BDGP Sequence Production Resources |
Search the DGRC for GM01182
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 11 |
Well: | 82 |
Vector: | pBS SK- |
Associated Gene/Transcript | dgrn-RA |
Protein status: | GM01182.pep: gold |
Preliminary Size: | 1866 |
Sequenced Size: | 1660 |
Gene | Date | Evidence |
---|---|---|
CG10981 | 2001-01-01 | Release 2 assignment |
CG10981 | 2001-10-10 | Blastp of sequenced clone |
CG10981 | 2008-04-29 | Release 5.5 accounting |
CG10981 | 2008-08-15 | Release 5.9 accounting |
CG10981 | 2008-12-18 | 5.12 accounting |
1660 bp (1660 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060824
> GM01182.complete TAATGTCGACATATTTATATACATTTCTTATAATTATTTTGTTATCAAAG AATTTCGCCGAAACGGAAATTTTATTTTTAATAAATTATTGATTTTTATT GAATTACAAGTGTCATTCTAAACAGCATTGTATAATACCGCAAAAATCGA TAGTCGATCTTAAATCCTTGTTCCCGAATGTCCGTAAAGTGTCATCTTTA AAATAACCGAATGGTCGCGTGAAAGGAGGAAACTATTTTGCACATTTCAA TCTGCACTAAAGCACATGTATATCTGGGTTCACCTGCTTTTGTCTTTACT ACGAAATCATTTCACAAGTTTCCTGGTCATTTGTTGCTCGAACAATGTCA GATTCGACTATTTTCCGTTTTAACTCATCCATTCTTGATCAGTCAGCGGA CAGCAACGTATCCAGTTCGAGCTCCAATTCCAGTGTATCCGACTCTTCTG TGGACTCCCATTCATCCATAGAATCCAATTCGGGACACAATACATCCGTG GAATCTCAGTCATCCGCGGAATCTGATTCATCCGCTGATTCCCATTCGTC CTTGGAACGCCCATCCCCAGTGGAGCGTGATTTATCTGTGGAATCAGACT CATCTTCAGCCACCAATACCAGCGAATCTTCAGTCGGAGAAGCTTCAAAC CAACTGCAGTCACCGCAAAGCAATAACCCCTTAAATATGGCTAACTTGTC TGTCTCGACTGAAGATGCTCATTCGCAGATCAGATCACTTACCCAGGATG TGATCCAGATGGAAGCAGAGTTGGATCGCATGAATCGCTACTGCGAGGAA GTTGTGGCACAGATTGACACCTTCGCCACGAGAACCTCAACGCCAACAAC TCGTAGAATTCGCCGCAGAACGAGTCCAGTAGAAGTGATAGATCTGTCCC ATTTGGACCGTGCACCACCTGTTCGATCCGCTCGGAATCGTGATCCCGAT GCTTTCATCGATCTATGCACCCCCGAAGGCCCAAGAAGTCGCACAGTGAA TCTTCACTCCAACGACTCCCTCACCATTCTGCCACGTCGGTCAGCCGAAA ATGACCCGGTAGTGGATCTCGACGTTGCGTCGCCACCAAAACGCGTTAAT CGCGACATTGATGAGTCCCAAAAAGAGGAGTTATACAAGTGCCCCATCTG CATGGACAGTGTATCGAAGCGCGAGCCAGTGTCAACCAAATGTGGACACG TCTTCTGCCGCGAATGCATCGAAACAGCCATCAGAGCTACGCACAAGTGC CCAATATGCAACAAGAAGCTGACCGCACGTCAATTCTTTCGCATTTACTT GTAAGTTGCTTATACTATTTCACATTTTTTGCTCTGTGAGCCTTAATATA ATATAGTTTAAAAAAAAACGCTTAACTATGTTAGAGACGGCAAATAATGT CTGTTCTTGTGATTCAGAAAAAATTAGTTATTTAAGTTGTCCTATGTAAT CAGTGGCGCCCAAAAATATTTGAATACAACTATAAAAACTAAAGACTTCA CTTTTGATGTATGAAACCATCTCAGGCTAGAATAATATAAGAACGACCGA AAGGAGTGTCAAAGTATTATGTAGGCATTTTTCCAAACGCAATTTAACAA TGTAACATACATATAATATAATAAATAAAATGGTCCCAACGCAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1651451..1652222 | 871..1642 | 3860 | 100 | Plus |
chr3R | 27901430 | chr3R | 1650682..1651090 | 372..780 | 2045 | 100 | Plus |
chr3R | 27901430 | chr3R | 1650251..1650621 | 1..371 | 1855 | 100 | Plus |
chr3R | 27901430 | chr3R | 1651145..1651234 | 781..870 | 450 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5825805..5826577 | 871..1643 | 3865 | 100 | Plus |
3R | 32079331 | 3R | 5825036..5825444 | 372..780 | 2045 | 100 | Plus |
3R | 32079331 | 3R | 5824605..5824975 | 1..371 | 1855 | 100 | Plus |
3R | 32079331 | 3R | 5825499..5825588 | 781..870 | 450 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5566636..5567408 | 871..1643 | 3865 | 100 | Plus |
3R | 31820162 | 3R | 5565867..5566275 | 372..780 | 2045 | 100 | Plus |
3R | 31820162 | 3R | 5565436..5565806 | 1..371 | 1855 | 100 | Plus |
3R | 31820162 | 3R | 5566330..5566419 | 781..870 | 450 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
blood | 7410 | blood BLOOD 7410bp | 6882..6992 | 115..1 | 114 | 59.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1650682..1651090 | 372..780 | 100 | -> | Plus |
chr3R | 1651145..1651234 | 781..870 | 100 | -> | Plus |
chr3R | 1651451..1652189 | 871..1609 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10981-RA | 1..960 | 345..1304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10981-RA | 1..960 | 345..1304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgrn-RA | 1..960 | 345..1304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10981-RA | 1..960 | 345..1304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgrn-RA | 1..960 | 345..1304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10981-RA | 1..1642 | 1..1642 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10981-RA | 1..1642 | 1..1642 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgrn-RA | 1..1642 | 1..1642 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10981-RA | 1..1642 | 1..1642 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgrn-RA | 1..1632 | 11..1642 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5824605..5824975 | 1..371 | 100 | -> | Plus |
3R | 5825036..5825444 | 372..780 | 100 | -> | Plus |
3R | 5825499..5825588 | 781..870 | 100 | -> | Plus |
3R | 5825805..5826576 | 871..1642 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5824605..5824975 | 1..371 | 100 | -> | Plus |
3R | 5825036..5825444 | 372..780 | 100 | -> | Plus |
3R | 5825499..5825588 | 781..870 | 100 | -> | Plus |
3R | 5825805..5826576 | 871..1642 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5824605..5824975 | 1..371 | 100 | -> | Plus |
3R | 5825036..5825444 | 372..780 | 100 | -> | Plus |
3R | 5825499..5825588 | 781..870 | 100 | -> | Plus |
3R | 5825805..5826576 | 871..1642 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1650327..1650697 | 1..371 | 100 | -> | Plus |
arm_3R | 1650758..1651166 | 372..780 | 100 | -> | Plus |
arm_3R | 1651221..1651310 | 781..870 | 100 | -> | Plus |
arm_3R | 1651527..1652298 | 871..1642 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5565436..5565806 | 1..371 | 100 | -> | Plus |
3R | 5565867..5566275 | 372..780 | 100 | -> | Plus |
3R | 5566330..5566419 | 781..870 | 100 | -> | Plus |
3R | 5566636..5567407 | 871..1642 | 100 | Plus |
Translation from 344 to 1303
> GM01182.pep MSDSTIFRFNSSILDQSADSNVSSSSSNSSVSDSSVDSHSSIESNSGHNT SVESQSSAESDSSADSHSSLERPSPVERDLSVESDSSSATNTSESSVGEA SNQLQSPQSNNPLNMANLSVSTEDAHSQIRSLTQDVIQMEAELDRMNRYC EEVVAQIDTFATRTSTPTTRRIRRRTSPVEVIDLSHLDRAPPVRSARNRD PDAFIDLCTPEGPRSRTVNLHSNDSLTILPRRSAENDPVVDLDVASPPKR VNRDIDESQKEELYKCPICMDSVSKREPVSTKCGHVFCRECIETAIRATH KCPICNKKLTARQFFRIYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16357-PA | 202 | GF16357-PA | 16..202 | 131..319 | 589 | 60.5 | Plus |
Dana\GF14677-PA | 326 | GF14677-PA | 157..326 | 143..319 | 357 | 45.1 | Plus |
Dana\GF15935-PA | 116 | GF15935-PA | 31..116 | 239..319 | 210 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13065-PA | 320 | GG13065-PA | 51..320 | 70..319 | 920 | 71.1 | Plus |
Dere\GG22477-PA | 94 | GG22477-PA | 22..94 | 245..319 | 199 | 50.7 | Plus |
Dere\GG21725-PA | 192 | GG21725-PA | 114..192 | 234..319 | 180 | 43 | Plus |
Dere\GG23586-PA | 106 | GG23586-PA | 20..105 | 231..318 | 165 | 37.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22295-PA | 202 | GH22295-PA | 84..202 | 166..319 | 271 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dgrn-PA | 319 | CG10981-PA | 1..319 | 1..319 | 1617 | 100 | Plus |
dgrn-PB | 312 | CG10981-PB | 1..312 | 1..319 | 1566 | 97.8 | Plus |
dgrn-PD | 205 | CG10981-PD | 1..205 | 115..319 | 1070 | 100 | Plus |
CG43058-PA | 100 | CG43058-PA | 10..100 | 194..319 | 214 | 35.7 | Plus |
elfless-PC | 229 | CG15150-PC | 42..229 | 156..319 | 183 | 30.7 | Plus |
elfless-PB | 229 | CG15150-PB | 42..229 | 156..319 | 183 | 30.7 | Plus |
CG44271-PA | 106 | CG44271-PA | 55..105 | 264..318 | 157 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21991-PA | 294 | GI21991-PA | 68..294 | 123..319 | 385 | 43.2 | Plus |
Dmoj\GI14783-PA | 374 | GI14783-PA | 319..374 | 264..319 | 222 | 62.5 | Plus |
Dmoj\GI13656-PA | 254 | GI13656-PA | 199..254 | 264..319 | 218 | 58.9 | Plus |
Dmoj\GI15418-PA | 707 | GI15418-PA | 651..707 | 264..319 | 182 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24328-PA | 317 | GL24328-PA | 102..317 | 119..319 | 428 | 48.2 | Plus |
Dper\GL24317-PA | 151 | GL24317-PA | 27..151 | 198..319 | 218 | 42.5 | Plus |
Dper\GL20345-PA | 117 | GL20345-PA | 43..117 | 243..319 | 217 | 53.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10686-PB | 326 | GA10686-PB | 111..326 | 119..319 | 437 | 49.1 | Plus |
Dpse\GA26569-PA | 209 | GA26569-PA | 85..209 | 198..319 | 252 | 43.6 | Plus |
Dpse\GA28705-PA | 209 | GA28705-PA | 85..209 | 198..319 | 242 | 42.9 | Plus |
Dpse\GA28704-PA | 209 | GA28704-PA | 85..209 | 198..319 | 242 | 42.9 | Plus |
Dpse\GA28682-PA | 138 | GA28682-PA | 14..138 | 198..319 | 238 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10845-PA | 329 | GM10845-PA | 1..329 | 1..319 | 1162 | 83.3 | Plus |
Dsec\GM20261-PA | 167 | GM20261-PA | 21..87 | 242..305 | 171 | 47.1 | Plus |
Dsec\GM13869-PA | 91 | GM13869-PA | 5..91 | 231..319 | 158 | 39.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19827-PA | 329 | GD19827-PA | 1..329 | 1..319 | 1165 | 83.3 | Plus |
Dsim\GD25747-PA | 101 | GD25747-PA | 15..101 | 236..319 | 208 | 45.5 | Plus |
Dsim\GD22545-PA | 91 | GD22545-PA | 17..91 | 240..319 | 154 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18825-PA | 288 | GJ18825-PA | 175..288 | 197..319 | 254 | 44.1 | Plus |
Dvir\GJ13990-PA | 303 | GJ13990-PA | 246..303 | 262..319 | 225 | 58.6 | Plus |
Dvir\GJ16377-PA | 273 | GJ16377-PA | 153..273 | 205..319 | 191 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14441-PA | 207 | GK14441-PA | 71..207 | 176..319 | 381 | 53.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10170-PA | 344 | GE10170-PA | 1..344 | 1..319 | 947 | 66.9 | Plus |
Dyak\GE13346-PA | 230 | GE13346-PA | 146..230 | 237..319 | 214 | 44.7 | Plus |
Dyak\GE13114-PA | 239 | GE13114-PA | 171..239 | 247..319 | 181 | 46.6 | Plus |
Dyak\GE18407-PA | 107 | GE18407-PA | 55..106 | 263..318 | 147 | 44.6 | Plus |
Translation from 344 to 1303
> GM01182.hyp MSDSTIFRFNSSILDQSADSNVSSSSSNSSVSDSSVDSHSSIESNSGHNT SVESQSSAESDSSADSHSSLERPSPVERDLSVESDSSSATNTSESSVGEA SNQLQSPQSNNPLNMANLSVSTEDAHSQIRSLTQDVIQMEAELDRMNRYC EEVVAQIDTFATRTSTPTTRRIRRRTSPVEVIDLSHLDRAPPVRSARNRD PDAFIDLCTPEGPRSRTVNLHSNDSLTILPRRSAENDPVVDLDVASPPKR VNRDIDESQKEELYKCPICMDSVSKREPVSTKCGHVFCRECIETAIRATH KCPICNKKLTARQFFRIYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dgrn-PA | 319 | CG10981-PA | 1..319 | 1..319 | 1617 | 100 | Plus |
dgrn-PB | 312 | CG10981-PB | 1..312 | 1..319 | 1566 | 97.8 | Plus |
dgrn-PD | 205 | CG10981-PD | 1..205 | 115..319 | 1070 | 100 | Plus |
CG43058-PA | 100 | CG43058-PA | 10..100 | 194..319 | 214 | 35.7 | Plus |
elfless-PC | 229 | CG15150-PC | 42..229 | 156..319 | 183 | 30.7 | Plus |