BDGP Sequence Production Resources |
Search the DGRC for GM01233
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 12 |
Well: | 33 |
Vector: | pBS SK- |
Associated Gene/Transcript | Int6-RA |
Protein status: | GM01233.pep: gold |
Preliminary Size: | 1715 |
Sequenced Size: | 1590 |
Gene | Date | Evidence |
---|---|---|
CG9677 | 2001-01-01 | Release 2 assignment |
CG9677 | 2002-12-11 | Blastp of sequenced clone |
CG9677 | 2003-01-01 | Sim4 clustering to Release 3 |
Int6 | 2008-04-29 | Release 5.5 accounting |
Int6 | 2008-08-15 | Release 5.9 accounting |
Int6 | 2008-12-18 | 5.12 accounting |
1590 bp (1590 high quality bases) assembled on 2002-12-11
GenBank Submission: AF132551
> GM01233.complete TATTTCCACACTCTGGTAACTCTGAGCGGGCGTCACTCTTTTCGTCTCTG GGCACACTGTCTGCCCTCGCACGCGTATTTTTCTGCCGATTTTGCGTGTA AATTTAATTGTGAAAACATAGTAAAACAGCTGCAATCATGGCCAATTTCG ATCTGACACGCATCAATTGCCAGTTTTTGGACAGGCATTTGACCTTCCCG CTGCTGGAGTTCTTGTGCGGCAAGGAGATCTACAACCAGCAGGAGCTGCT GGAGTACATTTTGGAGACGGTGAACAAGACGAACATGATCGATTACACGA TGGACACCCGCAAGCGTCTCAATCTCAGCCAGGAGATGCCCGAGGAGCTC GTGCAGCGCAAGGCGGAGGTCCTGGCCACGCTTAAGCAGCTGCAGAACGA GGTGGCACCCATCATGAAGGCCACCGACATTCTTAAGAACGGTGAGAGCA TGAAGGACTCGAAGACCTTCGTCAACGCCCTTCAGAAGGACTACAATTTT AAGGTGGAGCACCTGGAGAGCGCCTACAAGCTGGCCAAGTACCTCTACGA GTGCGGCAACTATCAGGAGTCCACCTCTTACCTGTACTTCTGCCTCATCG TCATGTCGCCCAACGACAAGAACTACCTTAATGTGCTGTGGGGCAAGCTG GCCGCCGAGATTCTGACCCTCAACTGGAACACTGCTCTGGAGGATCTGAC GCGTTTGCGCGACTACATTGACAACGCCAACTTCAGCACCATCCAGGCCC TGCAGCAACGCACCTGGCTGATCCACTGGTCGGTCCTGGTCTTCTTCAAT CACCCCAAGGGACGCGATCTCATTATTGAGATGTTCCTGTACAAGCCCCT GTATTTGAACGCCATTCAGACAATGTGTCCGCACATCATGCGTTACTTGG CCACCGCCGTAGTCATCAACCGCACCCGCCGCAATGCTCTAAAGGATTTG ATCAAGGTGATCCAACAGGAGTCGTACACGTACCGCGATCCCATCACCGA GTTTCTGGAGTGTCTGTACGTGAACTTTGATTTCGAGGGAGCGCGTCTGA AGCTGCACGAGTGCCAGACGGTGATCCTCAACGACTTCTTCATCGTGGCC TGCCTGAATGAGTTCGTGGAGGATGCCCGCTTGATGATCTTCGAGACATT CTGCCGCATCCACCAGTGCATCACCATCAGCATGCTGGCCGATAAGCTGA ACATGAAGCCCAACGAGGCTGAGTGCTGGATCGTCAACCTTATCCGCAAT GCCCGTCTGAATGCCAAGATCGATTCGAAACTGGGTCATGTGGTGATGGG CACCCAGCCCTTGAGTCCCTATCAGCAGCTGGTGGAGAAGATCGACTCGC TGTCCATGCGGTCGGAGCATTTGGCAGGTTTGATTGAGCGCAAGAGCAAG CAGAAGCAGAATCAGGAGTCGGCCGACTCCTGGAAGTACTACTAGTTGCT GACTTTTTATCCACAATTAAGTTAAGACTCTTTGTACCCTTTAAAAACCG ATGATTGCGCGCAGTCGAGCGAATAAATTAACATCTTACTCATTCGCTCA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Int6-RA | 1665 | Int6-RA | 88..1633 | 6..1551 | 7715 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16774818..16775748 | 1549..619 | 4655 | 100 | Minus |
chr3L | 24539361 | chr3L | 16775833..16776227 | 620..226 | 1975 | 100 | Minus |
chr3L | 24539361 | chr3L | 16776320..16776543 | 227..4 | 1120 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16785240..16786172 | 1551..619 | 4665 | 100 | Minus |
3L | 28110227 | 3L | 16786257..16786651 | 620..226 | 1975 | 100 | Minus |
3L | 28110227 | 3L | 16786744..16786965 | 227..6 | 1095 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16778340..16779272 | 1551..619 | 4665 | 100 | Minus |
3L | 28103327 | 3L | 16779357..16779751 | 620..226 | 1975 | 100 | Minus |
3L | 28103327 | 3L | 16779844..16780065 | 227..6 | 1095 | 99.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16774818..16775746 | 621..1549 | 100 | <- | Minus |
chr3L | 16775833..16776225 | 228..620 | 100 | <- | Minus |
chr3L | 16776320..16776544 | 1..227 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Int6-RA | 1..1308 | 138..1445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Int6-RA | 1..1308 | 138..1445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Int6-RA | 1..1308 | 138..1445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Int6-RA | 1..1308 | 138..1445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Int6-RA | 1..1308 | 138..1445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Int6-RA | 20..1568 | 1..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Int6-RA | 20..1568 | 1..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Int6-RA | 1..1520 | 30..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Int6-RA | 20..1568 | 1..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Int6-RA | 1..1520 | 30..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16785242..16786170 | 621..1549 | 100 | <- | Minus |
3L | 16786257..16786649 | 228..620 | 100 | <- | Minus |
3L | 16786744..16786967 | 1..227 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16785242..16786170 | 621..1549 | 100 | <- | Minus |
3L | 16786257..16786649 | 228..620 | 100 | <- | Minus |
3L | 16786744..16786967 | 1..227 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16785242..16786170 | 621..1549 | 100 | <- | Minus |
3L | 16786257..16786649 | 228..620 | 100 | <- | Minus |
3L | 16786744..16786967 | 1..227 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16778342..16779270 | 621..1549 | 100 | <- | Minus |
arm_3L | 16779357..16779749 | 228..620 | 100 | <- | Minus |
arm_3L | 16779844..16780067 | 1..227 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16779844..16780067 | 1..227 | 98 | Minus | |
3L | 16778342..16779270 | 621..1549 | 100 | <- | Minus |
3L | 16779357..16779749 | 228..620 | 100 | <- | Minus |
Translation from 137 to 1444
> GM01233.pep MANFDLTRINCQFLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNM IDYTMDTRKRLNLSQEMPEELVQRKAEVLATLKQLQNEVAPIMKATDILK NGESMKDSKTFVNALQKDYNFKVEHLESAYKLAKYLYECGNYQESTSYLY FCLIVMSPNDKNYLNVLWGKLAAEILTLNWNTALEDLTRLRDYIDNANFS TIQALQQRTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQTMCPHI MRYLATAVVINRTRRNALKDLIKVIQQESYTYRDPITEFLECLYVNFDFE GARLKLHECQTVILNDFFIVACLNEFVEDARLMIFETFCRIHQCITISML ADKLNMKPNEAECWIVNLIRNARLNAKIDSKLGHVVMGTQPLSPYQQLVE KIDSLSMRSEHLAGLIERKSKQKQNQESADSWKYY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10503-PA | 434 | GF10503-PA | 1..434 | 1..435 | 2300 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15850-PA | 435 | GG15850-PA | 1..435 | 1..435 | 2331 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15221-PA | 434 | GH15221-PA | 1..434 | 1..435 | 2284 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF3e-PA | 435 | CG9677-PA | 1..435 | 1..435 | 2273 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11931-PA | 434 | GI11931-PA | 1..434 | 1..435 | 2300 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16190-PA | 434 | GL16190-PA | 1..434 | 1..435 | 2295 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21959-PA | 434 | GA21959-PA | 1..434 | 1..435 | 2291 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24367-PA | 304 | GM24367-PA | 10..304 | 141..435 | 1482 | 94.6 | Plus |
Dsec\GM24367-PA | 304 | GM24367-PA | 1..32 | 1..32 | 171 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12442-PA | 435 | GD12442-PA | 1..435 | 1..435 | 2335 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12157-PA | 434 | GJ12157-PA | 1..434 | 1..435 | 2296 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12672-PA | 434 | GK12672-PA | 1..434 | 1..435 | 2285 | 98.2 | Plus |
Dwil\GK22114-PA | 434 | GK22114-PA | 1..434 | 1..435 | 2224 | 94.9 | Plus |
Dwil\GK23369-PA | 370 | GK23369-PA | 1..275 | 1..275 | 1393 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Int6-PA | 435 | GE22189-PA | 1..435 | 1..435 | 2331 | 99.8 | Plus |
Translation from 137 to 1444
> GM01233.hyp MANFDLTRINCQFLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNM IDYTMDTRKRLNLSQEMPEELVQRKAEVLATLKQLQNEVAPIMKATDILK NGESMKDSKTFVNALQKDYNFKVEHLESAYKLAKYLYECGNYQESTSYLY FCLIVMSPNDKNYLNVLWGKLAAEILTLNWNTALEDLTRLRDYIDNANFS TIQALQQRTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQTMCPHI MRYLATAVVINRTRRNALKDLIKVIQQESYTYRDPITEFLECLYVNFDFE GARLKLHECQTVILNDFFIVACLNEFVEDARLMIFETFCRIHQCITISML ADKLNMKPNEAECWIVNLIRNARLNAKIDSKLGHVVMGTQPLSPYQQLVE KIDSLSMRSEHLAGLIERKSKQKQNQESADSWKYY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Int6-PA | 435 | CG9677-PA | 1..435 | 1..435 | 2273 | 100 | Plus |