BDGP Sequence Production Resources |
Search the DGRC for GM01939
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 19 |
Well: | 39 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG9992-RA |
Protein status: | GM01939.pep: gold |
Preliminary Size: | 1649 |
Sequenced Size: | 1586 |
Gene | Date | Evidence |
---|---|---|
CG9992 | 2001-01-01 | Release 2 assignment |
CG9992 | 2001-10-10 | Blastp of sequenced clone |
CG9992 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9992 | 2008-04-29 | Release 5.5 accounting |
CG9992 | 2008-08-15 | Release 5.9 accounting |
CG9992 | 2008-12-18 | 5.12 accounting |
1586 bp (1586 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060837
> GM01939.complete ATGAGCTCGGGTCCTTAAACAAATAAAGTAATGTAACGTGAAGTTATAGA TCCCCTTCCAATTGCGGCGATAAGTTCCCACGGTGTTAACATAACAAAGA CAACACTCAAAGAAATTCGTCGACTTTCTAACTGTGAATCTCAAACCATA TCACGGCTTATATGTACATATATTGAAGTCCACATACGATAGTATATATA CGTATATATTTACTTGGCTTACACAAATGCTTTATTTGCACAAAACCTTG TGATATTGAGGTCAATATCTGAGGAGAAAAGTATACGATTTTCAGATGGC TTCCAACTCAACGAAGAAAAGCAAACCGAGCGGTATGCGCATATTGTGGA TACCGGGCCGAAAGTCCCATTCCAAGGGTCGTTTTAATGCCACCAACAAG CATATCTCGTACTCGGGTCCACAGAAAAAGAGCGAAGTATGGTCCTTGGG CGGCAGCAAGGCTCAGGCCGAGCTGATTGATTTTCCCTCCACCGATTTGT CTGCCAACTCACCATCATCGTCGCTGAGCATTGTGGCCACCTGTTCGCTG GTTCAAGGATGCGCAAACAGCGATAGAGCATCCTCTGAGGACTTGGCCAT CGTTTCGGAGACTGCCACACTGCCGACTACGCCTGTGAGCCCGAACTCAC CGATCCCGTATAGTCCTACTTCCGAGACTGCAACCGCATCCACGCGAGCC ATGACTTCGCCCAGCGTGATCACCACCGTTGTAATACAGGACTTGCACAA CTTTGTAAGCCCCGAGGATTTGCCGAAGGTGCCAAGTTTTCCAGCAGCAC AGGACACCGATGTGGTGCTAAATAGCTCTGCGGGAACCACAGCATCGATA GCAACCGATTCTTCGCCACTGGCTAATCATAAGCCGGGCTCGTCGCCGCC CGCATCACATTCCCAGCAAACAACGCCACAGAAAAGTAGATATAAGAACC ACAACAACAATCAGGAGGATATCAATTCGATCGAAACCATTTCCAGTTTA ACCAGGTTTCAGGGAAACGCCACAGACTTCGATTGGATCGACGAAATGGT GGGACAGCGAAACACCAACGAACTGATACATGCGAATAAGCGAAAGATGT CCAAAAAGGTGGAGGGCCTGGCCGCCGACCAGTTGGATGCCAAATCGTTA GGCTATGACAATGACAAGGCCAAATTGAATCGCAAGGAGTACGATGACAA CGATGAGAAAGTCGTTAAATGCTTGTACTACTCACTGATGTGCTGCGACT GTACTATATCTTAAATGGATCGCATCTTAAATACGGATCCGCGTCCATGT AATATACCTCTCAGCCAACTATGTAAAAATATATATATTCGATTTTGTAT ACTTAGCGTACGCAGCTAAATAGGACAGAAGAAGACATAAGTATTAACGA ATTTCTAATGATTTACAAGGAAAAACTAACATTATGAAAATTCTGAAATC CAAAACTACATGGCTACAATAATTTGGCTTGAATATTGAAATAAGTGATC GAAACACATATATATTTAAATATGTAGATATTTTCTATTTTTGTAAATAA AACATTTTCTACCAACCGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9992-RD | 1605 | CG9992-RD | 35..1605 | 1..1571 | 7855 | 100 | Plus |
CG9992-RA | 1627 | CG9992-RA | 350..1627 | 294..1571 | 6390 | 100 | Plus |
CG9992-RB | 1439 | CG9992-RB | 352..1439 | 484..1571 | 5440 | 100 | Plus |
CG9992-RB | 1439 | CG9992-RB | 71..352 | 1..282 | 1410 | 100 | Plus |
CG9992-RA | 1627 | CG9992-RA | 71..351 | 1..281 | 1405 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 16271661..16272272 | 1568..957 | 3045 | 99.8 | Minus |
chrX | 22417052 | chrX | 16274295..16274575 | 281..1 | 1405 | 100 | Minus |
chrX | 22417052 | chrX | 16272613..16272874 | 745..484 | 1310 | 100 | Minus |
chrX | 22417052 | chrX | 16272331..16272551 | 965..745 | 1105 | 100 | Minus |
chrX | 22417052 | chrX | 16273031..16273234 | 483..280 | 1020 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 16381951..16382565 | 1571..957 | 3060 | 99.8 | Minus |
X | 23542271 | X | 16384588..16384868 | 281..1 | 1405 | 100 | Minus |
X | 23542271 | X | 16382906..16383167 | 745..484 | 1310 | 100 | Minus |
X | 23542271 | X | 16382624..16382844 | 965..745 | 1105 | 100 | Minus |
X | 23542271 | X | 16383324..16383527 | 483..280 | 1020 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 16390049..16390663 | 1571..957 | 3060 | 99.8 | Minus |
X | 23527363 | X | 16392686..16392966 | 281..1 | 1405 | 100 | Minus |
X | 23527363 | X | 16391004..16391265 | 745..484 | 1310 | 100 | Minus |
X | 23527363 | X | 16390722..16390942 | 965..745 | 1105 | 100 | Minus |
X | 23527363 | X | 16391422..16391625 | 483..280 | 1020 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 2596..2684 | 899..989 | 116 | 64.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16271661..16272264 | 965..1568 | 100 | <- | Minus |
chrX | 16272332..16272550 | 746..964 | 100 | <- | Minus |
chrX | 16272613..16272874 | 484..745 | 100 | <- | Minus |
chrX | 16273031..16273232 | 282..483 | 100 | <- | Minus |
chrX | 16274295..16274575 | 1..281 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9992-RE | 1..969 | 296..1264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9992-RE | 1..969 | 296..1264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9992-RD | 1..969 | 296..1264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9992-RE | 1..969 | 296..1264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9992-RD | 1..969 | 296..1264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9992-RD | 1..1568 | 1..1568 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9992-RD | 1..1568 | 1..1568 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9992-RD | 41..1608 | 1..1568 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9992-RD | 1..1568 | 1..1568 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9992-RD | 41..1608 | 1..1568 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16381954..16382557 | 965..1568 | 100 | <- | Minus |
X | 16382625..16382843 | 746..964 | 100 | <- | Minus |
X | 16382906..16383167 | 484..745 | 100 | <- | Minus |
X | 16383324..16383525 | 282..483 | 100 | <- | Minus |
X | 16384588..16384868 | 1..281 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16381954..16382557 | 965..1568 | 100 | <- | Minus |
X | 16382625..16382843 | 746..964 | 100 | <- | Minus |
X | 16382906..16383167 | 484..745 | 100 | <- | Minus |
X | 16383324..16383525 | 282..483 | 100 | <- | Minus |
X | 16384588..16384868 | 1..281 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16381954..16382557 | 965..1568 | 100 | <- | Minus |
X | 16382625..16382843 | 746..964 | 100 | <- | Minus |
X | 16382906..16383167 | 484..745 | 100 | <- | Minus |
X | 16383324..16383525 | 282..483 | 100 | <- | Minus |
X | 16384588..16384868 | 1..281 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16276658..16276876 | 746..964 | 100 | <- | Minus |
arm_X | 16275987..16276590 | 965..1568 | 100 | <- | Minus |
arm_X | 16276939..16277200 | 484..745 | 100 | <- | Minus |
arm_X | 16277357..16277558 | 282..483 | 100 | <- | Minus |
arm_X | 16278621..16278901 | 1..281 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16391422..16391623 | 282..483 | 100 | <- | Minus |
X | 16391004..16391265 | 484..745 | 100 | <- | Minus |
X | 16390052..16390655 | 965..1568 | 100 | <- | Minus |
X | 16390723..16390941 | 746..964 | 100 | <- | Minus |
X | 16392686..16392966 | 1..281 | 100 | Minus |
Translation from 295 to 1263
> GM01939.pep MASNSTKKSKPSGMRILWIPGRKSHSKGRFNATNKHISYSGPQKKSEVWS LGGSKAQAELIDFPSTDLSANSPSSSLSIVATCSLVQGCANSDRASSEDL AIVSETATLPTTPVSPNSPIPYSPTSETATASTRAMTSPSVITTVVIQDL HNFVSPEDLPKVPSFPAAQDTDVVLNSSAGTTASIATDSSPLANHKPGSS PPASHSQQTTPQKSRYKNHNNNQEDINSIETISSLTRFQGNATDFDWIDE MVGQRNTNELIHANKRKMSKKVEGLAADQLDAKSLGYDNDKAKLNRKEYD DNDEKVVKCLYYSLMCCDCTIS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19571-PA | 320 | GF19571-PA | 1..320 | 1..322 | 939 | 68.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19327-PA | 322 | GG19327-PA | 1..322 | 1..322 | 1381 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12032-PA | 319 | GH12032-PA | 12..319 | 13..322 | 783 | 57.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9992-PC | 322 | CG9992-PC | 1..322 | 1..322 | 1663 | 100 | Plus |
CG9992-PE | 322 | CG9992-PE | 1..322 | 1..322 | 1663 | 100 | Plus |
CG9992-PD | 322 | CG9992-PD | 1..322 | 1..322 | 1663 | 100 | Plus |
CG9992-PA | 322 | CG9992-PA | 1..322 | 1..322 | 1663 | 100 | Plus |
CG9992-PB | 187 | CG9992-PB | 1..187 | 136..322 | 978 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14306-PA | 327 | GI14306-PA | 1..327 | 1..322 | 815 | 57.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15891-PA | 64 | GL15891-PA | 1..64 | 1..63 | 235 | 78.1 | Plus |
Dper\GL15892-PA | 56 | GL15892-PA | 8..56 | 270..322 | 139 | 54.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22172-PA | 324 | GA22172-PA | 1..324 | 1..322 | 943 | 65.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13405-PA | 322 | GM13405-PA | 1..322 | 1..322 | 1509 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15752-PA | 518 | GD15752-PA | 1..244 | 1..244 | 1162 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19363-PA | 325 | GJ19363-PA | 1..325 | 1..322 | 818 | 58.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10061-PA | 344 | GK10061-PA | 1..344 | 1..322 | 751 | 56.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15973-PA | 322 | GE15973-PA | 1..322 | 1..322 | 1399 | 90.4 | Plus |
Translation from 295 to 1263
> GM01939.hyp MASNSTKKSKPSGMRILWIPGRKSHSKGRFNATNKHISYSGPQKKSEVWS LGGSKAQAELIDFPSTDLSANSPSSSLSIVATCSLVQGCANSDRASSEDL AIVSETATLPTTPVSPNSPIPYSPTSETATASTRAMTSPSVITTVVIQDL HNFVSPEDLPKVPSFPAAQDTDVVLNSSAGTTASIATDSSPLANHKPGSS PPASHSQQTTPQKSRYKNHNNNQEDINSIETISSLTRFQGNATDFDWIDE MVGQRNTNELIHANKRKMSKKVEGLAADQLDAKSLGYDNDKAKLNRKEYD DNDEKVVKCLYYSLMCCDCTIS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9992-PC | 322 | CG9992-PC | 1..322 | 1..322 | 1663 | 100 | Plus |
CG9992-PE | 322 | CG9992-PE | 1..322 | 1..322 | 1663 | 100 | Plus |
CG9992-PD | 322 | CG9992-PD | 1..322 | 1..322 | 1663 | 100 | Plus |
CG9992-PA | 322 | CG9992-PA | 1..322 | 1..322 | 1663 | 100 | Plus |
CG9992-PB | 187 | CG9992-PB | 1..187 | 136..322 | 978 | 100 | Plus |