Clone GM02567 Report

Search the DGRC for GM02567

Clone and Library Details

Library:GM
Tissue Source:Drosophila melanogaster ovary
Created by:Ling Hong
Date Registered:1997-11-24
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:25
Well:67
Vector:pBS SK-
Associated Gene/TranscriptCG5114-RA
Protein status:GM02567.pep: gold
Preliminary Size:1559
Sequenced Size:1450

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5114 2001-01-01 Release 2 assignment
CG5114 2001-10-10 Blastp of sequenced clone
CG5114 2003-01-01 Sim4 clustering to Release 3
CG5114 2008-04-29 Release 5.5 accounting
CG5114 2008-08-15 Release 5.9 accounting
CG5114 2008-12-18 5.12 accounting

Clone Sequence Records

GM02567.complete Sequence

1450 bp (1450 high quality bases) assembled on 2001-10-10

GenBank Submission: AY060846

> GM02567.complete
TGATTTTCTAGCACGTGTGATACATTCATTTAATTGTTATTTTTATGCAG
CTTAACTTGCTATTTGGACCATTAAGAGAATAGGAATGCGTGACAACACA
CCGCCACACCGGCCAGATTTCGATGACGGCGACGACGAACTCCAGGAGAT
AATTGAGCTGGAGGAGCAGCCGCTGGACGAAGATGACGACGATTTGGAGG
AGGTGACGCTGGAGCAACTGGAGGCCCGGCTTGCAATGGCCGGTGGCGAT
GATGATGAAGAGGAGGACGAGGAGGAGCTACGTGACCGTGAGAGAATAGC
AGCCATCACGGACGAAGCTACGGTCACTTTCAAGAAGCACACCGCTCCTG
TTTTCGCCTGCAGTCTGCATCCCAACTACAATTGGGCGGTGACGGGCAGC
GAGGACGATCGAGCCTTCGTTTGGGAAACCTCCACCGGCGATGTCCTCTA
CGAGATCACGGAGCACAAGGACACCGTCACGGAAACGCATTTCAGTCACG
ACGGCGTCTATTTGGCCACCGGTGATCTAGCCGGCGATCTGTTTGTCTTC
AAGGTCAGTGAAAAGCACGACGAACGTCCGATCCTGACTAAAATCTGGGA
GTACTCCATGAGCGACATGTCCTGGCTCTTCTGGCATCGAGCTGCCCACA
TCCTGCTGGCGGGTAGTGACAGCGGAGAGGTCTTCGTTTTCCGCATACCC
AGCGGTGAATGCAAAATCCTGCCGGGACAATCTTCGCGTTGCGAGTCCGG
AGAGCTCAGTGGGGATGGCAAAAAGCTGTTCACGGCCTACGTGAACGGAT
CCGTAAAGCTGTGGGATCTCAAGAGCTGTCAGGTGCTCATTGACGTAAAC
GAATCGCATCCAATGGGTTTCGGCGAGATCACGCACGCGGTGGTGGCCTG
CGAAAGGGAATCGCCCTTCTACGTCTGCGCTGAGGCGTCCGGAAAAATGC
TGTTCTGCACTAACAACGGTCCGGTTAGCACAATCCAGTCGGAACACGGT
ATTGAGTGTCTGGCCTTTGCTCCCTCCTCGGCGGATCTAAAGCTCTTTGC
CTGTGGCTCGCTGGACGGCAGGATATCCATCTGGGACTATGCCAAATCAG
CGTTGCGTACCATATGCGAAAATCCAGTTCCCAATGATGCTGTCATAAGG
ATCAAATGGTTGAACGACCACACGATACTTGCGGCCACCTCGCAGGGAAA
TCTGAACGCATTCGACGCACGCACAGGAATTCTGAAATTCACTCTGACGG
GACACTACTATCACATCTACGAGTTTGTCTACAAGCCTCAGGAAAATCTA
TTGCTAACGGTATCCGAGGACAACACGGCCAAGATATTCAAGGTGCCGGC
GCTGGGCGATTAGTTAGGTTTTAAAGTTGTGTACTGTGCTATATATGTGT
AAATAGTAAATACATATTAAAATTTAAAAAAAAAAAAAAAAAAAAAAAAA

GM02567.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:05:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG5114-RA 1656 CG5114-RA 102..1527 1..1426 7055 99.6 Plus
CG5114.a 1495 CG5114.a 3..944 1..942 4695 99.8 Plus
CG5114.a 1495 CG5114.a 1004..1488 942..1426 2365 99.1 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:19:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 14972912..14973853 1..942 4650 99.6 Plus
chr3L 24539361 chr3L 14974271..14974548 1148..1425 1330 98.6 Plus
chr3L 24539361 chr3L 14973974..14974183 941..1150 1035 99.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:14:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:19:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14982850..14983791 1..942 4695 99.9 Plus
3L 28110227 3L 14984209..14984487 1148..1426 1350 98.9 Plus
3L 28110227 3L 14983912..14984121 941..1150 1035 99.5 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:30:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 14975950..14976891 1..942 4695 99.8 Plus
3L 28103327 3L 14977309..14977587 1148..1426 1350 98.9 Plus
3L 28103327 3L 14977012..14977221 941..1150 1035 99.5 Plus
Blast to na_te.dros performed on 2019-03-15 20:19:24 has no hits.

GM02567.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:20:08 Download gff for GM02567.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 14974273..14974548 1150..1425 98   Plus
chr3L 14972912..14973852 1..941 99 -> Plus
chr3L 14973975..14974182 942..1149 99 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:02:07 Download gff for GM02567.complete
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 1..1278 86..1363 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:41:29 Download gff for GM02567.complete
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 1..1278 86..1363 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:06:20 Download gff for GM02567.complete
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 1..1278 86..1363 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:10:26 Download gff for GM02567.complete
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 1..1278 86..1363 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:34:10 Download gff for GM02567.complete
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 1..1278 86..1363 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:23:27 Download gff for GM02567.complete
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 3..1427 1..1425 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:41:29 Download gff for GM02567.complete
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 3..1427 1..1425 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:06:20 Download gff for GM02567.complete
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 16..1440 1..1425 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:10:27 Download gff for GM02567.complete
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 3..1427 1..1425 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:34:10 Download gff for GM02567.complete
Subject Subject Range Query Range Percent Splice Strand
CG5114-RA 16..1440 1..1425 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:20:08 Download gff for GM02567.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14982850..14983790 1..941 99 -> Plus
3L 14983913..14984120 942..1149 99 -> Plus
3L 14984211..14984486 1150..1425 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:20:08 Download gff for GM02567.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14982850..14983790 1..941 99 -> Plus
3L 14983913..14984120 942..1149 99 -> Plus
3L 14984211..14984486 1150..1425 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:20:08 Download gff for GM02567.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14982850..14983790 1..941 99 -> Plus
3L 14983913..14984120 942..1149 99 -> Plus
3L 14984211..14984486 1150..1425 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:06:20 Download gff for GM02567.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14977311..14977586 1150..1425 98   Plus
arm_3L 14975950..14976890 1..941 99 -> Plus
arm_3L 14977013..14977220 942..1149 99 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:46:38 Download gff for GM02567.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14975950..14976890 1..941 99 -> Plus
3L 14977013..14977220 942..1149 99 -> Plus
3L 14977311..14977586 1150..1425 98   Plus

GM02567.pep Sequence

Translation from 85 to 1362

> GM02567.pep
MRDNTPPHRPDFDDGDDELQEIIELEEQPLDEDDDDLEEVTLEQLEARLA
MAGGDDDEEEDEEELRDRERIAAITDEATVTFKKHTAPVFACSLHPNYNW
AVTGSEDDRAFVWETSTGDVLYEITEHKDTVTETHFSHDGVYLATGDLAG
DLFVFKVSEKHDERPILTKIWEYSMSDMSWLFWHRAAHILLAGSDSGEVF
VFRIPSGECKILPGQSSRCESGELSGDGKKLFTAYVNGSVKLWDLKSCQV
LIDVNESHPMGFGEITHAVVACERESPFYVCAEASGKMLFCTNNGPVSTI
QSEHGIECLAFAPSSADLKLFACGSLDGRISIWDYAKSALRTICENPVPN
DAVIRIKWLNDHTILAATSQGNLNAFDARTGILKFTLTGHYYHIYEFVYK
PQENLLLTVSEDNTAKIFKVPALGD*

GM02567.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:41:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23794-PA 424 GF23794-PA 1..424 1..425 1876 82.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:41:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15707-PA 425 GG15707-PA 1..425 1..425 1943 94.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:41:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16663-PA 433 GH16663-PA 1..433 1..425 1644 70.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:31:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG5114-PA 425 CG5114-PA 1..425 1..425 2265 100 Plus
CG5114-PB 445 CG5114-PB 1..445 1..425 2234 95.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:41:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11348-PA 427 GI11348-PA 1..427 1..425 1632 70.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:41:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24686-PA 428 GL24686-PA 1..428 1..425 1620 73.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:41:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18669-PA 427 GA18669-PA 1..427 1..425 1750 77.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:41:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25495-PA 425 GM25495-PA 1..425 1..425 2244 98.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:41:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14515-PA 425 GD14515-PA 1..425 1..425 2250 98.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:41:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11602-PA 432 GJ11602-PA 1..432 1..425 1771 75.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:41:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10547-PA 427 GK10547-PA 1..427 1..425 1667 71.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:41:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22038-PA 425 GE22038-PA 1..425 1..425 1890 91.5 Plus

GM02567.hyp Sequence

Translation from 85 to 1362

> GM02567.hyp
MRDNTPPHRPDFDDGDDELQEIIELEEQPLDEDDDDLEEVTLEQLEARLA
MAGGDDDEEEDEEELRDRERIAAITDEATVTFKKHTAPVFACSLHPNYNW
AVTGSEDDRAFVWETSTGDVLYEITEHKDTVTETHFSHDGVYLATGDLAG
DLFVFKVSEKHDERPILTKIWEYSMSDMSWLFWHRAAHILLAGSDSGEVF
VFRIPSGECKILPGQSSRCESGELSGDGKKLFTAYVNGSVKLWDLKSCQV
LIDVNESHPMGFGEITHAVVACERESPFYVCAEASGKMLFCTNNGPVSTI
QSEHGIECLAFAPSSADLKLFACGSLDGRISIWDYAKSALRTICENPVPN
DAVIRIKWLNDHTILAATSQGNLNAFDARTGILKFTLTGHYYHIYEFVYK
PQENLLLTVSEDNTAKIFKVPALGD*

GM02567.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 08:00:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG5114-PA 425 CG5114-PA 1..425 1..425 2265 100 Plus
CG5114-PB 445 CG5114-PB 1..445 1..425 2234 95.5 Plus