BDGP Sequence Production Resources |
Search the DGRC for GH28577
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 285 |
Well: | 77 |
Vector: | pOT2 |
Associated Gene/Transcript | igl-RB |
Protein status: | GH28577.pep: gold |
Preliminary Size: | 1987 |
Sequenced Size: | 1910 |
Gene | Date | Evidence |
---|---|---|
CG18285 | 2001-01-01 | Release 2 assignment |
CG18285 | 2001-09-19 | Blastp of sequenced clone |
CG18285 | 2003-01-01 | Sim4 clustering to Release 3 |
igl | 2008-04-29 | Release 5.5 accounting |
igl | 2008-08-15 | Release 5.9 accounting |
igl | 2008-12-18 | 5.12 accounting |
1910 bp (1910 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060354
> GH28577.complete TTCGGTTCGATAGGTTGCCCCAAAGAGAGAAAGTCCAAGCGGAAGTCCTT TGAGCCCAGCAAAAGGGAAAGTGCGCGCGAATTTAAATATTAATAGAATA AAACAAACTATCGGTTTGTACGTGTTTTGTGCTGAGCCTTTCTGCAGAAG AGCCAAGCAAAAGCCGCAACAAAAATCCAAGCCGTCTTTCGAGGCCACAA AGTGAGAGAAACCATGAAAAAATCGGAAACCAAAACTGCGACCAACAACG GCAGTGCCGCCGGAGCAGCTCCATCGGCAGCAGCCGCCGAGGCAGCCGCA TCCGCAGAGCCAACCAAAGCCGAGCTAGAGGCTGAATTCGATCCCAACGA CAAGGATCTGTGCCATGCTGCATTGAAGATTCAGTCCACTTTCCGTGGTC ATTTGGCACGCAAGCTGGTGAACAAGGATGCGCCCGAGGACGAGGACATT CAGGAGATAACCAAGAAGGTGGCCGAGGAGTTGGACATAGATTTAACCGA TCCCGAGCTTAACAAGGCTGCTACCAAAATTCAGGCCTCGTTCCGGGGCC ACAAGACCCGCAAGGATGCCAATCCCGAGTAAGGAGCTCACCACTTGAAT TTTCATTGCCCTCGGTGGGCTAGTCACAGATGATGAAGCTAACTTAATGC TTACGCAAGTGAATAAAATTATTGGTAAATTGTAAATGTGTAAAAGGCCA ATCGAGATGAGGGCACACAATTGTAAACTTTTTAGTGAATATGCTTTAGC CGGCATGGCGAACCCAAATGATTCTCATAATTATTAAATAAATTAAGTCG AGGGCAAAGTTACATTTAGTTTGCAAAGCTTTAATAAATGAATAGTAAAA CCACATTATGCGAATGATGATTCGGAGTTACGCGACATTTACAGATACAT TATTGCGGCTTGTCTTGTTCTATTACATACCCTTAGAGTCGTAAATTGAT AAATTTGTATTAGTTAATATTTAATTATATTACATTTCGTTTTTGGACTT TGCTATTAAACCCAAGACCGTAACTAAACCAAAAATAAAGTGAACTAACG TTAAATTGTCAAAGAAAAACCTAATGTTACAAAATAATAAATAAAAGGCA CGATGTTCCATAAACTTTATTGTAGGGAAATGAGAAACCAAACAAAAGAC AAATGCAAGGAAACTGCTGAACAAATTTTTGGGAAATCATTTCCATTTTG TCGGGCCAATGCCAAAAGTAAAAAATTAATTGTACCTACGAGCGTATGAA TATGAATTAGAAACCAAAGGAACTCAATGTTGTTTCAAATTAAGGCAAAT TAGGGGTACCCAAGCAACATGATGCAGCTTCGAGTCGTCAACTCAACAAT TTTTCAGCCCTCGGGCTCTATATATAAACTGAAAAGTCAATGAACATGAA GATAACTAATCTGGTGGCACAATTTTCGTTTTTCTACCAAGTGTATTACA ATATTTGTCTACTTAACAATTGATCCTCGAGTGGGAAACTGAAAAACACA CATACATATATATATACCTATACAGATGCAAAGACAGGTATTAGACCGAG TTGAATTGGAAAATATTTTTTTTCGGCCACAGCTGAGAAAATTGTTACCA TGTGGCAACGGAAGCCAATAATGAAATATTTAAAATTCAAATCAATTAAC TACAAAGAATTAATAACAAGCTAATGAACATAATTGAAATTATATTAGAG ATCAAAGTCAAATTCAAAAAAACATTGCATAAAATTATTACATTTAAAAA GCAAATGGGTAAAACCAATTCTATGTGGATAAATGAAAAGAAAAAACCAG AATATGAAAGCAAACCATATACAAGCCGAACAAACAAAGAATGTCCCAAC TAAATTTTAATTGAGTAATAAAAATAAATACAATAAAGATGCAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 11075954..11077489 | 355..1892 | 7550 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 11067710..11067909 | 156..355 | 1000 | 100 | Plus |
chr2R | 21145070 | chr2R | 11052130..11052286 | 1..157 | 785 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 15188755..15190294 | 355..1894 | 7700 | 100 | Plus |
2R | 25286936 | 2R | 15180511..15180710 | 156..355 | 1000 | 100 | Plus |
2R | 25286936 | 2R | 15164944..15165100 | 1..157 | 785 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 15189954..15191493 | 355..1894 | 7700 | 100 | Plus |
2R | 25260384 | 2R | 15181710..15181909 | 156..355 | 1000 | 100 | Plus |
2R | 25260384 | 2R | 15166143..15166299 | 1..157 | 785 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
roo | 9092 | roo DM_ROO 9092bp | 1194..1530 | 1494..1810 | 184 | 57.5 | Plus |
McClintock | 6450 | McClintock McCLINTOCK 6450bp | 1093..1350 | 1617..1879 | 176 | 57.2 | Plus |
copia | 5143 | copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). | 964..1213 | 1641..1889 | 157 | 56.4 | Plus |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 870..1030 | 1015..1175 | 155 | 60 | Plus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 1836..1939 | 1724..1623 | 145 | 62.5 | Minus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 9718..9821 | 1724..1623 | 145 | 62.5 | Minus |
invader4 | 3105 | invader4 INVADER4 3105bp | 1514..1617 | 1778..1878 | 134 | 62.9 | Plus |
Dbuz\Kepler | 722 | Dbuz\Kepler KEPLER 722bp | 441..512 | 1492..1565 | 130 | 67.6 | Plus |
Dbuz\Kepler | 722 | Dbuz\Kepler KEPLER 722bp | 374..466 | 1445..1541 | 124 | 61.9 | Plus |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 807..958 | 1008..1152 | 123 | 56.9 | Plus |
Dbuz\Kepler | 722 | Dbuz\Kepler KEPLER 722bp | 451..496 | 1492..1537 | 122 | 73.9 | Plus |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 1058..1096 | 1887..1849 | 122 | 85 | Minus |
McClintock | 6450 | McClintock McCLINTOCK 6450bp | 5786..5855 | 1617..1687 | 118 | 64.8 | Plus |
Dbuz\BuT2 | 2775 | Dbuz\BuT2 BUT2 2775bp | 1311..1420 | 1499..1608 | 117 | 59.8 | Plus |
Dbuz\Kepler | 722 | Dbuz\Kepler KEPLER 722bp | 419..492 | 1486..1558 | 115 | 63.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11052130..11052286 | 1..157 | 100 | -> | Plus |
chr2R | 11067712..11067909 | 158..355 | 100 | -> | Plus |
chr2R | 11075955..11077489 | 356..1892 | 96 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
igl-RA | 289..723 | 147..582 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
igl-RA | 289..723 | 147..582 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
igl-RA | 289..723 | 147..582 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
igl-RA | 289..723 | 147..582 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
igl-RA | 289..723 | 147..582 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
igl-RB | 28..1919 | 1..1892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
igl-RB | 28..1919 | 1..1892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
igl-RB | 25..1916 | 1..1892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
igl-RB | 28..1919 | 1..1892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
igl-RB | 25..1916 | 1..1892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15164944..15165100 | 1..157 | 100 | -> | Plus |
2R | 15180513..15180710 | 158..355 | 100 | -> | Plus |
2R | 15188756..15190292 | 356..1892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15164944..15165100 | 1..157 | 100 | -> | Plus |
2R | 15180513..15180710 | 158..355 | 100 | -> | Plus |
2R | 15188756..15190292 | 356..1892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15164944..15165100 | 1..157 | 100 | -> | Plus |
2R | 15180513..15180710 | 158..355 | 100 | -> | Plus |
2R | 15188756..15190292 | 356..1892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11052449..11052605 | 1..157 | 100 | -> | Plus |
arm_2R | 11068018..11068215 | 158..355 | 100 | -> | Plus |
arm_2R | 11076261..11077797 | 356..1892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15166143..15166299 | 1..157 | 100 | -> | Plus |
2R | 15181712..15181909 | 158..355 | 100 | -> | Plus |
2R | 15189955..15191491 | 356..1892 | 100 | Plus |
Translation from 213 to 581
> GH28577.pep MKKSETKTATNNGSAAGAAPSAAAAEAAASAEPTKAELEAEFDPNDKDLC HAALKIQSTFRGHLARKLVNKDAPEDEDIQEITKKVAEELDIDLTDPELN KAATKIQASFRGHKTRKDANPE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12313-PA | 237 | GF12313-PA | 116..237 | 1..122 | 519 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20500-PA | 240 | GG20500-PA | 119..240 | 1..122 | 621 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21112-PA | 252 | GH21112-PA | 126..252 | 1..122 | 462 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
igl-PC | 122 | CG18285-PC | 1..122 | 1..122 | 613 | 100 | Plus |
igl-PB | 122 | CG18285-PB | 1..122 | 1..122 | 613 | 100 | Plus |
igl-PA | 240 | CG18285-PA | 119..240 | 1..122 | 613 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18717-PA | 242 | GI18717-PA | 122..242 | 1..122 | 482 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10612-PA | 240 | GL10612-PA | 121..240 | 1..122 | 498 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14874-PA | 240 | GA14874-PA | 121..240 | 1..122 | 498 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21592-PA | 240 | GM21592-PA | 119..240 | 1..122 | 611 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11100-PA | 240 | GD11100-PA | 119..240 | 1..122 | 621 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21734-PA | 239 | GJ21734-PA | 118..239 | 1..122 | 505 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19703-PA | 246 | GK19703-PA | 126..246 | 1..122 | 471 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13633-PA | 240 | GE13633-PA | 119..240 | 1..122 | 617 | 99.2 | Plus |
Translation from 213 to 581
> GH28577.hyp MKKSETKTATNNGSAAGAAPSAAAAEAAASAEPTKAELEAEFDPNDKDLC HAALKIQSTFRGHLARKLVNKDAPEDEDIQEITKKVAEELDIDLTDPELN KAATKIQASFRGHKTRKDANPE*