BDGP Sequence Production Resources |
Search the DGRC for GM04951
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 49 |
Well: | 51 |
Vector: | pBS SK- |
Associated Gene/Transcript | RPA2-RA |
Protein status: | GM04951.pep: gold |
Preliminary Size: | 1186 |
Sequenced Size: | 965 |
Gene | Date | Evidence |
---|---|---|
CG9273 | 2001-01-01 | Release 2 assignment |
CG9273 | 2001-11-29 | Blastp of sequenced clone |
CG9273 | 2003-01-01 | Sim4 clustering to Release 3 |
RPA2 | 2008-04-29 | Release 5.5 accounting |
RPA2 | 2008-08-15 | Release 5.9 accounting |
RPA2 | 2008-12-18 | 5.12 accounting |
965 bp (965 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069259
> GM04951.complete CGTTTTATTGTTTACCAGCGGCCCTTGTGAAATTATATAGAATACTCAAT TACAAAATCCCTCAAAAGCCAAGAAAATGAATGATTCATTTGGAGATTTC AATGCCACACAAACTGCGCCAACTGGAGCCGCCAGCAATCAAAAGGGAGA AGGAATAGTGCCCCTGGTGGTGAAGCAGATTGTGGACGCCCCAGAGGGAA ACATCGAGTTGTTCGGCATGCAGTACGCCATGGCATGTGTTGTGGCCATA GTGCGGAACGTGGAGACTTCCTCGACGAAGATCACCTACACCCTGGAGGA TCATAGCGGCAGGATCGATGCGCACTACTGGCTTGAGGAGGGCGACGCTC TCAAGGCACCCGAAGTAATGGTCAACAACTACGTGAAGGTCTACGGCACC ACCCGGTCGCAAGGCGGTTCCAAAACCCTAATGATCTTCAAGCTACTGCC CGTTTTGGATCCCAACGAGGTGTGCACCCACCTGCTGGAAGTACTCAATG CCCGCTACAGGGCCGAGGACTACCAGAGCAAGGGTGGAGCTGGAGCTGGT GCAGGGGCTTCTTCCGGCTCAGGCTCCATAGCTGATTTCACCGCCTCCCA GAGCTCGGCCATTGTCAGTGGGCTGGAGCCCAAGCAGCAGGCCGTATTCC AGGCCATCAAGAGCAATGTTTCCGAGGAGGGCATCTCCCGCAAGGAACTG AAAGCCAAATTCTCCCACATCAGCGACTCTGAGTTGACCAACATTCTGGA CTTTATGATTTCCGAGGGACACATTTATTCCAGCATTGACGCAGATCACT TTATTTGCACAATGTAAATCAAATCGTGTAACCACTATTTAATTTAAAAA TGCGTATTGAATATATGTATTAAGTTTTTGAAAAACGGGAACATTTTCCA TATATTAGTTGTACATTAAATATTTCTTATATAATCAGAAAAAAAAAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 20923793..20924379 | 738..152 | 2935 | 100 | Minus |
chr2L | 23010047 | chr2L | 20923504..20923703 | 938..739 | 1000 | 100 | Minus |
chr2L | 23010047 | chr2L | 20924563..20924650 | 89..1 | 395 | 98.9 | Minus |
chr2L | 23010047 | chr2L | 20924442..20924504 | 152..90 | 315 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20925264..20925850 | 738..152 | 2935 | 100 | Minus |
2L | 23513712 | 2L | 20924972..20925174 | 941..739 | 1015 | 100 | Minus |
2L | 23513712 | 2L | 20926034..20926121 | 89..1 | 395 | 98.9 | Minus |
2L | 23513712 | 2L | 20925913..20925975 | 152..90 | 315 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20925264..20925850 | 738..152 | 2935 | 100 | Minus |
2L | 23513712 | 2L | 20924972..20925174 | 941..739 | 1015 | 100 | Minus |
2L | 23513712 | 2L | 20926034..20926121 | 89..1 | 405 | 98.8 | Minus |
2L | 23513712 | 2L | 20925913..20925975 | 152..90 | 315 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 6359..6405 | 116..71 | 133 | 78.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 20923504..20923703 | 739..938 | 100 | <- | Minus |
chr2L | 20923793..20924379 | 152..738 | 100 | <- | Minus |
chr2L | 20924443..20924504 | 90..151 | 100 | <- | Minus |
chr2L | 20924563..20924650 | 1..89 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RPA2-RA | 1..741 | 77..817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RPA2-RA | 1..741 | 77..817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RPA2-RA | 1..741 | 77..817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RPA2-RA | 1..741 | 77..817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RPA2-RA | 1..741 | 77..817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RPA2-RA | 24..960 | 1..938 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RPA2-RA | 24..960 | 1..938 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RPA2-RA | 27..963 | 1..938 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RPA2-RA | 24..960 | 1..938 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RPA2-RA | 27..963 | 1..938 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20924975..20925174 | 739..938 | 100 | <- | Minus |
2L | 20925264..20925850 | 152..738 | 100 | <- | Minus |
2L | 20925914..20925975 | 90..151 | 100 | <- | Minus |
2L | 20926034..20926121 | 1..89 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20924975..20925174 | 739..938 | 100 | <- | Minus |
2L | 20925264..20925850 | 152..738 | 100 | <- | Minus |
2L | 20925914..20925975 | 90..151 | 100 | <- | Minus |
2L | 20926034..20926121 | 1..89 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20924975..20925174 | 739..938 | 100 | <- | Minus |
2L | 20925264..20925850 | 152..738 | 100 | <- | Minus |
2L | 20925914..20925975 | 90..151 | 100 | <- | Minus |
2L | 20926034..20926121 | 1..89 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 20925914..20925975 | 90..151 | 100 | <- | Minus |
arm_2L | 20926034..20926121 | 1..89 | 98 | Minus | |
arm_2L | 20924975..20925174 | 739..938 | 100 | <- | Minus |
arm_2L | 20925264..20925850 | 152..738 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20925264..20925850 | 152..738 | 100 | <- | Minus |
2L | 20925914..20925975 | 90..151 | 100 | <- | Minus |
2L | 20926034..20926121 | 1..89 | 98 | Minus | |
2L | 20924975..20925174 | 739..938 | 100 | <- | Minus |
Translation from 76 to 816
> GM04951.hyp MNDSFGDFNATQTAPTGAASNQKGEGIVPLVVKQIVDAPEGNIELFGMQY AMACVVAIVRNVETSSTKITYTLEDHSGRIDAHYWLEEGDALKAPEVMVN NYVKVYGTTRSQGGSKTLMIFKLLPVLDPNEVCTHLLEVLNARYRAEDYQ SKGGAGAGAGASSGSGSIADFTASQSSAIVSGLEPKQQAVFQAIKSNVSE EGISRKELKAKFSHISDSELTNILDFMISEGHIYSSIDADHFICTM*
Translation from 76 to 816
> GM04951.pep MNDSFGDFNATQTAPTGAASNQKGEGIVPLVVKQIVDAPEGNIELFGMQY AMACVVAIVRNVETSSTKITYTLEDHSGRIDAHYWLEEGDALKAPEVMVN NYVKVYGTTRSQGGSKTLMIFKLLPVLDPNEVCTHLLEVLNARYRAEDYQ SKGGAGAGAGASSGSGSIADFTASQSSAIVSGLEPKQQAVFQAIKSNVSE EGISRKELKAKFSHISDSELTNILDFMISEGHIYSSIDADHFICTM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24241-PA | 245 | GF24241-PA | 1..245 | 1..246 | 1212 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21537-PA | 246 | GG21537-PA | 1..246 | 1..246 | 1293 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13058-PA | 240 | GH13058-PA | 1..240 | 1..246 | 908 | 69.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RPA2-PB | 246 | CG9273-PB | 1..246 | 1..246 | 1250 | 100 | Plus |
RPA2-PA | 246 | CG9273-PA | 1..246 | 1..246 | 1250 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18202-PA | 242 | GI18202-PA | 1..242 | 1..246 | 959 | 70.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19582-PA | 237 | GL19582-PA | 1..237 | 1..246 | 1160 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21663-PA | 237 | GA21663-PA | 1..237 | 1..246 | 1160 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23291-PA | 246 | GM23291-PA | 1..246 | 1..246 | 1302 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21666-PA | 246 | GD21666-PA | 1..246 | 1..246 | 1305 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14710-PA | 242 | GJ14710-PA | 1..242 | 1..246 | 920 | 69.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24313-PA | 239 | GK24313-PA | 1..239 | 1..246 | 1045 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13014-PA | 244 | GE13014-PA | 1..244 | 1..246 | 1261 | 95.9 | Plus |