BDGP Sequence Production Resources |
Search the DGRC for GH28815
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 288 |
Well: | 15 |
Vector: | pOT2 |
Associated Gene/Transcript | CG33722-RB |
Protein status: | GH28815.pep: gold |
Sequenced Size: | 1565 |
Gene | Date | Evidence |
---|---|---|
CG31188 | 2004-03-31 | Blastp of sequenced clone |
CG33722 | 2008-04-29 | Release 5.5 accounting |
CG33722 | 2008-08-15 | Release 5.9 accounting |
CG33722 | 2008-12-18 | 5.12 accounting |
1565 bp (1565 high quality bases) assembled on 2004-03-31
GenBank Submission: BT012497
> GH28815.complete CTTTTTTGCCTCTACCTCGTAGCTGCCATACAGATACGTATCCTTGTAGG GAAGTGGCCAATCCGATGGACAAGCGCGTAACAGTCCTGCTGCCCAATGG TCGGCGGCAGAATGTGAACGTGACGGCGAACATGACGCTGTTGGAGATTC TGGAGACGGCCTGCTTCAAGCACGGCTACGATGCGGAGGAGCACTGCCTC AAGTTTCACAACAAGGTGGTCGGATTGACGCAACAGTTCCGTTTTAGTGG CCTGCCTAACAACTGTGTCCTGGAGATGGAGCAAACAGAAAAGCGGCGCA CACTGAGTAACGTTCTTGTCTGCGTCCAATTGAACGACGGTTCCCGCCAG CAAGGGGACTTCTCGCCCAACGACACCATATGGCTGGTGGTCGAGAAGCT TTGCGAAACACATGTAAAGGCTTACGAAAGCCCCGTCATCATCTACATGC GCAGCGAGGTCATAGGACATGAGCAGATGCGACAGACCACTCTTAAGTCC CTAGGAATCCTCGAGGGTCGTGCCATGATGCGTCTTATCGACAAAAAACC CGAGGACCTTAAGACCCAGGCAAATGTGTATAAAGCTCCCGCTGTCAAGC CTCGGGTGGACAATGACGACCAGCCCAGTACCTCCCGCTCTGCAATGGCA GCTGGTGGCAGCGGAGGAGGAGGTGGATTTGCTCTTACCAGCAACATGAT CAAGAATTTGAAACGCACGGCTCCTGAAGAAAAGGCCAGCGGTAGCGAAC CAGCCAAGCCCTTAGGGGAATCCAATCAAGAGCAGCAGCCTCAGCCAGAA CCACCTAAATATGACTGGGGCAATGGTTCCGGATACTTAATGAACCACCC TCCCGAGCAGAAGCAGGCAGAAAACGAAGTCGAAGAGAATCCAGGCAGGG CTCCACCAGTGGTGAAAATAATTGGGCCACGCCAGGCTGTACTCTTTTCC TTGGACGAATCCAAGAAAAATGCGAATGACCTGCCGGACTCATTTTTCGA CTTGACCGTCAACGATTTGAAGATGGTACTCCGTGATTTAAAGCGTACGT CGAGCGGAGATGACGACGCTCCCTTGCTGACAGCAAAGCTAAGGGAATTG GAGCGCCAAAAGGCCATGCTGGCTAAGCTTAACCAGTACAAGGACTGTGT GCTGCGCATTCAGTTTCCCGATCGCTTCGTGCTCCAGGGCATGTTTAAGC CGCACGAGCCCCTTTCCAAGGTGGAGGATTTTGTTCGGGAGTTTTTGGTT CAGCCAGGTGAGCAATTCCATCTCTTCACCATTCCACCGAAGAAGGTGCT GCCCTCCGGTGAGACGCTCCTGGAGCTGAATTTTGTTCCAAATGCCATCG TGCATTTTGGCTTTATCAAGGACTCGCTCAATGCGGTGAGCAATCGATTC GTGAAGGAGGAGTACGTGGATCAGTTGACCTCCGAGGAGGGAGCGCACTA CGCAGTGCAAAAGTACCGCCTTACCCGTGCAACGGCCTCAGGGTCTAGTT AATAGATACATACATACAGTCTGTGTGATATTAAATGAATCCGCTTTAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 4070159..4071705 | 1..1547 | 7735 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 8244148..8245695 | 1..1548 | 7740 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 7984979..7986526 | 1..1548 | 7740 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 669..714 | 693..647 | 115 | 74.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4070159..4071705 | 1..1547 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33722-RB | 1..1437 | 66..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33722-RB | 1..1437 | 66..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33722-RC | 1..1437 | 66..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33722-RB | 1..1437 | 66..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33722-RB | 1..1437 | 66..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33722-RB | 1..1547 | 1..1547 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33722-RB | 1..1547 | 1..1547 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33722-RB | 1..1547 | 1..1547 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33722-RB | 1..1547 | 1..1547 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33722-RB | 1..1547 | 1..1547 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8244148..8245694 | 1..1547 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8244148..8245694 | 1..1547 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8244148..8245694 | 1..1547 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4069870..4071416 | 1..1547 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7984979..7986525 | 1..1547 | 100 | Plus |
Translation from 2 to 1501
> GH28815.hyp FLPLPRSCHTDTYPCREVANPMDKRVTVLLPNGRRQNVNVTANMTLLEIL ETACFKHGYDAEEHCLKFHNKVVGLTQQFRFSGLPNNCVLEMEQTEKRRT LSNVLVCVQLNDGSRQQGDFSPNDTIWLVVEKLCETHVKAYESPVIIYMR SEVIGHEQMRQTTLKSLGILEGRAMMRLIDKKPEDLKTQANVYKAPAVKP RVDNDDQPSTSRSAMAAGGSGGGGGFALTSNMIKNLKRTAPEEKASGSEP AKPLGESNQEQQPQPEPPKYDWGNGSGYLMNHPPEQKQAENEVEENPGRA PPVVKIIGPRQAVLFSLDESKKNANDLPDSFFDLTVNDLKMVLRDLKRTS SGDDDAPLLTAKLRELERQKAMLAKLNQYKDCVLRIQFPDRFVLQGMFKP HEPLSKVEDFVREFLVQPGEQFHLFTIPPKKVLPSGETLLELNFVPNAIV HFGFIKDSLNAVSNRFVKEEYVDQLTSEEGAHYAVQKYRLTRATASGSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33722-PE | 478 | CG33722-PE | 1..478 | 22..499 | 2484 | 100 | Plus |
CG33722-PD | 478 | CG33722-PD | 1..478 | 22..499 | 2484 | 100 | Plus |
CG33722-PB | 478 | CG33722-PB | 1..478 | 22..499 | 2484 | 100 | Plus |
CG33722-PC | 478 | CG33722-PC | 1..478 | 22..499 | 2484 | 100 | Plus |
Translation from 65 to 1501
> GH28815.pep MDKRVTVLLPNGRRQNVNVTANMTLLEILETACFKHGYDAEEHCLKFHNK VVGLTQQFRFSGLPNNCVLEMEQTEKRRTLSNVLVCVQLNDGSRQQGDFS PNDTIWLVVEKLCETHVKAYESPVIIYMRSEVIGHEQMRQTTLKSLGILE GRAMMRLIDKKPEDLKTQANVYKAPAVKPRVDNDDQPSTSRSAMAAGGSG GGGGFALTSNMIKNLKRTAPEEKASGSEPAKPLGESNQEQQPQPEPPKYD WGNGSGYLMNHPPEQKQAENEVEENPGRAPPVVKIIGPRQAVLFSLDESK KNANDLPDSFFDLTVNDLKMVLRDLKRTSSGDDDAPLLTAKLRELERQKA MLAKLNQYKDCVLRIQFPDRFVLQGMFKPHEPLSKVEDFVREFLVQPGEQ FHLFTIPPKKVLPSGETLLELNFVPNAIVHFGFIKDSLNAVSNRFVKEEY VDQLTSEEGAHYAVQKYRLTRATASGSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22989-PA | 478 | GF22989-PA | 1..477 | 1..477 | 2007 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23811-PA | 478 | GG23811-PA | 1..478 | 1..478 | 2317 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14200-PA | 477 | GH14200-PA | 1..477 | 1..477 | 1671 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33722-PE | 478 | CG33722-PE | 1..478 | 1..478 | 2484 | 100 | Plus |
CG33722-PD | 478 | CG33722-PD | 1..478 | 1..478 | 2484 | 100 | Plus |
CG33722-PB | 478 | CG33722-PB | 1..478 | 1..478 | 2484 | 100 | Plus |
CG33722-PC | 478 | CG33722-PC | 1..478 | 1..478 | 2484 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22110-PA | 476 | GI22110-PA | 1..476 | 1..477 | 1688 | 68.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23357-PA | 473 | GL23357-PA | 1..473 | 1..478 | 1885 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16075-PA | 473 | GA16075-PA | 1..473 | 1..478 | 1889 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23709-PA | 478 | GM23709-PA | 1..478 | 1..478 | 2492 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18522-PA | 478 | GD18522-PA | 1..478 | 1..478 | 2500 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24227-PA | 477 | GJ24227-PA | 1..477 | 1..477 | 1780 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13175-PA | 480 | GK13175-PA | 1..480 | 1..478 | 1777 | 70.1 | Plus |
Dwil\GK13176-PA | 212 | GK13176-PA | 7..212 | 273..478 | 865 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25856-PA | 478 | GE25856-PA | 1..478 | 1..478 | 2360 | 93.1 | Plus |