BDGP Sequence Production Resources |
Search the DGRC for GM01339
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 13 |
Well: | 39 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG4045-RA |
Protein status: | GM01339.pep: gold |
Preliminary Size: | 1085 |
Sequenced Size: | 906 |
Gene | Date | Evidence |
---|---|---|
CG4045 | 2002-03-19 | Blastp of sequenced clone |
CG4045 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4045 | 2008-04-29 | Release 5.5 accounting |
CG4045 | 2008-08-15 | Release 5.9 accounting |
CG4045 | 2008-12-18 | 5.12 accounting |
906 bp (906 high quality bases) assembled on 2002-03-19
GenBank Submission: AY094742
> GM01339.complete CCTCGTCGGTGCCTGATATCACTCGCTTCTGCTAATTTCTAGTAATGGTG GCCACCGGTGGACAGGCTCAGGATCAGGGCCAGAACCAGGAGCCGGATGT GCTAAACCCCACGTCGGCGGTGACGGGGTTGCCACAAAAGCGCTACTACC GCCAGCGTGCGCACTCGAATCCCATTGCGGACCACAGCTTCGACTATCCT GCTCGCCCGGAAGATGTGGACTGGCGCTCCATGTACCCAGGCATTCAGCA GGGCCAGCAGGTAAGTTTTGCGGACATAGGCTGCGGCTATGGCGGCTTTC TCGTCACCCTGGGGGAGATGTTCCCCGAGAAGCTGTCCATCGGCATGGAA ATCCGCGTCAAGGTGTCGGACTACGTGGTGGACCGGATTGCGGCACTGCG TCGACGATGCGCGGATACGGGTGCATACCAGAACATTGCCTGCTTACGCA CCAACGCCATGAAGTATCTGCCCAACTACTTCGTAAAGGGCCAGCTGGAG AAGATGTTCTTCCTCTACCCGGACCCACATTTCAAGCGCGCCAAGCACAA GTGGCGTATTATCAACCAGGCTCTACTCTCCGAATATGCCTATATCCTCA GGAAGGGGGGTCTGTTGTACACCATGACGGACGTTGAGGACTTGCACAAG TGGATAGTGACACATATGGAGGAGCATCCGCTGTACGAGCGTCTTACCGA AGAGGAGGCCAATGCTGATCCCATCACCCCGAAGCTGTACCAAAGCAGCG AGGAGGGCGCTAAGGTGGTTCGAAACAAGGGCGATCATTTTCTGGCCATT TTCCGGCGCCTTTAGGACACGTATATTCTCTATATATGTAGACATTAATT TAAGGTTTCCTTAGAGTAAAGAGATCTATCGATTGTTAAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1969120..1969532 | 609..197 | 2065 | 100 | Minus |
chrX | 22417052 | chrX | 1969583..1969778 | 196..1 | 980 | 100 | Minus |
chrX | 22417052 | chrX | 1968709..1968885 | 887..711 | 885 | 100 | Minus |
chrX | 22417052 | chrX | 1968952..1969054 | 710..608 | 485 | 98.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 2075206..2075618 | 609..197 | 2065 | 100 | Minus |
X | 23542271 | X | 2075669..2075864 | 196..1 | 980 | 100 | Minus |
X | 23542271 | X | 2074792..2074971 | 890..711 | 900 | 100 | Minus |
X | 23542271 | X | 2075038..2075140 | 710..608 | 515 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 2083304..2083716 | 609..197 | 2065 | 100 | Minus |
X | 23527363 | X | 2083767..2083962 | 196..1 | 980 | 100 | Minus |
X | 23527363 | X | 2082890..2083069 | 890..711 | 900 | 100 | Minus |
X | 23527363 | X | 2083136..2083238 | 710..608 | 515 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1968709..1968885 | 711..887 | 100 | <- | Minus |
chrX | 1968952..1969053 | 609..710 | 98 | <- | Minus |
chrX | 1969121..1969532 | 197..608 | 100 | <- | Minus |
chrX | 1969583..1969778 | 1..196 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4045-RA | 1..771 | 45..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4045-RA | 1..771 | 45..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4045-RA | 1..771 | 45..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4045-RA | 1..771 | 45..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4045-RA | 1..771 | 45..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4045-RA | 37..923 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4045-RA | 37..923 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4045-RA | 37..923 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4045-RA | 1..884 | 1..884 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4045-RA | 37..923 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2074795..2074971 | 711..887 | 100 | <- | Minus |
X | 2075038..2075139 | 609..710 | 100 | <- | Minus |
X | 2075207..2075618 | 197..608 | 100 | <- | Minus |
X | 2075669..2075864 | 1..196 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2074795..2074971 | 711..887 | 100 | <- | Minus |
X | 2075038..2075139 | 609..710 | 100 | <- | Minus |
X | 2075207..2075618 | 197..608 | 100 | <- | Minus |
X | 2075669..2075864 | 1..196 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2074795..2074971 | 711..887 | 100 | <- | Minus |
X | 2075038..2075139 | 609..710 | 100 | <- | Minus |
X | 2075207..2075618 | 197..608 | 100 | <- | Minus |
X | 2075669..2075864 | 1..196 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1969240..1969651 | 197..608 | 100 | <- | Minus |
arm_X | 1968828..1969004 | 711..887 | 100 | <- | Minus |
arm_X | 1969071..1969172 | 609..710 | 100 | <- | Minus |
arm_X | 1969702..1969897 | 1..196 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2083305..2083716 | 197..608 | 100 | <- | Minus |
X | 2083767..2083962 | 1..196 | 100 | Minus | |
X | 2082893..2083069 | 711..887 | 100 | <- | Minus |
X | 2083136..2083237 | 609..710 | 100 | <- | Minus |
Translation from 44 to 814
> GM01339.hyp MVATGGQAQDQGQNQEPDVLNPTSAVTGLPQKRYYRQRAHSNPIADHSFD YPARPEDVDWRSMYPGIQQGQQVSFADIGCGYGGFLVTLGEMFPEKLSIG MEIRVKVSDYVVDRIAALRRRCADTGAYQNIACLRTNAMKYLPNYFVKGQ LEKMFFLYPDPHFKRAKHKWRIINQALLSEYAYILRKGGLLYTMTDVEDL HKWIVTHMEEHPLYERLTEEEANADPITPKLYQSSEEGAKVVRNKGDHFL AIFRRL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4045-PA | 256 | CG4045-PA | 1..256 | 1..256 | 1365 | 100 | Plus |
Translation from 44 to 814
> GM01339.pep MVATGGQAQDQGQNQEPDVLNPTSAVTGLPQKRYYRQRAHSNPIADHSFD YPARPEDVDWRSMYPGIQQGQQVSFADIGCGYGGFLVTLGEMFPEKLSIG MEIRVKVSDYVVDRIAALRRRCADTGAYQNIACLRTNAMKYLPNYFVKGQ LEKMFFLYPDPHFKRAKHKWRIINQALLSEYAYILRKGGLLYTMTDVEDL HKWIVTHMEEHPLYERLTEEEANADPITPKLYQSSEEGAKVVRNKGDHFL AIFRRL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21935-PA | 257 | GF21935-PA | 8..257 | 7..256 | 1161 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12652-PA | 256 | GG12652-PA | 1..256 | 1..256 | 1352 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24451-PA | 247 | GH24451-PA | 6..247 | 15..256 | 1151 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4045-PA | 256 | CG4045-PA | 1..256 | 1..256 | 1365 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21651-PA | 248 | GI21651-PA | 3..248 | 12..256 | 1130 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18335-PA | 247 | GL18335-PA | 7..247 | 16..256 | 1181 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17913-PA | 247 | GA17913-PA | 7..247 | 16..256 | 1183 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18921-PA | 256 | GM18921-PA | 1..256 | 1..256 | 1369 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16394-PA | 256 | GD16394-PA | 1..256 | 1..256 | 1362 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16889-PA | 247 | GJ16889-PA | 4..247 | 13..256 | 1168 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16167-PA | 251 | GK16167-PA | 1..251 | 1..256 | 1121 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16980-PA | 256 | GE16980-PA | 1..256 | 1..256 | 1328 | 94.9 | Plus |