![]() | BDGP Sequence Production Resources |
Search the DGRC for GM02242
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 22 |
Well: | 42 |
Vector: | pBS SK- |
Associated Gene/Transcript | RpL17-RA |
Protein status: | GM02242.pep: gold |
Preliminary Size: | 1029 |
Sequenced Size: | 885 |
Gene | Date | Evidence |
---|---|---|
CG3203 | 2001-01-01 | Release 2 assignment |
CG3203 | 2001-10-10 | Blastp of sequenced clone |
CG14440 | 2003-01-01 | Sim4 clustering to Release 3 |
RpL17 | 2008-04-29 | Release 5.5 accounting |
RpL17 | 2008-08-15 | Release 5.9 accounting |
RpL17 | 2008-12-18 | 5.12 accounting |
885 bp (885 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060845
> GM02242.complete CGTTTCCGGTGAGTGCATGTGCCTAGAAAGTTATTTTCCGAAAATTGCCA CTTAAATCGTATTCAAACTCATTTATTTGTAGCCAAGGCACTGTGGTACG TTTGCGGTCGTGTTAATGGTGTTTGCGGCGCAATTCTGGCTGGTGGAAAT CAACACGTCGAATTGGCCGGCCAGAAAATGCGCTGACACCAAACCAATTC ATTTTTTTTCTTACATATTTTTTTTACTGTGGGCCTGCGGGTCAAAACTG AAAGATATTGAAAAATGGGCCGTTACTCACGCGAGTCAGACAACGTGGCC AAGTCGTGCAAGGCGCGCGGGCCCAATCTACGTGTGCACTTCAAGAACAC ACATGAGACCGCCCAGGCCATCAAGCGCATGCCCCTGCGCCGTGCCCAGC GTTACCTGAAGGCCGTCATCGACCAGAAGGAGTGCGTGCCCTTCCGTCGC TTCAACGGAGGAGTCGGTCGTTGTGCCCAGGCCAAGCAGTGGAAGACCAC GCAGGGTCGCTGGCCCAAGAAGTCCGCCGAGTTCCTGTTGCAGCTGCTGC GCAACGCCGAGGCCAACGCTGATTGCAAGGGTCTGGATGCCGACCGCCTG GTCGTCCACCACATTCAGGTGAACCGCGCTCAGTGCCTGCGTCGCCGCAC GTACCGTGCCCATGGTCGCATCAATCCCTACATGTCGTCGCCATGCCACG TCGAGGTCATCCTCACCGAGAAGGAGGAGCTTGTCTCCAAGGCCACTGAT GACGAGCCCGCCAAGAAGAAGCTCTCCAAGAAGAAGCTGCAGCGCCAAAA GGAGAAGATGTTGCGTTCTGAATAAAATGTGTTCTGGGCCAGCCGCCCAA GCCGGTGACAACTACTGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL17-RD | 1065 | RpL17-RD | 1..869 | 1..869 | 4330 | 99.8 | Plus |
RpL17-RC | 1039 | RpL17-RC | 185..800 | 254..869 | 3065 | 99.8 | Plus |
RpL17-RA | 880 | RpL17-RA | 70..684 | 255..869 | 3060 | 99.8 | Plus |
RpL17-RC | 1039 | RpL17-RC | 91..185 | 1..95 | 475 | 100 | Plus |
RpL17-RA | 880 | RpL17-RA | 12..78 | 1..67 | 305 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6633870..6634393 | 867..344 | 2620 | 100 | Minus |
chrX | 22417052 | chrX | 6636086..6636339 | 254..1 | 1270 | 100 | Minus |
chrX | 22417052 | chrX | 6635192..6635284 | 345..253 | 465 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6633870..6634391 | 346..867 | 100 | <- | Minus |
chrX | 6635192..6635282 | 255..345 | 100 | <- | Minus |
chrX | 6636086..6636339 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL17-RD | 1..561 | 265..825 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL17-RD | 1..561 | 265..825 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL17-RC | 1..561 | 265..825 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL17-RD | 1..561 | 265..825 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL17-RD | 1..561 | 265..825 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL17-RD | 1..867 | 1..867 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL17-RD | 1..867 | 1..867 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL17-RD | 36..902 | 1..867 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL17-RD | 1..867 | 1..867 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL17-RD | 36..902 | 1..867 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6741735..6742256 | 346..867 | 99 | <- | Minus |
X | 6743058..6743148 | 255..345 | 100 | <- | Minus |
X | 6743950..6744203 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6741735..6742256 | 346..867 | 99 | <- | Minus |
X | 6743058..6743148 | 255..345 | 100 | <- | Minus |
X | 6743950..6744203 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6741735..6742256 | 346..867 | 99 | <- | Minus |
X | 6743058..6743148 | 255..345 | 100 | <- | Minus |
X | 6743950..6744203 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6635768..6636289 | 346..867 | 99 | <- | Minus |
arm_X | 6637091..6637181 | 255..345 | 100 | <- | Minus |
arm_X | 6637983..6638236 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6749833..6750354 | 346..867 | 99 | <- | Minus |
X | 6751156..6751246 | 255..345 | 100 | <- | Minus |
X | 6752048..6752301 | 1..254 | 100 | Minus |
Translation from 264 to 824
> GM02242.hyp MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKA VIDQKECVPFRRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEA NADCKGLDADRLVVHHIQVNRAQCLRRRTYRAHGRINPYMSSPCHVEVIL TEKEELVSKATDDEPAKKKLSKKKLQRQKEKMLRSE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL17-PE | 186 | CG3203-PE | 1..186 | 1..186 | 976 | 100 | Plus |
RpL17-PA | 186 | CG3203-PA | 1..186 | 1..186 | 976 | 100 | Plus |
RpL17-PD | 186 | CG3203-PD | 1..186 | 1..186 | 976 | 100 | Plus |
RpL17-PC | 186 | CG3203-PC | 1..186 | 1..186 | 976 | 100 | Plus |
RpL17-PB | 186 | CG3203-PB | 1..186 | 1..186 | 976 | 100 | Plus |
Translation from 264 to 824
> GM02242.pep MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKA VIDQKECVPFRRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEA NADCKGLDADRLVVHHIQVNRAQCLRRRTYRAHGRINPYMSSPCHVEVIL TEKEELVSKATDDEPAKKKLSKKKLQRQKEKMLRSE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21427-PA | 186 | GF21427-PA | 1..186 | 1..186 | 977 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17658-PA | 186 | GG17658-PA | 1..186 | 1..186 | 987 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12755-PA | 186 | GH12755-PA | 1..186 | 1..186 | 889 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL17-PE | 186 | CG3203-PE | 1..186 | 1..186 | 976 | 100 | Plus |
RpL17-PA | 186 | CG3203-PA | 1..186 | 1..186 | 976 | 100 | Plus |
RpL17-PD | 186 | CG3203-PD | 1..186 | 1..186 | 976 | 100 | Plus |
RpL17-PC | 186 | CG3203-PC | 1..186 | 1..186 | 976 | 100 | Plus |
RpL17-PB | 186 | CG3203-PB | 1..186 | 1..186 | 976 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15202-PA | 186 | GI15202-PA | 1..186 | 1..186 | 895 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26747-PA | 303 | GL26747-PA | 119..303 | 2..186 | 973 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16622-PA | 186 | GA16622-PA | 1..186 | 1..186 | 976 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12554-PA | 186 | GM12554-PA | 1..186 | 1..186 | 993 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16610-PA | 186 | GJ16610-PA | 1..186 | 1..186 | 892 | 94.1 | Plus |
Dvir\GJ20274-PA | 186 | GJ20274-PA | 1..186 | 1..186 | 841 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16300-PA | 186 | GK16300-PA | 1..186 | 1..186 | 895 | 94.1 | Plus |
Dwil\GK20261-PA | 119 | GK20261-PA | 1..119 | 39..186 | 453 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16448-PA | 186 | GE16448-PA | 1..186 | 1..186 | 987 | 98.9 | Plus |