BDGP Sequence Production Resources |
Search the DGRC for GM01253
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 12 |
Well: | 53 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG31320-RA |
Protein status: | GM01253.pep: gold |
Preliminary Size: | 3431 |
Sequenced Size: | 3424 |
Gene | Date | Evidence |
---|---|---|
CG31320 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31320 | 2003-03-24 | Blastp of sequenced clone |
CG31320 | 2008-04-29 | Release 5.5 accounting |
CG31320 | 2008-08-15 | Release 5.9 accounting |
CG31320 | 2008-12-18 | 5.12 accounting |
3424 bp (3424 high quality bases) assembled on 2003-03-24
GenBank Submission: BT006021
> GM01253.complete TGAAATAAACAAAAATAAATGAGAGAATATAACGAAAACTGTTATCTTTT GTGTAGCCATAGCAACCGGTGTGTTTGACGCTTGAGTAACGTTTAAACAT TCTCGTTTTGCAGCCTAGAAATCTATGAAAAGCAGCTAAACAAAAATCAC ACTCGCGCAGCTTGAGAAACCGGCGAAAAAAAGTATCTTAAAAATTCTGG ATTGGAAGATTGAATGTGGAGAATTCACTGCAACTAATACCTTTACTACG AAAAACAAAAATCCACAACAGCAAATGGCAAAAATATCTAAAACGGAATT TTACATTTAAAAACCACTAAAAAGAAGCTAAGAACTAAGGAAAAAAAAGA TTTCATAAAAGAATCAGAAATCCTTCGCAAGTAAGATACAGTTTTAAAAT TAAGAAGATATTAAATACATATACAGCAGCTCAAAGCAAGAAAAACTGTA ATTATATATTCAATACTACTTTAGCAAGTATGCCTTAAAAAAATATAAAA GTATAAATTCATATTTTCATATTTATTTACGAAATCAATTGCTGAACACT TTGCAATATCTTGATCAATAATTTTCAAAAGAATTATTAAATAAATTCCA AAATGGGCTTCGATATTGATAGCCAGAAGATTTGCTCGGATCTGGAGAGC TCCGATCGACGTCTGAAGACCACAGTTCTGGATGAACTGCTCGATAAGTG CAAAGAAGCAACAAATTCCGAGAGTGCTGACAAAATAGCCGATGTTTTCG ATAAACTGTATCTGCATCTACTGAAATGCTACGAAGATAGATTCGAAAGC GTTCGCTCTAAAGCCATTCAAGTGGTAAGCGCTTTTTTGTCAAGTCTTCC GCCCACGGATTTCCACCTGATGAATGTGGTTTCAACTTTGGCGGAGCGGA TGGGAAAGGCCGAAACCGTGGAGCCCAGCGAGGAAATCCGTCTCCTCTAC ATTGCGCAACTGAATTTGATGATTTGCCTGTATGAGAAAATGGAAAATGT GGGCGTCTTCAGGGAGTGCTATCCCTTGGTGGTGAAGATTCTGATTAAGT CTATCAAGGATGACTATCCGGTGGTGCAGCGCGAAGGATGCTCCGCTGTG GTTACTCTCTCTCGTTTGGCTGATACCCAGGAGTTTCGTCCCTTTACAGA ATCCATTCTGCTACCTCTTTACACAATGTTGAATCACAAGCATGCACAGG CCAGGATATCGGCCATTCAAGCCATCGCCAGGCTGAGTCTACACATGGAC GCCAGTGGCGATGCAATGAGAAGGCTCTTCAATGAGGTGTCGCCCCTACT TATGGACACCATGCCATTGGTTCGCCGTGAAGTCGGTCAGATGGGCATTC TTATGCTAATGGAACTATTGGATCGCTATTCCTTCTTTGAGAGAATTCTA CCGCTGGTTCTTTGTTGCCTAAAAGACGAATCTCCGGAGGTTCTGAACCA CATATACCCGCAATGGCTCAAGTGTGGCATACAATATTTCAATGAAAACG AAGCCGAGTTGTCACAACAGGAAATAAGCGATTTGCCCGTTGAGAATTAC CCGAAAGATGTCAAGCGACCTACGATAGGATGTCGTGGATTGGTGCAACG ATCTTTGCGACTCTTGCAACTTATTACCCGGGAAACAAGCGACTGGAAGG ATAATGTACGCCTCCACGCCCTGAAGCTACTCTATCAATTTGTTTTGCAC GCCGAGGCTGCCATGACTGCCAAGTTCTTTGAGATCTACGGGGATTTGGC CCATGCCTGTATCGATCATGTGGCAGAAGTCAATGCGGAAGCCGCCAAGG TGGCGGATTTGATGGGTCGTCTGTTGTCCTACGATGCCTGGATAGATCAC GGCTTCGATGGCCTGGAACGAAATGCCCGTGAGTCTTATATGAGATGTTT CTACCACATGTTCACCGCCTCCCTCGGTGGCACCTATGAGCAGTTAATGC GCTTGGCCAAGCTTCTTCGCTGCACCGATTACTCGCATACTCTGAAGCCA GGTTTCCAGCATTACATACTCAAACTCTTGAATACCATTGTGGATAAAAC GCTGAAGATCAATGCGGGGCAAAACGAGCTGGAAGATCTCTACGAATCGG TATATGTATGTGCCATTAAAGTAATGGCACTTTCAAGTTCACTCGAAAAT GTCGGAGACGAAGATGTTAATTTCGGTCAAACGCTGATCGAAAAAATGGT CAAACTTCTCAACACTTCGGTTCCTAAAATTCACGAACGTTGGTTTCATT TGGCCTTGCAGGATGTAATAAATCTGGATGCGGCCTTAGAGGATAATGCT GAACCAGTGATGCTGTTGAATGGATTGATAAATATGTGCCACATTCGAGC CACCTATGTGCACGATCTTATCGAGAAAGTTAAGATCGTCTTTCAGCATT GCTGCGATAGTGCTCAAGTTAAAATCTTTAGCAGTCTCTCGTTAGCAACT CTATTTTGGTCGAAAACGATGAATGTAGAACGTGAGTCCAGCACCCAGAT GTTAAGTGAATTCGTATCTCAGATTGTGGAACCCTATCTGACCTGGAAGG CTGGATCCAATGCCGAGGCCATGAGATCCCTGGCCATGGCTACTCTGTGT GCTTTGGCTCAGGGAGCCGAGTCGGAATCTGTGGAAGTACTACCCTCTCT GGCCAAATATATGCCTAGCCTGCTCGAAGATCGCAATGTCACCACACGTC ATTATGCGATCAAGGCGGTTGTATATTTCCGGGAAATGTCTGTGGAAGAT TTGAAGCCACTAGCTTATGCCACCATGCAGCGCATGGATGATCCTTCGGC TGGCATTCGTATCCTGGCTGCTTTGGCGATGGGTAAATTGAAGCCCAAGT TCGCCGAGACGGATACTGAAGAGAATTATGAAAAGGAGGTGTGGGATGCT ATTGTTAAACGCGCCATGGATCTGCTGTTGCTCTATCACGAAAGTCCCGA AAAGGATATGAGGGCAGCTGTAGCCGTTACCCTAAAGGTCTTGGCCAAAT CTCATCCAGAAGCCTGGGAGGAACGCTATCAACGGGCTTTACCTATGGCT CAGAAAAAGGATTTACTCACCGAACTCTATGATAAGCTAACTATCAATGA AGATTCACATACTGAGGTTACGTCAGCATCACAAGATTAGGATACACTTT ACATATTAATTAAAAATGAATTAGATTTATTTTACCAATTTGTGTTGCAA ATTAAGCTTCTTAGTAAACCAATTTAAATTTATATTGAAGATTAACAATT TTATAATCTCTTACAAACTTTAGCTTATATTCGGGTAATTGATTTAATTG ACCTATATACATATATCCACTTCTCAGAACGAAGAACTGTTGTAAACAAA AGCTCCAAACTATAAAGTAAAATCTGCTCAAGCGAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31320-RA | 3384 | CG31320-RA | 1..3384 | 1..3384 | 16920 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 10183169..10186543 | 3384..1 | 16370 | 99.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 14358352..14361739 | 3388..1 | 16940 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 14099183..14102570 | 3388..1 | 16940 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
roo | 9092 | roo DM_ROO 9092bp | 990..1287 | 176..477 | 134 | 54 | Plus |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 6688..6812 | 3129..3250 | 125 | 61.8 | Plus |
Tc3 | 1743 | Tc3 TC3 1743bp | 238..310 | 3201..3128 | 124 | 64.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 10183169..10186543 | 1..3384 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31320-RA | 1..2538 | 603..3140 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31320-RA | 1..2538 | 603..3140 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31320-RA | 1..2538 | 603..3140 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31320-RA | 1..2538 | 603..3140 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31320-RA | 1..2538 | 603..3140 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31320-RA | 1..3384 | 1..3384 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31320-RA | 1..3384 | 1..3384 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31320-RA | 48..3431 | 1..3384 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31320-RA | 1..3384 | 1..3384 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31320-RA | 48..3431 | 1..3384 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14358356..14361739 | 1..3384 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14358356..14361739 | 1..3384 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14358356..14361739 | 1..3384 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 10184078..10187461 | 1..3384 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14099187..14102570 | 1..3384 | 100 | Minus |
Translation from 602 to 3139
> GM01253.pep MGFDIDSQKICSDLESSDRRLKTTVLDELLDKCKEATNSESADKIADVFD KLYLHLLKCYEDRFESVRSKAIQVVSAFLSSLPPTDFHLMNVVSTLAERM GKAETVEPSEEIRLLYIAQLNLMICLYEKMENVGVFRECYPLVVKILIKS IKDDYPVVQREGCSAVVTLSRLADTQEFRPFTESILLPLYTMLNHKHAQA RISAIQAIARLSLHMDASGDAMRRLFNEVSPLLMDTMPLVRREVGQMGIL MLMELLDRYSFFERILPLVLCCLKDESPEVLNHIYPQWLKCGIQYFNENE AELSQQEISDLPVENYPKDVKRPTIGCRGLVQRSLRLLQLITRETSDWKD NVRLHALKLLYQFVLHAEAAMTAKFFEIYGDLAHACIDHVAEVNAEAAKV ADLMGRLLSYDAWIDHGFDGLERNARESYMRCFYHMFTASLGGTYEQLMR LAKLLRCTDYSHTLKPGFQHYILKLLNTIVDKTLKINAGQNELEDLYESV YVCAIKVMALSSSLENVGDEDVNFGQTLIEKMVKLLNTSVPKIHERWFHL ALQDVINLDAALEDNAEPVMLLNGLINMCHIRATYVHDLIEKVKIVFQHC CDSAQVKIFSSLSLATLFWSKTMNVERESSTQMLSEFVSQIVEPYLTWKA GSNAEAMRSLAMATLCALAQGAESESVEVLPSLAKYMPSLLEDRNVTTRH YAIKAVVYFREMSVEDLKPLAYATMQRMDDPSAGIRILAALAMGKLKPKF AETDTEENYEKEVWDAIVKRAMDLLLLYHESPEKDMRAAVAVTLKVLAKS HPEAWEERYQRALPMAQKKDLLTELYDKLTINEDSHTEVTSASQD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17486-PA | 850 | GF17486-PA | 1..846 | 1..845 | 3412 | 75.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21346-PA | 845 | GG21346-PA | 1..845 | 1..845 | 4024 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13696-PA | 836 | GH13696-PA | 1..836 | 1..834 | 2949 | 66.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HEATR2-PA | 845 | CG31320-PA | 1..845 | 1..845 | 4319 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24809-PA | 843 | GI24809-PA | 1..835 | 1..833 | 3097 | 69 | Plus |
Dmoj\GI11254-PA | 300 | GI11254-PA | 1..292 | 544..833 | 1043 | 65.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24019-PA | 845 | GL24019-PA | 12..842 | 6..833 | 3006 | 66.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16178-PA | 855 | GA16178-PA | 12..842 | 6..833 | 3006 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25857-PA | 753 | GM25857-PA | 41..753 | 131..845 | 3639 | 94.5 | Plus |
Dsec\GM25857-PA | 753 | GM25857-PA | 1..171 | 1..178 | 207 | 36.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20426-PA | 652 | GD20426-PA | 1..652 | 192..845 | 3360 | 95.6 | Plus |
Dsim\GD20425-PA | 169 | GD20425-PA | 1..151 | 1..161 | 679 | 84 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24454-PA | 842 | GJ24454-PA | 1..841 | 1..839 | 3110 | 68.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12152-PA | 857 | GK12152-PA | 7..838 | 5..834 | 2925 | 65.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26455-PA | 845 | GE26455-PA | 1..845 | 1..845 | 4039 | 89 | Plus |
Translation from 602 to 3139
> GM01253.hyp MGFDIDSQKICSDLESSDRRLKTTVLDELLDKCKEATNSESADKIADVFD KLYLHLLKCYEDRFESVRSKAIQVVSAFLSSLPPTDFHLMNVVSTLAERM GKAETVEPSEEIRLLYIAQLNLMICLYEKMENVGVFRECYPLVVKILIKS IKDDYPVVQREGCSAVVTLSRLADTQEFRPFTESILLPLYTMLNHKHAQA RISAIQAIARLSLHMDASGDAMRRLFNEVSPLLMDTMPLVRREVGQMGIL MLMELLDRYSFFERILPLVLCCLKDESPEVLNHIYPQWLKCGIQYFNENE AELSQQEISDLPVENYPKDVKRPTIGCRGLVQRSLRLLQLITRETSDWKD NVRLHALKLLYQFVLHAEAAMTAKFFEIYGDLAHACIDHVAEVNAEAAKV ADLMGRLLSYDAWIDHGFDGLERNARESYMRCFYHMFTASLGGTYEQLMR LAKLLRCTDYSHTLKPGFQHYILKLLNTIVDKTLKINAGQNELEDLYESV YVCAIKVMALSSSLENVGDEDVNFGQTLIEKMVKLLNTSVPKIHERWFHL ALQDVINLDAALEDNAEPVMLLNGLINMCHIRATYVHDLIEKVKIVFQHC CDSAQVKIFSSLSLATLFWSKTMNVERESSTQMLSEFVSQIVEPYLTWKA GSNAEAMRSLAMATLCALAQGAESESVEVLPSLAKYMPSLLEDRNVTTRH YAIKAVVYFREMSVEDLKPLAYATMQRMDDPSAGIRILAALAMGKLKPKF AETDTEENYEKEVWDAIVKRAMDLLLLYHESPEKDMRAAVAVTLKVLAKS HPEAWEERYQRALPMAQKKDLLTELYDKLTINEDSHTEVTSASQD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31320-PA | 845 | CG31320-PA | 1..845 | 1..845 | 4319 | 100 | Plus |