PA | 20..266 | 43..289 | 504 | 41.4 | Plus |
Dsim\GD21420-PA | 429 | GD21420-PA | 3..110 | 40..147 | 476 | 79.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11087-PA | 299 | GJ11087-PA | 48..299 | 41..292 | 1069 | 77 | Plus |
Dvir\GJ14508-PA | 255 | GJ14508-PA | 3..255 | 40..292 | 1008 | 75.1 | Plus |
Dvir\GJ24414-PA | 265 | GJ24414-PA | 18..264 | 43..289 | 514 | 41 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11893-PA | 255 | GK11893-PA | 3..255 | 40..292 | 1068 | 75.5 | Plus |
Dwil\GK11561-PA | 287 | GK11561-PA | 20..287 | 26..292 | 1045 | 71.3 | Plus |
Dwil\GK14265-PA | 267 | GK14265-PA | 20..267 | 43..290 | 575 | 44.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24538-PA | 292 | GE24538-PA | 1..292 | 1..292 | 1521 | 96.6 | Plus |
Dyak\Pglym78-PA | 255 | GE23839-PA | 3..255 | 40..292 | 1015 | 75.9 | Plus |
Dyak\GE10295-PA | 253 | GE10295-PA | 6..252 | 43..289 | 502 | 41.8 | Plus |