BDGP Sequence Production Resources |
Search the DGRC for GM02293
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 22 |
Well: | 93 |
Vector: | pBS SK- |
Associated Gene/Transcript | Clc-RA |
Protein status: | GM02293.pep: gold |
Preliminary Size: | 1257 |
Sequenced Size: | 1142 |
Gene | Date | Evidence |
---|---|---|
CG6948 | 2001-01-01 | Release 2 assignment |
CG6948 | 2002-06-10 | Blastp of sequenced clone |
CG6948 | 2003-01-01 | Sim4 clustering to Release 3 |
Clc | 2008-04-29 | Release 5.5 accounting |
Clc | 2008-08-15 | Release 5.9 accounting |
Clc | 2008-12-18 | 5.12 accounting |
1142 bp (1142 high quality bases) assembled on 2002-06-10
GenBank Submission: AY121633
> GM02293.complete TTTTATGGTTGGTTCACGTACTAATGACAGTCATTTTACGTATTCATTGC TAAAAGAAAACTGAAAAAATACATTTGACCAAGTTTCCGGTTAGTCATCC GCCCACACCGATCTTCAATTAGTCCTAACCGAATCAAAGGAGAGAGAGCA CATAGCCATGGACTTCGGAGACGATTTCGCTGCCAAGGAGGACGTGGATC CGGCGGCCGAGTTCCTGGCGCGCGAACAGTCAGCTCTCGGGGACTTGGAG GCGGAGATTACGGGTGGATCTGCATCAGCTCCTCCGGCTGCATCCACAGA CGAGGGCTTGGGTGAGCTTCTGGGAGGCACCGCCTCCGAAGGCGATTTGC TCTCTGCTGGCGGCACGGGTGGCCTCGAATCCTCCACTGGCAGTTTTGAG GTCATTGGTGGCGAGTCCAATGAACCCGTGGGCATATCCGGTCCGCCGCC GTCGCGGGAAGAGCCCGAAAAGATACGCAAATGGCGCGAAGAGCAAAAGC AACGACTGGAGGAGAAGGACATCGAGGAGGAGCGAAAAAAGGAGGAACTC CGACAGCAGTCCAAGAAGGAGCTGGACGACTGGTTGCGCCAGATTGGCGA GTCCATATCGAAGACCAAACTGGCGTCGCGGAATGCCGAGAAACAAGCCG CCACCCTGGAGAATGGCACCATCGAGCCGGGCACCGAATGGGAGCGCATA GCCAAGCTCTGCGACTTCAATCCCAAGGTGAACAAGGCGGGAAAGGACGT CTCCCGCATGCGATCCATCTACCTGCACCTCAAGCAGAATCCCATCCAGG TGCAGAAGAGCACCTAGGTAGTTTTAATTACGCACTCGCCTAACCACATT GAGTTGAATATGAAAATTATTATTGAAAGTATTCGCTGTATATTCCAATT TATGATACATAAAATATTATTATTGCTGCTATAACATAGCCGCGATCATC GTTTTGTCTAATGAATGCAATAAAGAATGTGCACACAGTTGTCATGCTTT CCTTGACTATCATATACCCCATCACACAAAATAAGAAAAACGACATGAAA AAGTTAGGAAAAAGAACAAATAAAAAATAAAACCAAGGATATGACAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Clc-RA | 1273 | Clc-RA | 87..1183 | 1..1097 | 5470 | 99.9 | Plus |
Clc-RC | 1246 | Clc-RC | 294..1246 | 143..1095 | 4750 | 99.8 | Plus |
Clc-RB | 1005 | Clc-RB | 55..1005 | 145..1095 | 4740 | 99.8 | Plus |
Clc-RC | 1246 | Clc-RC | 35..178 | 1..144 | 720 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20231693..20231836 | 1..144 | 100 | -> | Plus |
chr3L | 20231954..20232904 | 145..1095 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Clc-RA | 1..660 | 158..817 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Clc-RC | 1..660 | 158..817 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Clc-RB | 1..660 | 158..817 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Clc-RA | 1..660 | 158..817 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Clc-RB | 1..660 | 158..817 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Clc-RA | 35..1129 | 1..1095 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Clc-RA | 35..1129 | 1..1095 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Clc-RA | 19..1113 | 1..1095 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Clc-RA | 35..1129 | 1..1095 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Clc-RA | 19..1113 | 1..1095 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20242524..20242667 | 1..144 | 100 | -> | Plus |
3L | 20242785..20243735 | 145..1095 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20242524..20242667 | 1..144 | 100 | -> | Plus |
3L | 20242785..20243735 | 145..1095 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20242524..20242667 | 1..144 | 100 | -> | Plus |
3L | 20242785..20243735 | 145..1095 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20235624..20235767 | 1..144 | 100 | -> | Plus |
arm_3L | 20235885..20236835 | 145..1095 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20235885..20236835 | 145..1095 | 99 | Plus | |
3L | 20235624..20235767 | 1..144 | 100 | -> | Plus |
Translation from 157 to 816
> GM02293.hyp MDFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAASTDEG LGELLGGTASEGDLLSAGGTGGLESSTGSFEVIGGESNEPVGISGPPPSR EEPEKIRKWREEQKQRLEEKDIEEERKKEELRQQSKKELDDWLRQIGESI SKTKLASRNAEKQAATLENGTIEPGTEWERIAKLCDFNPKVNKAGKDVSR MRSIYLHLKQNPIQVQKST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Clc-PD | 219 | CG6948-PD | 1..219 | 1..219 | 1117 | 100 | Plus |
Clc-PC | 219 | CG6948-PC | 1..219 | 1..219 | 1117 | 100 | Plus |
Clc-PB | 219 | CG6948-PB | 1..219 | 1..219 | 1117 | 100 | Plus |
Clc-PA | 219 | CG6948-PA | 1..219 | 1..219 | 1117 | 100 | Plus |
Translation from 157 to 816
> GM02293.pep MDFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAASTDEG LGELLGGTASEGDLLSAGGTGGLESSTGSFEVIGGESNEPVGISGPPPSR EEPEKIRKWREEQKQRLEEKDIEEERKKEELRQQSKKELDDWLRQIGESI SKTKLASRNAEKQAATLENGTIEPGTEWERIAKLCDFNPKVNKAGKDVSR MRSIYLHLKQNPIQVQKST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25317-PA | 225 | GF25317-PA | 1..225 | 1..219 | 858 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16091-PA | 219 | GG16091-PA | 1..219 | 1..219 | 1101 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15111-PA | 221 | GH15111-PA | 1..220 | 1..218 | 842 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Clc-PD | 219 | CG6948-PD | 1..219 | 1..219 | 1117 | 100 | Plus |
Clc-PC | 219 | CG6948-PC | 1..219 | 1..219 | 1117 | 100 | Plus |
Clc-PB | 219 | CG6948-PB | 1..219 | 1..219 | 1117 | 100 | Plus |
Clc-PA | 219 | CG6948-PA | 1..219 | 1..219 | 1117 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13763-PA | 223 | GI13763-PA | 3..221 | 1..217 | 852 | 84 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25123-PA | 222 | GL25123-PA | 1..222 | 1..219 | 873 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19975-PA | 222 | GA19975-PA | 1..222 | 1..219 | 873 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22265-PA | 219 | GM22265-PA | 1..219 | 1..219 | 1104 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14863-PA | 219 | GD14863-PA | 1..219 | 1..219 | 1118 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13754-PA | 223 | GJ13754-PA | 1..221 | 1..217 | 807 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17241-PA | 217 | GK17241-PA | 1..216 | 1..218 | 863 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19653-PA | 219 | GE19653-PA | 1..219 | 1..219 | 1118 | 99.5 | Plus |