BDGP Sequence Production Resources |
Search the DGRC for GH28534
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 285 |
Well: | 34 |
Vector: | pOT2 |
Associated Gene/Transcript | Tina-1-RB |
Protein status: | GH28534.pep: gold |
Preliminary Size: | 1583 |
Sequenced Size: | 1437 |
Gene | Date | Evidence |
---|---|---|
CG2803 | 2001-01-01 | Release 2 assignment |
CG2803 | 2001-07-04 | Blastp of sequenced clone |
CG2803 | 2003-01-01 | Sim4 clustering to Release 3 |
Tina-1 | 2008-04-29 | Release 5.5 accounting |
Tina-1 | 2008-08-15 | Release 5.9 accounting |
Tina-1 | 2008-12-18 | 5.12 accounting |
1437 bp (1437 high quality bases) assembled on 2001-07-04
GenBank Submission: AY060353
> GH28534.complete GGAACTAAATTTAAGGCATTTTAAGTTATCCGATCCATCGGAGGGTTATC AGATAGTTTATTGGAATTTTTAAGATATCTACATATGTATGAGTGTGAGC TGATGCCTGTTCTGGGTTATGTAAGCGGATTCGCCAAGATGCTTTGATGC AACCGTTTGATGACATTGATTTAAGGCCGCTTGCGTGTGTTATCCATTTA CTGCAATGATTAAACCGATTTAAGCAATTATTAATGTGCCAATTACATGT GTACAGATAGCGAGTGTCTCCATACATATGTACCTGTGGAGGCGTAACTG CTGCGCAGTTTGTGAGGCACGCACTCAGCCCCAAAAATACGAAACAGCTA CGTACATATATTAGCAACAATAACAGACTTTAAGAATAAACGTGTGAATG CACGAAACCGGTTGAGCCATCCCATTCTCGCCCAAAAAGCGGTTCAGCTG AGAATCTCGCCAAACACCGAGACGTTTCGTGAACCTTATCAATAACTTGC GGGGGCTAGCCAGTGGAAAGTGTTCGGATCCCTGATCCCTGATAAGCCAC GGCGATCGATTGATACCAGTAGAGCAAACTCTCACAAGATACCACCAGTT TATCAGATCTCTAACCTAACCCTACTTATCTGTCTTTACGCCACACCCAC CTCTCACGCACTCCACAGAAAGTCTCCTCCGCCTTGAGCAAGCTCTTCGT GTACGGCGCCCTCAAGTACGGACAGCCCAGCAACTCAATCCTGGCCAGCT CTGGCAACGGCTTCGCTAAGTTCTGGTGCAAGGCGACCACCACCCAAAAG CTGCCGCTAGTGATCGCCACCCGCTACAACATTCCCTTCCTGCTGAACAA GCCCGGAGTGGGATATTACGTAACAGGGGAGATCTACGAGGTGGACGATC GAATGCTGAATTCCCTGGACAACCTGGAGGATTGCGAGGAGATCTACACT CGCGAGATGCACGATATGAACATTGGCGTTGGAGAAGGAACCGTTCCATG CTGGGTGTACCTGCTGCAGAAGTACCCGGAGAACCTACTTAGTCTGCGCT ACTTGTCCAGCTACGAGAACTCAACCACCCATCCATACATTATGCGCCAT CGCCGCACCCACAAGCATCCGGCCCAGGACGACCTCACCTACGAGGCCCA GAACTAATAACGTGGGTTGTGGTGTCGCCCGTTTGTTTGGATGTTCTCTG GATAGCCTGGCCACTAATCTTATGTTACCGTAGTTGCATTTTAAGACCGT ACTTGCAGACGCAGATGTACTGATCGATATATACCCGTATATATGGGCAA ACGATATAAACTGATACATATGTACCATACGCATTATTTAGGTTTTAGCA AACGTAGTCTGTAATTTGATAGTTTTCGACAAACAAAGCAAATAAACTGA AGCAATTTAAAATAAAATAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20826579..20827008 | 989..1418 | 99 | <- | Minus |
chr2R | 20827076..20828063 | 1..988 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tina-1-RA | 7..504 | 659..1157 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tina-1-RA | 7..504 | 659..1157 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tina-1-RA | 7..504 | 659..1157 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tina-1-RA | 7..504 | 659..1157 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tina-1-RA | 7..504 | 659..1157 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tina-1-RB | 1..1418 | 1..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tina-1-RB | 1..1418 | 1..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tina-1-RB | 12..1429 | 1..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tina-1-RB | 1..1418 | 1..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tina-1-RB | 12..1429 | 1..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24940625..24941054 | 989..1418 | 100 | <- | Minus |
2R | 24941122..24942109 | 1..988 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24940625..24941054 | 989..1418 | 100 | <- | Minus |
2R | 24941122..24942109 | 1..988 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24940625..24941054 | 989..1418 | 100 | <- | Minus |
2R | 24941122..24942109 | 1..988 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20828148..20828577 | 989..1418 | 100 | <- | Minus |
arm_2R | 20828645..20829632 | 1..988 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24941842..24942271 | 989..1418 | 100 | <- | Minus |
2R | 24942339..24943326 | 1..988 | 100 | Minus |
Translation from 902 to 1156
> GH28534.hyp MLNSLDNLEDCEEIYTREMHDMNIGVGEGTVPCWVYLLQKYPENLLSLRY LSSYENSTTHPYIMRHRRTHKHPAQDDLTYEAQN*
Translation from 902 to 1156
> GH28534.pep MLNSLDNLEDCEEIYTREMHDMNIGVGEGTVPCWVYLLQKYPENLLSLRY LSSYENSTTHPYIMRHRRTHKHPAQDDLTYEAQN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11524-PA | 167 | GF11524-PA | 84..167 | 1..84 | 415 | 90.5 | Plus |
Dana\GF11525-PA | 153 | GF11525-PA | 77..153 | 1..80 | 149 | 41.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19875-PA | 167 | GG19875-PA | 84..167 | 1..84 | 459 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22048-PA | 167 | GH22048-PA | 84..167 | 1..84 | 381 | 78.6 | Plus |
Dgri\GH22049-PA | 156 | GH22049-PA | 78..156 | 1..80 | 137 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tina-1-PB | 84 | CG2803-PB | 1..84 | 1..84 | 462 | 100 | Plus |
Tina-1-PA | 167 | CG2803-PA | 84..167 | 1..84 | 462 | 100 | Plus |
CG2811-PA | 157 | CG2811-PA | 81..157 | 1..80 | 139 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19134-PA | 168 | GI19134-PA | 84..165 | 1..82 | 412 | 90.2 | Plus |
Dmoj\GI19135-PA | 156 | GI19135-PA | 78..156 | 1..80 | 139 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10895-PA | 167 | GL10895-PA | 84..167 | 1..84 | 425 | 90.5 | Plus |
Dper\GL10896-PA | 153 | GL10896-PA | 75..153 | 1..80 | 135 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15466-PA | 167 | GA15466-PA | 84..167 | 1..84 | 425 | 90.5 | Plus |
Dpse\GA15469-PA | 153 | GA15469-PA | 75..153 | 1..80 | 139 | 37.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11776-PA | 167 | GM11776-PA | 84..167 | 1..84 | 456 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24906-PA | 167 | GD24906-PA | 84..167 | 1..84 | 459 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22267-PA | 168 | GJ22267-PA | 84..168 | 1..84 | 410 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20729-PA | 168 | GK20729-PA | 84..165 | 1..82 | 412 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11399-PA | 167 | GE11399-PA | 84..167 | 1..84 | 452 | 98.8 | Plus |