BDGP Sequence Production Resources |
Search the DGRC for GM04147
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 41 |
Well: | 47 |
Vector: | pBS SK- |
Associated Gene/Transcript | dmpd-RA |
Protein status: | GM04147.pep: gold |
Preliminary Size: | 2444 |
Sequenced Size: | 2462 |
Gene | Date | Evidence |
---|---|---|
CG11866 | 2001-01-01 | Release 2 assignment |
CG11866 | 2001-10-10 | Blastp of sequenced clone |
CG11866 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11866 | 2008-04-29 | Release 5.5 accounting |
CG11866 | 2008-08-15 | Release 5.9 accounting |
CG11866 | 2008-12-18 | 5.12 accounting |
2462 bp (2462 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060879
> GM04147.complete TTTTAATTGTGCTCGAAAAACTGCGTTAAAGTGGATGTCAGCGTGGATGA ACTGCGTCTCAAAGAACTAGACATATTGGACCACGGCGAAGCGCGTCCAA AAACAATGCAATCGCAATAGTTCCATTTACTAAAACGGCAACTTCAAAAC GCTGCTGCAAACGAATTCTGTCCATTTAGCACCGAAACGCCACTGGAAGC AGAAGGAAATGGTGTCCACCCGCCAAATGTGCAGTGGAGGCGGTACGTCC GCTTCGGAGGGGGTTTCGCCGTTCGGGGGCGCGGGTTCGGGATCGGCCTC TGGAACGGGAATGGCTTCCGGATCAGCAGTGTCATCCGGATCGGGTACTG GAGTACAAGAGCCCCCCGAGTCCACAGCAAACCGTTCCTCCGTCCTGCGG CGAACCACCAGCTATCAGGGTAACCAGGCCCACAGTTCTTATCGTGTCGT CTCGGCGGGCAGCCTGGCCGAGTCCGCCAGTGCGGTGACTCGCCTCCACT CGTACACCATGCAGATGCAACGGCAGCGTCCACCGACTGCCACCACCACC ACCACCACCAGCGCACCCAGTCTGTACGATCTTCCCAACGAGCTGATTGA GAAGATCCTCAGCTACGTGGACTACAAGAAAGTTTCAAATCTCAGATTGG TGTCGCACCGCATGAACGACATTTGCATGGCCATGCTGAACACAGCCTTC ACCAAGCAGATCAAGACCACATTGAGCCGCTTCCAGGCGATCAAGGCCAG CATGCCGCGCCGGGAGTCCCATCGTCGTAATCATCCGTTGGCCTGCGAGT GCGACATCATCGAGACATGCTACATGCGTCTATCCCTGCTCCAGATGTCC ATGGGCAAGCACATCGAGCGGGGCCATTGTTGCTTCTTTCCGGGCGCCAT ACTAGACGAAGTCCAGGCGATTCTCAATTATATCAGTATTACGCCCAGGC TGCAGCGACCTTATCGGGTAACCGACGAGCTCTTCGATCTCTCCACTATG GCCATGGAATACTTTAAGGACCGCATCGAGGCCACGCTACCGGGGCTGGC GTATTTCAACAAGGACTTCTATACGCTGCCCACTACAACTAAGCGACCCA CGCTTGCCATCAGTTCAGATCTCGAAGACAGCGCCAGCAACTCGCCGCCT CAGAACCATATGGTGCTCCGCAAGGGCATCCGCAAGATCAAGCAGGGCAT GAAGATGTACAATAACCAGCTATCGGTGCTGCGCACCGAGCTTCGCACCT GCAAGCGCAAGGCCGCCGAGCAGAGCAAGCAGCTGGCTGAGCAATCAAAT CTAATATCGGAGCAGCAGAAGCAGACGCTGGAGTATGCCAATCGTCTGGA CGAAAACGACAAGAAGAACGAGGAGATGTCTCGCAAGTTCTCCACCCTTT TGCAGGAGCTCAACAAGTGCAAGACTGAGCTGCAGTTCTGGCGTTCGAAG AGTCCGGCCATCCCTGCCGTATGCAGTTCGTGCAATCAAAAGGTGGCGCC TGTGGTGCCGCCTGAAGATTTTCAAGCGCTGGTCAACCAGGGTGTGGATC CCGAGCACTTTATTATCATCAACGAAGATGTGGATGCCGAGAGCGATGTT AGTGTGGGCGAGCTAAAGGAGTTTGCCTCGCCGGATGAGTCCACCACGGC CAAGTTGCTGGCCGTGAGCACAGCAGCCAAGAATCTTAAGCGCAAGATGC CATCAGAGAGCCAGTCCAATGCCATAGCGTCCACCTCGAAGGCAGCAGAG GTTGCCCAGTCCCAATCGCAGCCGATGGCCACCGGAAATGCAGGAGCTGC CAAAGCTGCGGGAGGCTACTCCCCAAAACTGTTTTATGGCAATCATCAGC GAAGCGGCGTGATTGTCAGTCCTGTGTCCCAGAATCTGGGGGTGGCTGCG ACAACGGACAATGTGGCGCCCGGATCGGAGGCTCTTGAGGAGCCGGAGGA GGCGAAAAAAGCACGTAGAGTACAAAAGGCCAACAGATATGTAAATACGC CCGGCAAACGCAGTAAATAAGCATTAGGACCTACGCATATACACTTTACA TATTTTTTACCACTTATTTACATATAAAGCGTGCATGCCGTCGTTCACCT GACCCCACGGATGTGGATTAGGGAACGAGGCATGCGCCGTAGTGTTAACG GAGGAATCAAATTAATATTATATACACATATATCTATTAATGTCAAATGC AATAGGCATTTCGAATATTATTCATTATTATTATTATTATTATCACGTAC AAGTGTCTGTATGTTCTTCGGTTTTAACGCCCCGCAAAAACAAATTGTAG TTAACCACGAACATCACACGAATCCGGCAGTCATTGGCAGAGCAAAACAG ATAATAATAATTAAAAAGCAAATTAATTTTAACTAAGAAATACAAAAAGA AAAACAGCAAAGAAATATTTTAAATAAAACTTTAAAAACATTAAAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11866-RA | 2601 | CG11866-RA | 157..2601 | 1..2442 | 12065 | 99.6 | Plus |
CG11866.a | 2514 | CG11866.a | 208..2514 | 139..2442 | 11375 | 99.6 | Plus |
CCS-RA | 1489 | CCS-RA | 1221..1489 | 2446..2181 | 1245 | 98.1 | Minus |
CG11866.a | 2514 | CG11866.a | 39..176 | 1..138 | 690 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 6007936..6008978 | 1400..2442 | 5215 | 100 | Plus |
chr2R | 21145070 | chr2R | 6005560..6006073 | 138..651 | 2570 | 100 | Plus |
chr2R | 21145070 | chr2R | 6007581..6007889 | 1098..1406 | 1545 | 100 | Plus |
chr2R | 21145070 | chr2R | 6007008..6007257 | 649..898 | 1235 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 6007322..6007520 | 899..1097 | 995 | 100 | Plus |
chr2R | 21145070 | chr2R | 6005260..6005397 | 1..138 | 690 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 10120406..10121455 | 1400..2446 | 5125 | 99.4 | Plus |
2R | 25286936 | 2R | 10118031..10118544 | 138..651 | 2555 | 99.8 | Plus |
2R | 25286936 | 2R | 10120051..10120359 | 1098..1406 | 1530 | 99.7 | Plus |
2R | 25286936 | 2R | 10119478..10119727 | 649..898 | 1235 | 99.6 | Plus |
2R | 25286936 | 2R | 10119792..10119990 | 899..1097 | 995 | 100 | Plus |
2R | 25286936 | 2R | 10117731..10117868 | 1..138 | 690 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 10121605..10122654 | 1400..2446 | 5135 | 99.4 | Plus |
2R | 25260384 | 2R | 10119230..10119743 | 138..651 | 2555 | 99.8 | Plus |
2R | 25260384 | 2R | 10121250..10121558 | 1098..1406 | 1530 | 99.6 | Plus |
2R | 25260384 | 2R | 10120677..10120926 | 649..898 | 1235 | 99.6 | Plus |
2R | 25260384 | 2R | 10120991..10121189 | 899..1097 | 995 | 100 | Plus |
2R | 25260384 | 2R | 10118930..10119067 | 1..138 | 690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 6005260..6005397 | 1..138 | 100 | -> | Plus |
chr2R | 6005561..6006071 | 139..649 | 95 | -> | Plus |
chr2R | 6007009..6007257 | 650..898 | 99 | -> | Plus |
chr2R | 6007322..6007520 | 899..1097 | 100 | -> | Plus |
chr2R | 6007581..6007888 | 1098..1405 | 100 | -> | Plus |
chr2R | 6007942..6008978 | 1406..2442 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11866-RA | 1..1812 | 209..2020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11866-RB | 1..1812 | 209..2020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11866-RA | 1..1812 | 209..2020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11866-RA | 1..1812 | 209..2020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dmpd-RA | 1..1812 | 209..2020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11866-RA | 39..2483 | 1..2442 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11866-RA | 39..2483 | 1..2442 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11866-RA | 38..2482 | 1..2442 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11866-RA | 39..2483 | 1..2442 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dmpd-RA | 38..2482 | 1..2442 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10117731..10117868 | 1..138 | 100 | -> | Plus |
2R | 10118032..10118542 | 139..649 | 99 | -> | Plus |
2R | 10119479..10119727 | 650..898 | 99 | -> | Plus |
2R | 10119792..10119990 | 899..1097 | 100 | -> | Plus |
2R | 10120051..10120358 | 1098..1405 | 99 | -> | Plus |
2R | 10120412..10121451 | 1406..2442 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10117731..10117868 | 1..138 | 100 | -> | Plus |
2R | 10118032..10118542 | 139..649 | 99 | -> | Plus |
2R | 10119479..10119727 | 650..898 | 99 | -> | Plus |
2R | 10119792..10119990 | 899..1097 | 100 | -> | Plus |
2R | 10120051..10120358 | 1098..1405 | 99 | -> | Plus |
2R | 10120412..10121451 | 1406..2442 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10117731..10117868 | 1..138 | 100 | -> | Plus |
2R | 10118032..10118542 | 139..649 | 99 | -> | Plus |
2R | 10119479..10119727 | 650..898 | 99 | -> | Plus |
2R | 10119792..10119990 | 899..1097 | 100 | -> | Plus |
2R | 10120051..10120358 | 1098..1405 | 99 | -> | Plus |
2R | 10120412..10121451 | 1406..2442 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 6005236..6005373 | 1..138 | 100 | -> | Plus |
arm_2R | 6007297..6007495 | 899..1097 | 100 | -> | Plus |
arm_2R | 6005537..6006047 | 139..649 | 99 | -> | Plus |
arm_2R | 6006984..6007232 | 650..898 | 99 | -> | Plus |
arm_2R | 6007556..6007863 | 1098..1405 | 99 | -> | Plus |
arm_2R | 6007917..6008956 | 1406..2442 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10119231..10119741 | 139..649 | 99 | -> | Plus |
2R | 10120678..10120926 | 650..898 | 99 | -> | Plus |
2R | 10120991..10121189 | 899..1097 | 100 | -> | Plus |
2R | 10121250..10121557 | 1098..1405 | 99 | -> | Plus |
2R | 10121611..10122650 | 1406..2442 | 99 | Plus | |
2R | 10118930..10119067 | 1..138 | 100 | -> | Plus |
Translation from 208 to 2019
> GM04147.pep MVSTRQMCSGGGTSASEGVSPFGGAGSGSASGTGMASGSAVSSGSGTGVQ EPPESTANRSSVLRRTTSYQGNQAHSSYRVVSAGSLAESASAVTRLHSYT MQMQRQRPPTATTTTTTSAPSLYDLPNELIEKILSYVDYKKVSNLRLVSH RMNDICMAMLNTAFTKQIKTTLSRFQAIKASMPRRESHRRNHPLACECDI IETCYMRLSLLQMSMGKHIERGHCCFFPGAILDEVQAILNYISITPRLQR PYRVTDELFDLSTMAMEYFKDRIEATLPGLAYFNKDFYTLPTTTKRPTLA ISSDLEDSASNSPPQNHMVLRKGIRKIKQGMKMYNNQLSVLRTELRTCKR KAAEQSKQLAEQSNLISEQQKQTLEYANRLDENDKKNEEMSRKFSTLLQE LNKCKTELQFWRSKSPAIPAVCSSCNQKVAPVVPPEDFQALVNQGVDPEH FIIINEDVDAESDVSVGELKEFASPDESTTAKLLAVSTAAKNLKRKMPSE SQSNAIASTSKAAEVAQSQSQPMATGNAGAAKAAGGYSPKLFYGNHQRSG VIVSPVSQNLGVAATTDNVAPGSEALEEPEEAKKARRVQKANRYVNTPGK RSK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13725-PA | 605 | GF13725-PA | 1..605 | 1..603 | 2408 | 77.5 | Plus |
Dana\GF24660-PA | 316 | GF24660-PA | 2..154 | 121..273 | 320 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24142-PA | 604 | GG24142-PA | 1..604 | 1..603 | 2724 | 91.3 | Plus |
Dere\GG14032-PA | 314 | GG14032-PA | 2..154 | 121..273 | 305 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22835-PA | 595 | GH22835-PA | 25..595 | 56..603 | 1873 | 65 | Plus |
Dgri\GH16208-PA | 313 | GH16208-PA | 3..165 | 122..284 | 344 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dmpd-PB | 603 | CG11866-PB | 1..603 | 1..603 | 3061 | 100 | Plus |
dmpd-PA | 603 | CG11866-PA | 1..603 | 1..603 | 3061 | 100 | Plus |
pall-PA | 314 | CG3428-PA | 2..284 | 121..382 | 305 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21213-PA | 559 | GI21213-PA | 1..559 | 1..603 | 1902 | 65.1 | Plus |
Dmoj\GI13354-PA | 351 | GI13354-PA | 3..154 | 122..273 | 317 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20033-PA | 579 | GL20033-PA | 1..579 | 1..603 | 2117 | 70.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11246-PA | 579 | GA11246-PA | 1..579 | 1..603 | 2117 | 70.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21188-PA | 601 | GM21188-PA | 1..601 | 1..603 | 3123 | 96.7 | Plus |
Dsec\GM24866-PA | 307 | GM24866-PA | 2..154 | 121..273 | 309 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10716-PA | 601 | GD10716-PA | 1..601 | 1..603 | 3150 | 97.3 | Plus |
Dsim\GD12918-PA | 475 | GD12918-PA | 2..154 | 121..273 | 308 | 40.5 | Plus |
Dsim\GD12918-PA | 475 | GD12918-PA | 201..315 | 159..273 | 261 | 42.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20816-PA | 577 | GJ20816-PA | 1..577 | 1..603 | 1919 | 63 | Plus |
Dvir\GJ13184-PA | 342 | GJ13184-PA | 3..154 | 122..273 | 330 | 41.4 | Plus |
Translation from 208 to 2019
> GM04147.hyp MVSTRQMCSGGGTSASEGVSPFGGAGSGSASGTGMASGSAVSSGSGTGVQ EPPESTANRSSVLRRTTSYQGNQAHSSYRVVSAGSLAESASAVTRLHSYT MQMQRQRPPTATTTTTTSAPSLYDLPNELIEKILSYVDYKKVSNLRLVSH RMNDICMAMLNTAFTKQIKTTLSRFQAIKASMPRRESHRRNHPLACECDI IETCYMRLSLLQMSMGKHIERGHCCFFPGAILDEVQAILNYISITPRLQR PYRVTDELFDLSTMAMEYFKDRIEATLPGLAYFNKDFYTLPTTTKRPTLA ISSDLEDSASNSPPQNHMVLRKGIRKIKQGMKMYNNQLSVLRTELRTCKR KAAEQSKQLAEQSNLISEQQKQTLEYANRLDENDKKNEEMSRKFSTLLQE LNKCKTELQFWRSKSPAIPAVCSSCNQKVAPVVPPEDFQALVNQGVDPEH FIIINEDVDAESDVSVGELKEFASPDESTTAKLLAVSTAAKNLKRKMPSE SQSNAIASTSKAAEVAQSQSQPMATGNAGAAKAAGGYSPKLFYGNHQRSG VIVSPVSQNLGVAATTDNVAPGSEALEEPEEAKKARRVQKANRYVNTPGK RSK*