BDGP Sequence Production Resources |
Search the DGRC for GM02062
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 20 |
Well: | 62 |
Vector: | pBS SK- |
Associated Gene/Transcript | ND23-RA |
Protein status: | GM02062.pep: gold |
Preliminary Size: | 963 |
Sequenced Size: | 793 |
Gene | Date | Evidence |
---|---|---|
CG3944 | 2001-01-01 | Release 2 assignment |
CG3944 | 2001-10-10 | Blastp of sequenced clone |
CG3944 | 2003-01-01 | Sim4 clustering to Release 3 |
ND23 | 2008-04-29 | Release 5.5 accounting |
ND23 | 2008-08-15 | Release 5.9 accounting |
ND23 | 2008-12-18 | 5.12 accounting |
793 bp (793 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060840
> GM02062.complete AAACAACTTCTTTGGCAATTTTAGTTTAATTTGGTCGCAAAAATGTCGCT AACTATGCGAATTTTCACCGCATCGCGCAACGGACAGCGCCTGTTTGGCA GCCATGGAGCCCGGCTGCTGGCCGCCCAGCGAGCAGAACCCAAAGATATC GTCGAGGTTCCCAAGGGCTATGTGTATGTAAACAACAAGGAACTGAGCAT GGAGTTTGCCGACATCACGGACCGTGCTGCATCCACCATGTTCTTCGGTG AACTCTTACGTGGATTTGCCGTCACCCTGGCGCACATCTTCAAGGAACCG GCCACTATCAACTATCCCTTTGAAAAGGGACCACTGAGCCCGCGATTCCG CGGAGAACATGCCCTTCGTCGTTATCCCAGTGGAGAGGAGCGCTGCATCG CTTGCAAGCTATGCGAGGCTATTTGCCCCGCACAGGCGATCACCATCGAA GCGGAGGAGCGCGCGGATGGCAGCAGACGTACCACACGCTACGATATCGA CATGACCAAGTGCATCTACTGCGGATTCTGTCAGGAAGCCTGTCCCGTGG ACGCCATCGTCGAGGGACCCAACTTCGAGTTCTCCACGGAGACGCACGAG GAGCTGCTGTACAACAAGGAGAAGCTTCTCTGCAACGGCGACAAGTGGGA GTCCGAGATTGCCTCTAACTTGCAGGCCGACCATCTCTATCGTTAAAGTT GCTTGTACCCCTAGAATTCCTTGTTTAGAACGATTTTCCAATTAAAGATC GTTGCTGTGGCTTCGTCTTAAGCGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 11660963..11661416 | 535..82 | 2240 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 11660656..11660897 | 774..533 | 1195 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 11661598..11661680 | 83..1 | 415 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15836354..15836807 | 535..82 | 2270 | 100 | Minus |
3R | 32079331 | 3R | 15836044..15836288 | 777..533 | 1225 | 100 | Minus |
3R | 32079331 | 3R | 15836989..15837071 | 83..1 | 415 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 15577185..15577638 | 535..82 | 2270 | 100 | Minus |
3R | 31820162 | 3R | 15576875..15577119 | 777..533 | 1225 | 100 | Minus |
3R | 31820162 | 3R | 15577820..15577902 | 83..1 | 415 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11660656..11660895 | 535..774 | 99 | <- | Minus |
chr3R | 11660964..11661415 | 83..534 | 99 | <- | Minus |
chr3R | 11661599..11661680 | 1..82 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ND23-RA | 1..654 | 43..696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ND23-RA | 1..654 | 43..696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ND23-RA | 1..654 | 43..696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ND23-RA | 1..654 | 43..696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ND23-RA | 1..654 | 43..696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ND23-RA | 27..800 | 1..774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ND23-RA | 27..799 | 1..773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ND23-RA | 47..819 | 1..773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ND23-RA | 27..800 | 1..774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ND23-RA | 47..819 | 1..773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15836047..15836286 | 535..774 | 100 | <- | Minus |
3R | 15836355..15836806 | 83..534 | 100 | <- | Minus |
3R | 15836990..15837071 | 1..82 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15836047..15836286 | 535..774 | 100 | <- | Minus |
3R | 15836355..15836806 | 83..534 | 100 | <- | Minus |
3R | 15836990..15837071 | 1..82 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15836047..15836286 | 535..774 | 100 | <- | Minus |
3R | 15836355..15836806 | 83..534 | 100 | <- | Minus |
3R | 15836990..15837071 | 1..82 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11661769..11662008 | 535..774 | 100 | <- | Minus |
arm_3R | 11662077..11662528 | 83..534 | 100 | <- | Minus |
arm_3R | 11662712..11662793 | 1..82 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15576878..15577117 | 535..774 | 100 | <- | Minus |
3R | 15577186..15577637 | 83..534 | 100 | <- | Minus |
3R | 15577821..15577902 | 1..82 | 100 | Minus |
Translation from 42 to 695
> GM02062.hyp MSLTMRIFTASRNGQRLFGSHGARLLAAQRAEPKDIVEVPKGYVYVNNKE LSMEFADITDRAASTMFFGELLRGFAVTLAHIFKEPATINYPFEKGPLSP RFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERADGSRRTTRY DIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLCNGD KWESEIASNLQADHLYR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ND23-PA | 217 | CG3944-PA | 1..217 | 1..217 | 1150 | 100 | Plus |
Translation from 42 to 695
> GM02062.pep MSLTMRIFTASRNGQRLFGSHGARLLAAQRAEPKDIVEVPKGYVYVNNKE LSMEFADITDRAASTMFFGELLRGFAVTLAHIFKEPATINYPFEKGPLSP RFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERADGSRRTTRY DIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLCNGD KWESEIASNLQADHLYR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16476-PA | 217 | GF16476-PA | 1..217 | 1..217 | 1133 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20344-PA | 217 | GG20344-PA | 1..217 | 1..217 | 1156 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18285-PA | 217 | GH18285-PA | 1..217 | 1..217 | 1121 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ND-23-PA | 217 | CG3944-PA | 1..217 | 1..217 | 1150 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24093-PA | 216 | GI24093-PA | 1..216 | 1..217 | 1074 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21733-PA | 217 | GL21733-PA | 1..217 | 1..217 | 1101 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17794-PA | 217 | GA17794-PA | 1..217 | 1..217 | 1101 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25751-PA | 217 | GM25751-PA | 1..217 | 1..217 | 1160 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20325-PA | 217 | GD20325-PA | 1..217 | 1..217 | 1157 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10912-PA | 217 | GJ10912-PA | 1..217 | 1..217 | 1117 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14477-PA | 217 | GK14477-PA | 1..217 | 1..217 | 1115 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26357-PA | 217 | GE26357-PA | 1..217 | 1..217 | 1156 | 98.6 | Plus |