BDGP Sequence Production Resources |
Search the DGRC for GM02602
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 26 |
Well: | 2 |
Vector: | pBS SK- |
Associated Gene/Transcript | Rbp1-RD |
Protein status: | GM02602.pep: gold |
Preliminary Size: | 1657 |
Sequenced Size: | 1502 |
Gene | Date | Evidence |
---|---|---|
CG17136 | 2001-01-01 | Release 2 assignment |
CG17136 | 2001-11-09 | Blastp of sequenced clone |
CG17136 | 2003-01-01 | Sim4 clustering to Release 3 |
Rbp1 | 2008-04-29 | Release 5.5 accounting |
Rbp1 | 2008-08-15 | Release 5.9 accounting |
Rbp1 | 2008-12-18 | 5.12 accounting |
1502 bp (1502 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069252
> GM02602.complete AAAGGCGGAGATTTTTGTTAAAATTTTAACAAAATTGGATGACATTTTAG AAGCCGCTTGCTCACCTCCCGCAATACTCACGATACCGCACCGCCCGACA AAAATGCCGCGATATAGGGAGTGGGACTTGGCCTGCAAGGTGTACGTGGG AAACCTGGGCTCCTCGGCGTCCAAGCACGAGATAGAAGGCGCATTTGCCA AATATGGACCCCTGCGAAACGTGTGGGTGGCCCGCAATCCACCAGGTTTC GCCTTTGTCGAATTTGAGGATCGCCGTGACGCGGAAGACGCAACGCGTGC CCTGGACGGAACACGCTGCTGCGGCACCAGGATTCGCGTAGAGATGTCTT CGGGTCGCTCGCGCGATCGCCGGCGCGGAGAAGGCGGCAGTAGTGGTCGC TCTGGTTCCGGACGCTACAGGATAACTCCTTCGGCTAGAACTACTTCCAC TGCTACTTCTTCCTTCTACAACATCAACAATCTACAACAGCAACCATCTT CACAGCCACAGCCAGCAACCTTCAACTTGCAACTCTAAATTAACCATGTT CAGCGTCACAGCCTCACAGAAGTTTTGATTAGCAACCCAAATGATTTCAT CCTAGAAGAAGCAATGCAGTCGCCCAAAGAGTTCTTTTTTAAAGTTATCC TGCGTATCCTTCAAATAATTGCTTACAATTATTTCTTTAATTTAGTTGCC TATGATATGAGGGTTCGTCCGCTTTCTCAAGTACTTGACTCTGATGTCGA GAAAACTGGCCTTGAACGCGTTTAACGCTGATGATCACAGCTACTATAGA TTTGTTCGACCATTTTCTTATTGCATATGTATCCGACAAAGTAGAAAGCT TTAAACTCTAATTATAGGATATCAGTTGGTAATAGATAGTAAATGTAATT GCAGCAGCTAAATGTAATAGCAGCATTAGCAATAATACTCTTATCTTAAT TGGTTCACAGCTTAATTCATAGAAACAAAACAGTTTGCACAGCTTTCATT TTTGTTCCCCCTGGTAATTAGTTTAAGTAACTATTTAGCAGTATTTAACA CTCCTATTTTGCAGCTCTTTGTAAGGCGCGTATGTACATACACTTCTTAC CATTCTAAGCTGATTTAAATAATTTTATTAAGCTTTTAAGTAATCATTTC TTCTTTACCAATGCGTTTATTTCAGGTCACGTTCGCCACGTCGCTCCCGA TCGCCCCGCAGCCGCAGCTTCTCGCGCGATCGTCGAAGTCGCTCGGATTC TCGGGATCGTCATTAATGTTTCCAAAAGGATATCGTTTAAGCAGTGTCGC ATCAAAGAACAAGCCGGCCAAGGCCGTATTTTCTGTAGGAATTCCTATGT CGATTGCGATCCAAGTAAATTTACTTCAGATGACAATATAAATCTTTCGA TGCATTCTTGAAATTCCTTATTTTTTTACTAAAAAATAAAGACGCACAAT CAGCGAGTTTTGATTGGTTTCATATATCATCAAAAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rbp1-RD | 1600 | Rbp1-RD | 76..1563 | 1..1486 | 7355 | 99.7 | Plus |
Rbp1-RA | 845 | Rbp1-RA | 76..496 | 1..421 | 2090 | 99.7 | Plus |
Rbp1-RC | 762 | Rbp1-RC | 44..413 | 52..421 | 1835 | 99.7 | Plus |
Rbp1-RA | 845 | Rbp1-RA | 493..808 | 1173..1486 | 1510 | 99 | Plus |
Rbp1-RC | 762 | Rbp1-RC | 410..725 | 1173..1486 | 1510 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 6610920..6611983 | 418..1481 | 5305 | 99.9 | Plus |
chr3R | 27901430 | chr3R | 6610075..6610444 | 52..421 | 1850 | 100 | Plus |
chrX | 22417052 | chrX | 13275219..13275464 | 348..103 | 480 | 79.7 | Minus |
chr3R | 27901430 | chr3R | 6609948..6610000 | 1..53 | 265 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 10785400..10786470 | 418..1486 | 5275 | 99.7 | Plus |
3R | 32079331 | 3R | 10784555..10784924 | 52..421 | 1835 | 99.7 | Plus |
X | 23542271 | X | 13384444..13384689 | 348..103 | 480 | 79.7 | Minus |
3R | 32079331 | 3R | 10784428..10784480 | 1..53 | 265 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 10526231..10527301 | 418..1486 | 5285 | 99.7 | Plus |
3R | 31820162 | 3R | 10525386..10525755 | 52..421 | 1835 | 99.7 | Plus |
X | 23527363 | X | 13392542..13392787 | 348..103 | 480 | 79.6 | Minus |
3R | 31820162 | 3R | 10525259..10525311 | 1..53 | 265 | 100 | Plus |
X | 23527363 | X | 13389055..13389113 | 1265..1207 | 145 | 83 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 6609948..6610000 | 1..53 | 100 | -> | Plus |
chr3R | 6610077..6610443 | 54..420 | 100 | -> | Plus |
chr3R | 6610923..6611983 | 421..1481 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbp1-RD | 1..435 | 104..538 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbp1-RD | 1..435 | 104..538 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbp1-RD | 1..435 | 104..538 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbp1-RD | 1..435 | 104..538 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbp1-RD | 1..435 | 104..538 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbp1-RD | 30..1512 | 1..1481 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbp1-RD | 30..1512 | 1..1481 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbp1-RD | 46..1528 | 1..1481 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbp1-RD | 30..1512 | 1..1481 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbp1-RD | 46..1528 | 1..1481 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10784428..10784480 | 1..53 | 100 | -> | Plus |
3R | 10784557..10784923 | 54..420 | 99 | -> | Plus |
3R | 10785403..10786465 | 421..1481 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10784428..10784480 | 1..53 | 100 | -> | Plus |
3R | 10784557..10784923 | 54..420 | 99 | -> | Plus |
3R | 10785403..10786465 | 421..1481 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10784428..10784480 | 1..53 | 100 | -> | Plus |
3R | 10784557..10784923 | 54..420 | 99 | -> | Plus |
3R | 10785403..10786465 | 421..1481 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 6610150..6610202 | 1..53 | 100 | -> | Plus |
arm_3R | 6610279..6610645 | 54..420 | 99 | -> | Plus |
arm_3R | 6611125..6612187 | 421..1481 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10525388..10525754 | 54..420 | 99 | -> | Plus |
3R | 10526234..10527296 | 421..1481 | 99 | Plus | |
3R | 10525259..10525311 | 1..53 | 100 | -> | Plus |
Translation from 0 to 537
> GM02602.hyp KAEIFVKILTKLDDILEAACSPPAILTIPHRPTKMPRYREWDLACKVYVG NLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRA LDGTRCCGTRIRVEMSSGRSRDRRRGEGGSSGRSGSGRYRITPSARTTST ATSSFYNINNLQQQPSSQPQPATFNLQL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rbp1-PD | 144 | CG17136-PD | 1..144 | 35..178 | 761 | 100 | Plus |
Rbp1-PA | 135 | CG17136-PA | 1..121 | 35..155 | 580 | 90.9 | Plus |
Rbp1-like-PB | 247 | CG1987-PB | 1..142 | 35..152 | 490 | 69 | Plus |
Rbp1-like-PC | 158 | CG1987-PC | 1..101 | 35..135 | 479 | 88.1 | Plus |
Rbp1-like-PA | 158 | CG1987-PA | 1..101 | 35..135 | 479 | 88.1 | Plus |
Translation from 103 to 537
> GM02602.pep MPRYREWDLACKVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFA FVEFEDRRDAEDATRALDGTRCCGTRIRVEMSSGRSRDRRRGEGGSSGRS GSGRYRITPSARTTSTATSSFYNINNLQQQPSSQPQPATFNLQL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17902-PA | 163 | GF17902-PA | 1..150 | 1..144 | 580 | 82 | Plus |
Dana\GF19500-PA | 179 | GF19500-PA | 1..81 | 1..81 | 430 | 95.1 | Plus |
Dana\GF14123-PA | 192 | GF14123-PA | 6..78 | 10..82 | 222 | 54.8 | Plus |
Dana\GF16525-PA | 253 | GF16525-PA | 7..81 | 11..84 | 159 | 47.4 | Plus |
Dana\GF17608-PA | 350 | GF17608-PA | 2..77 | 9..87 | 140 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17683-PA | 144 | GG17683-PA | 1..144 | 1..144 | 761 | 100 | Plus |
Dere\GG19507-PA | 159 | GG19507-PA | 1..81 | 1..81 | 422 | 95.1 | Plus |
Dere\GG23961-PA | 200 | GG23961-PA | 9..81 | 10..82 | 224 | 54.8 | Plus |
Dere\GG20059-PA | 255 | GG20059-PA | 7..78 | 11..81 | 157 | 47.2 | Plus |
Dere\GG19772-PA | 135 | GG19772-PA | 2..77 | 9..87 | 137 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24472-PA | 163 | GH24472-PA | 1..81 | 1..81 | 422 | 95.1 | Plus |
Dgri\GH13017-PA | 201 | GH13017-PA | 6..78 | 10..82 | 224 | 54.8 | Plus |
Dgri\GH18077-PA | 252 | GH18077-PA | 7..81 | 11..84 | 159 | 47.4 | Plus |
Dgri\GH18528-PA | 360 | GH18528-PA | 2..77 | 9..87 | 139 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rbp1-PD | 144 | CG17136-PD | 1..144 | 1..144 | 761 | 100 | Plus |
Rbp1-PA | 135 | CG17136-PA | 1..121 | 1..121 | 580 | 90.9 | Plus |
Rbp1-like-PB | 247 | CG1987-PB | 1..142 | 1..118 | 490 | 69 | Plus |
Rbp1-like-PC | 158 | CG1987-PC | 1..101 | 1..101 | 479 | 88.1 | Plus |
Rbp1-like-PA | 158 | CG1987-PA | 1..101 | 1..101 | 479 | 88.1 | Plus |
x16-PB | 257 | CG10203-PB | 9..100 | 12..103 | 280 | 57.6 | Plus |
x16-PA | 258 | CG10203-PA | 9..100 | 12..103 | 280 | 57.6 | Plus |
Rsf1-PB | 200 | CG5655-PB | 11..136 | 12..123 | 258 | 46 | Plus |
Rsf1-PA | 200 | CG5655-PA | 11..136 | 12..123 | 258 | 46 | Plus |
SF2-PB | 255 | CG6987-PB | 7..107 | 11..101 | 165 | 41.6 | Plus |
SF2-PA | 255 | CG6987-PA | 7..107 | 11..101 | 165 | 41.6 | Plus |
B52-PI | 135 | CG10851-PI | 5..106 | 12..112 | 154 | 37.1 | Plus |
B52-PD | 135 | CG10851-PD | 5..106 | 12..112 | 154 | 37.1 | Plus |
B52-PK | 147 | CG10851-PK | 5..106 | 12..112 | 154 | 37.1 | Plus |
B52-PF | 147 | CG10851-PF | 5..106 | 12..112 | 154 | 37.1 | Plus |
B52-PN | 350 | CG10851-PN | 5..106 | 12..112 | 154 | 37.1 | Plus |
B52-PC | 350 | CG10851-PC | 5..106 | 12..112 | 154 | 37.1 | Plus |
B52-PA | 350 | CG10851-PA | 5..106 | 12..112 | 154 | 37.1 | Plus |
B52-PB | 329 | CG10851-PB | 5..99 | 12..105 | 149 | 37.8 | Plus |
B52-PO | 355 | CG10851-PO | 5..99 | 12..105 | 149 | 37.8 | Plus |
B52-PM | 355 | CG10851-PM | 5..99 | 12..105 | 149 | 37.8 | Plus |
SC35-PD | 195 | CG5442-PD | 27..139 | 15..115 | 148 | 35.4 | Plus |
SC35-PC | 195 | CG5442-PC | 27..139 | 15..115 | 148 | 35.4 | Plus |
SC35-PB | 195 | CG5442-PB | 27..139 | 15..115 | 148 | 35.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15337-PA | 151 | GI15337-PA | 1..81 | 1..81 | 422 | 95.1 | Plus |
Dmoj\GI23736-PA | 137 | GI23736-PA | 1..81 | 1..81 | 418 | 92.6 | Plus |
Dmoj\GI19446-PA | 196 | GI19446-PA | 6..78 | 10..82 | 225 | 54.8 | Plus |
Dmoj\GI24651-PA | 246 | GI24651-PA | 7..81 | 11..84 | 159 | 47.4 | Plus |
Dmoj\GI22065-PA | 361 | GI22065-PA | 2..77 | 9..87 | 140 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26725-PA | 174 | GL26725-PA | 1..81 | 1..81 | 423 | 95.1 | Plus |
Dper\GL18979-PA | 196 | GL18979-PA | 9..110 | 10..110 | 252 | 52 | Plus |
Dper\GL22249-PA | 263 | GL22249-PA | 7..81 | 11..84 | 160 | 47.4 | Plus |
Dper\GL23543-PA | 358 | GL23543-PA | 2..77 | 9..87 | 140 | 38 | Plus |
Dper\GL12592-PA | 154 | GL12592-PA | 29..123 | 10..99 | 136 | 33.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15173-PA | 161 | GA15173-PA | 1..81 | 1..81 | 422 | 95.1 | Plus |
Dpse\GA30013-PA | 259 | GA30013-PA | 9..82 | 12..85 | 257 | 63.5 | Plus |
Dpse\GA19037-PA | 196 | GA19037-PA | 9..110 | 10..110 | 252 | 52 | Plus |
Dpse\GA20008-PA | 263 | GA20008-PA | 7..81 | 11..84 | 160 | 47.4 | Plus |
Dpse\GA11577-PA | 154 | GA11577-PA | 29..123 | 10..99 | 136 | 33.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23896-PA | 144 | GM23896-PA | 1..144 | 1..144 | 761 | 100 | Plus |
Dsec\GM13734-PA | 226 | GM13734-PA | 9..88 | 12..90 | 258 | 62.5 | Plus |
Dsec\GM11879-PA | 200 | GM11879-PA | 9..81 | 10..82 | 224 | 54.8 | Plus |
Dsec\GM15444-PA | 255 | GM15444-PA | 7..78 | 11..81 | 157 | 47.2 | Plus |
Dsec\GM24118-PA | 135 | GM24118-PA | 2..77 | 9..87 | 137 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18708-PA | 144 | GD18708-PA | 1..144 | 1..144 | 761 | 100 | Plus |
Dsim\GD22286-PA | 200 | GD22286-PA | 9..81 | 10..82 | 224 | 54.8 | Plus |
Dsim\GD18917-PA | 135 | GD18917-PA | 2..77 | 9..87 | 137 | 38 | Plus |
Dsim\GD19204-PA | 154 | GD19204-PA | 29..123 | 10..99 | 135 | 33.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10582-PA | 140 | GJ10582-PA | 1..89 | 1..89 | 451 | 93.3 | Plus |
Dvir\GJ14774-PA | 155 | GJ14774-PA | 1..81 | 1..81 | 429 | 96.3 | Plus |
Dvir\GJ17527-PA | 198 | GJ17527-PA | 6..78 | 10..82 | 224 | 54.8 | Plus |
Dvir\GJ23504-PA | 247 | GJ23504-PA | 7..81 | 11..84 | 159 | 47.4 | Plus |
Dvir\GJ24113-PA | 347 | GJ24113-PA | 2..77 | 9..87 | 139 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13897-PA | 140 | GK13897-PA | 1..104 | 1..104 | 433 | 88.5 | Plus |
Dwil\GK16401-PA | 176 | GK16401-PA | 1..81 | 1..81 | 428 | 95.1 | Plus |
Dwil\GK12439-PA | 192 | GK12439-PA | 6..78 | 10..82 | 223 | 54.8 | Plus |
Dwil\GK13511-PA | 263 | GK13511-PA | 7..78 | 11..81 | 157 | 47.2 | Plus |
Dwil\GK11244-PA | 154 | GK11244-PA | 29..123 | 10..99 | 137 | 33.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26048-PA | 135 | GE26048-PA | 1..81 | 1..81 | 442 | 100 | Plus |
Dyak\GE16161-PA | 160 | GE16161-PA | 1..81 | 1..81 | 422 | 95.1 | Plus |
Dyak\GE26241-PA | 200 | GE26241-PA | 9..81 | 10..82 | 224 | 54.8 | Plus |
Dyak\GE26323-PA | 254 | GE26323-PA | 7..78 | 11..81 | 157 | 47.2 | Plus |
Dyak\GE26284-PA | 135 | GE26284-PA | 2..77 | 9..87 | 137 | 38 | Plus |