BDGP Sequence Production Resources |
Search the DGRC for GH28782
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 287 |
Well: | 82 |
Vector: | pOT2 |
Associated Gene/Transcript | CREG-RA |
Protein status: | GH28782.pep: gold |
Preliminary Size: | 1077 |
Sequenced Size: | 921 |
Gene | Date | Evidence |
---|---|---|
CG5413 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5413 | 2002-04-26 | Blastp of sequenced clone |
CREG | 2008-04-29 | Release 5.5 accounting |
CREG | 2008-08-15 | Release 5.9 accounting |
CREG | 2008-12-18 | 5.12 accounting |
921 bp (921 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113353
> GH28782.complete ATCGCAAAGCAGAAGTACCGACAGGGGCCATTAGTCCAGATCCTCCAGTC TAGCCATGAAAACCTTTCACTCCCTACTATTCGCCCTGATTTTGGCCCTC GTGAGCCTGGACCCCTCTTCCGGTTACTCCCGCCGGAAAGATGAGCGTAT AATTAGAGAATATAAGCGAGAGCAAGAGTTAAATCACGCCAAGATCGCCA GAGATTTGGTCCATCGCGCCAATTGGGCGGCTGTGGGAAGTCTCTCCACC AACGAACGGGTGAAGGGGTATCCCATGGTCAACATTATCTCCATCGACGA CAGCGATGCTAATAACAGGTCCACTGGACGTATTCGATTCCTGCTAACCG ATTTGGACTTCACTGGTCCCGACTGGCAGAAGGACAACAAGGTCACACTC CTGTTCAGTGACGAGCAGACCCTAAGATGCAAGGAGGGCGGAAAGGATCC CATGGAGCCTACATGTGCCCGTTCCATGATCAGTGGACAGGTGAAGAAGA TGGATCCTAGCGACAAAAGCTATCAGCCATCGCTGGATGCCTATGTGAGG CGTCATCCAGCTGCCATCAATTGGGTAAAAGCTCACAATTTCTACCTTTG CGAACTGGAAATTAGCAATATCTTTGTTCTGGACTTCTATGGAGGTCCTC ATAAAGTGAGCGCCTCTGACTATTACGCTGTTTCGAATTGATGAACTCCT CCAAAAGCAATCCAACTGACGCCTCATATACTTTGTCAAAAAATGAAATG ATAAGCATATTTGCACAACATGTCTGCCACAAAGGGAAAGAATGAAGACA AAGGCCTTTATGAAAGCCACTTATCAGTTGAGCTCTGTGATTTCAATCGA TAGAACAATAACTTTGATATAAATAAAAATACATTCCGTTGAATGTACTC TGACAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 13218188..13218641 | 499..46 | 2210 | 99.1 | Minus |
chr3R | 27901430 | chr3R | 13217651..13217974 | 904..580 | 1515 | 98.5 | Minus |
chr3R | 27901430 | chr3R | 13218045..13218128 | 581..498 | 420 | 100 | Minus |
chr3R | 27901430 | chr3R | 13218908..13218955 | 48..1 | 240 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 17393816..17394269 | 499..46 | 2270 | 100 | Minus |
3R | 32079331 | 3R | 17393277..17393602 | 905..580 | 1630 | 100 | Minus |
3R | 32079331 | 3R | 17393673..17393758 | 581..496 | 430 | 100 | Minus |
3R | 32079331 | 3R | 17394536..17394583 | 48..1 | 240 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 17134647..17135100 | 499..46 | 2270 | 100 | Minus |
3R | 31820162 | 3R | 17134108..17134433 | 905..580 | 1630 | 100 | Minus |
3R | 31820162 | 3R | 17134504..17134589 | 581..496 | 430 | 100 | Minus |
3R | 31820162 | 3R | 17135367..17135414 | 48..1 | 240 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 13217651..13217972 | 582..904 | 98 | <- | Minus |
chr3R | 13218045..13218126 | 500..581 | 100 | <- | Minus |
chr3R | 13218188..13218638 | 49..499 | 99 | <- | Minus |
chr3R | 13218908..13218955 | 1..48 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RB | 1..636 | 56..691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RB | 1..636 | 56..691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RA | 1..636 | 56..691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RB | 1..636 | 56..691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RA | 1..636 | 56..691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RB | 1..904 | 1..904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RB | 58..961 | 1..904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RB | 58..961 | 1..904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RB | 1..904 | 1..904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RB | 58..961 | 1..904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17393278..17393600 | 582..904 | 100 | <- | Minus |
3R | 17393673..17393754 | 500..581 | 100 | <- | Minus |
3R | 17393816..17394266 | 49..499 | 100 | <- | Minus |
3R | 17394536..17394583 | 1..48 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17393278..17393600 | 582..904 | 100 | <- | Minus |
3R | 17393673..17393754 | 500..581 | 100 | <- | Minus |
3R | 17393816..17394266 | 49..499 | 100 | <- | Minus |
3R | 17394536..17394583 | 1..48 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17393278..17393600 | 582..904 | 100 | <- | Minus |
3R | 17393673..17393754 | 500..581 | 100 | <- | Minus |
3R | 17393816..17394266 | 49..499 | 100 | <- | Minus |
3R | 17394536..17394583 | 1..48 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 13219000..13219322 | 582..904 | 100 | <- | Minus |
arm_3R | 13219395..13219476 | 500..581 | 100 | <- | Minus |
arm_3R | 13219538..13219988 | 49..499 | 100 | <- | Minus |
arm_3R | 13220258..13220305 | 1..48 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17134109..17134431 | 582..904 | 100 | <- | Minus |
3R | 17134504..17134585 | 500..581 | 100 | <- | Minus |
3R | 17134647..17135097 | 49..499 | 100 | <- | Minus |
3R | 17135367..17135414 | 1..48 | 100 | Minus |
Translation from 55 to 690
> GH28782.pep MKTFHSLLFALILALVSLDPSSGYSRRKDERIIREYKREQELNHAKIARD LVHRANWAAVGSLSTNERVKGYPMVNIISIDDSDANNRSTGRIRFLLTDL DFTGPDWQKDNKVTLLFSDEQTLRCKEGGKDPMEPTCARSMISGQVKKMD PSDKSYQPSLDAYVRRHPAAINWVKAHNFYLCELEISNIFVLDFYGGPHK VSASDYYAVSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16884-PA | 211 | GF16884-PA | 7..209 | 7..209 | 883 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16779-PA | 211 | GG16779-PA | 1..211 | 1..211 | 983 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17497-PA | 212 | GH17497-PA | 10..211 | 7..210 | 735 | 65.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CREG-PD | 211 | CG5413-PD | 1..211 | 1..211 | 1107 | 100 | Plus |
CREG-PB | 211 | CG5413-PB | 1..211 | 1..211 | 1107 | 100 | Plus |
CREG-PA | 211 | CG5413-PA | 1..211 | 1..211 | 1107 | 100 | Plus |
CREG-PC | 173 | CG5413-PC | 1..149 | 1..149 | 766 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22825-PA | 207 | GI22825-PA | 3..205 | 7..209 | 776 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23943-PA | 211 | GL23943-PA | 21..209 | 21..209 | 837 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18865-PA | 211 | GA18865-PA | 1..209 | 1..209 | 867 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15369-PA | 211 | GM15369-PA | 1..211 | 1..211 | 1036 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20237-PA | 211 | GD20237-PA | 1..211 | 1..211 | 1038 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22827-PA | 211 | GJ22827-PA | 8..209 | 8..209 | 755 | 66.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11455-PA | 215 | GK11455-PA | 14..214 | 11..210 | 806 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24171-PA | 211 | GE24171-PA | 23..211 | 23..211 | 985 | 94.7 | Plus |
Translation from 55 to 690
> GH28782.hyp MKTFHSLLFALILALVSLDPSSGYSRRKDERIIREYKREQELNHAKIARD LVHRANWAAVGSLSTNERVKGYPMVNIISIDDSDANNRSTGRIRFLLTDL DFTGPDWQKDNKVTLLFSDEQTLRCKEGGKDPMEPTCARSMISGQVKKMD PSDKSYQPSLDAYVRRHPAAINWVKAHNFYLCELEISNIFVLDFYGGPHK VSASDYYAVSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CREG-PD | 211 | CG5413-PD | 1..211 | 1..211 | 1107 | 100 | Plus |
CREG-PB | 211 | CG5413-PB | 1..211 | 1..211 | 1107 | 100 | Plus |
CREG-PA | 211 | CG5413-PA | 1..211 | 1..211 | 1107 | 100 | Plus |
CREG-PC | 173 | CG5413-PC | 1..149 | 1..149 | 766 | 99.3 | Plus |