BDGP Sequence Production Resources |
Search the DGRC for GH28769
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 287 |
Well: | 69 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8006-RA |
Protein status: | GH28769.pep: gold |
Preliminary Size: | 1876 |
Sequenced Size: | 1754 |
Gene | Date | Evidence |
---|---|---|
CG8006 | 2001-01-01 | Release 2 assignment |
CG8006 | 2001-11-09 | Blastp of sequenced clone |
CG8006 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8006 | 2008-04-29 | Release 5.5 accounting |
CG8006 | 2008-08-15 | Release 5.9 accounting |
CG8006 | 2008-12-18 | 5.12 accounting |
1754 bp (1754 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069238
> GH28769.complete ATTTTTTGGGAACAAAATCAGTTGATTCCGGTTGAATATGCGAATGTGGC CATGAAGGATCTAAGCGAGGAGTTACTGGATCGCCATTTCAGGCAGCAGC TAGCCAGTTACAAGTATGCCGATCAGGCAAGGGCTAAGCAGTCGGATCGC CCCATCATGGCCAGATGGATAAAGATATTCGAGAAGGCTCCTCTCAGCGA GAAGTTGGCCCGAAATAGCCTGATGCTGCTCATGCATGGCCACTTGAAGG ACTTTGGAGTGCTCAAGGAACCGTTCACGGATGTGCGTAACTACAGTAGG AATCTGAACGTAATTTTGGATGAGTACAGAGGCCAGCCATGTAAGAAGTT AGCTACTGGCAAATCACCTACACTGCTCAAGAAGTGCTCGACTCAAATTT TACGACCCAGGAAACTGGAACCCATCAAGGAGGTTTCCGAACAATCGGAA AATGATCCTACGACCAGTAGTTTTGCCAGCATTGTGACAATAATACGAAA AACAAATACGCGATCCTCTGACTCGAAGGATAGCCAAGTTTATCCAAGGA CTGGCTTCGAGTCCCCAAATGGTGCTGATAGTCACACTGTGAAGAAGAGA GTCGAACTATTGGAGTATGAGCTCTCGAGAAATAAGCAGCATCCATCGAG CTCCACATTCAATCGGGATGCACCTGACAGCGGAAGAACCCATTCCTCCA GTTCCTTATCCCAAGAGAAACTCATCAAGATCACCAATGTCATAGATCAG GTCAACCGCCGATCAAGTGCTGTGAAAAATCTGAGGGATTGCTTTGAGGA AATGGCCGAACGTTTGAAAAACACAATCGAATCAAAATATAAATCGAAGA TTCCGCCGCCAAAGCCGCCAAAGAAGATTCATAAGGATGTTCCTGCCGAG CGAGCCAGTGCCCAATGCCATTCTCCTATTGGCGTTACGGACCCAACTGT TCAGGGATTGCTGATGCGTAGAGAACAGCTGCGTGTCCAGTGCTTGGCAT ACTACAACTCGGATGGCACGATGAAGGATGTGATGGACATGCCTGATCTC TCAATGGATACTATGAAAGCTGAACAGAGAGTCAGAGGGTTCATAGTTGG TGCCTACAAGGCCTTGGAGCGTCTGAAACGCTGGCGCGGAAAATCCAAAC GGTTGAGATTTTTCCAAACCTGCTTCCAGAAATTTGGGCTTCGTAATTTT TGGGAACTACAGGCTCTGGATCGAAGATTCGAGAGGGTGGCGCTCAAGTG GTATCGCCATAAGGTGATGGCATGTCTACAGAACACCTGGCTTACTTATC GCAGAAGCATCTTGGCCCAGAAGCTATCGTACGACGAGGACGATCTACAG CAGATGCGCCACCAGATTGAGCTGCAGGAGGAGTTGCAGCGGGAGCGAAT GGTCCACCTGGCCAAGATCATGGAACTGTGCAGGAGCAACTGTCACGGGA TCGTCACGCATAAAGTCCTTAGCAAGATGCTCGATCGCCTGGAGGATGAA CACGACCAGCTGGCCCGGGATCTCAAATCACTGCTCCGCCAGAAGGACCA ACTGTTCCAGTAAAGCATCCTGCGAATCCGCAACTTTTCTCGCACCAGAT TTTTGATATCATTTTGCACCTTTGTGTAAGCCCGTTTACACCGCGAGCTA CGCTGCTCGTTAATTAATTTAAATACTACGCTTTATTAAATTAAGAACTG CTGACAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8006-RA | 1740 | CG8006-RA | 25..1734 | 1..1710 | 8550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 8203874..8205582 | 1..1709 | 8275 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 8211914..8213623 | 1..1710 | 8550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 8205014..8206723 | 1..1710 | 8550 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 8203874..8205582 | 1..1709 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8006-RA | 1..1512 | 52..1563 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8006-RA | 1..1512 | 52..1563 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8006-RA | 1..1512 | 52..1563 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8006-RA | 1..1512 | 52..1563 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8006-RA | 1..1512 | 52..1563 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8006-RA | 25..1733 | 1..1709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8006-RA | 25..1733 | 1..1709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8006-RA | 25..1733 | 1..1709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8006-RA | 25..1733 | 1..1709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8006-RA | 25..1733 | 1..1709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8211914..8213622 | 1..1709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8211914..8213622 | 1..1709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8211914..8213622 | 1..1709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 8205014..8206722 | 1..1709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8205014..8206722 | 1..1709 | 100 | Plus |
Translation from 0 to 1562
> GH28769.hyp IFWEQNQLIPVEYANVAMKDLSEELLDRHFRQQLASYKYADQARAKQSDR PIMARWIKIFEKAPLSEKLARNSLMLLMHGHLKDFGVLKEPFTDVRNYSR NLNVILDEYRGQPCKKLATGKSPTLLKKCSTQILRPRKLEPIKEVSEQSE NDPTTSSFASIVTIIRKTNTRSSDSKDSQVYPRTGFESPNGADSHTVKKR VELLEYELSRNKQHPSSSTFNRDAPDSGRTHSSSSLSQEKLIKITNVIDQ VNRRSSAVKNLRDCFEEMAERLKNTIESKYKSKIPPPKPPKKIHKDVPAE RASAQCHSPIGVTDPTVQGLLMRREQLRVQCLAYYNSDGTMKDVMDMPDL SMDTMKAEQRVRGFIVGAYKALERLKRWRGKSKRLRFFQTCFQKFGLRNF WELQALDRRFERVALKWYRHKVMACLQNTWLTYRRSILAQKLSYDEDDLQ QMRHQIELQEELQRERMVHLAKIMELCRSNCHGIVTHKVLSKMLDRLEDE HDQLARDLKSLLRQKDQLFQ*
Translation from 51 to 1562
> GH28769.pep MKDLSEELLDRHFRQQLASYKYADQARAKQSDRPIMARWIKIFEKAPLSE KLARNSLMLLMHGHLKDFGVLKEPFTDVRNYSRNLNVILDEYRGQPCKKL ATGKSPTLLKKCSTQILRPRKLEPIKEVSEQSENDPTTSSFASIVTIIRK TNTRSSDSKDSQVYPRTGFESPNGADSHTVKKRVELLEYELSRNKQHPSS STFNRDAPDSGRTHSSSSLSQEKLIKITNVIDQVNRRSSAVKNLRDCFEE MAERLKNTIESKYKSKIPPPKPPKKIHKDVPAERASAQCHSPIGVTDPTV QGLLMRREQLRVQCLAYYNSDGTMKDVMDMPDLSMDTMKAEQRVRGFIVG AYKALERLKRWRGKSKRLRFFQTCFQKFGLRNFWELQALDRRFERVALKW YRHKVMACLQNTWLTYRRSILAQKLSYDEDDLQQMRHQIELQEELQRERM VHLAKIMELCRSNCHGIVTHKVLSKMLDRLEDEHDQLARDLKSLLRQKDQ LFQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25103-PA | 206 | GF25103-PA | 1..177 | 1..138 | 335 | 43.5 | Plus |
Dana\GF24699-PA | 402 | GF24699-PA | 1..93 | 1..94 | 178 | 40.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14288-PA | 554 | GG14288-PA | 1..554 | 1..503 | 1765 | 65.4 | Plus |
Dere\GG15102-PA | 391 | GG15102-PA | 1..95 | 1..94 | 199 | 42.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15496-PA | 403 | GH15496-PA | 3..97 | 2..96 | 265 | 50.5 | Plus |
Dgri\GH15980-PA | 482 | GH15980-PA | 1..95 | 1..95 | 160 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8006-PA | 503 | CG8006-PA | 1..503 | 1..503 | 2603 | 100 | Plus |
CG7366-PA | 389 | CG7366-PA | 1..95 | 1..94 | 180 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16772-PA | 573 | GI16772-PA | 2..98 | 1..97 | 269 | 51.5 | Plus |
Dmoj\GI16631-PA | 475 | GI16631-PA | 1..94 | 1..94 | 186 | 40.4 | Plus |
Dmoj\GI16465-PA | 1457 | GI16465-PA | 16..129 | 5..126 | 164 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22537-PA | 794 | GL22537-PA | 3..162 | 2..161 | 293 | 40 | Plus |
Dper\GL22537-PA | 794 | GL22537-PA | 583..779 | 303..501 | 248 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20761-PA | 897 | GA20761-PA | 3..161 | 2..161 | 297 | 39.6 | Plus |
Dpse\GA20761-PA | 897 | GA20761-PA | 655..882 | 270..501 | 265 | 30.2 | Plus |
Dpse\GA20300-PA | 588 | GA20300-PA | 5..103 | 4..102 | 165 | 36.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25030-PA | 213 | GM25030-PA | 23..213 | 313..503 | 910 | 89 | Plus |
Dsec\GM24959-PA | 385 | GM24959-PA | 1..95 | 1..94 | 186 | 41.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14063-PA | 333 | GD14063-PA | 65..333 | 245..503 | 1080 | 81.8 | Plus |
Dsim\GD13009-PA | 367 | GD13009-PA | 1..95 | 1..94 | 185 | 41.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12517-PA | 430 | GJ12517-PA | 1..98 | 1..98 | 259 | 51 | Plus |
Dvir\GJ12886-PA | 491 | GJ12886-PA | 1..94 | 1..94 | 187 | 42.6 | Plus |
Dvir\GJ15944-PA | 1343 | GJ15944-PA | 26..114 | 4..92 | 178 | 38.2 | Plus |