Clone GM05240 Report

Search the DGRC for GM05240

Clone and Library Details

Library:GM
Tissue Source:Drosophila melanogaster ovary
Created by:Ling Hong
Date Registered:1997-11-24
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:52
Well:40
Vector:pBS SK-
Associated Gene/TranscriptCG6178-RA
Protein status:GM05240.pep: gold
Preliminary Size:2192
Sequenced Size:1999

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6178 2001-01-01 Release 2 assignment
CG6178 2001-10-10 Blastp of sequenced clone
CG6178 2003-01-01 Sim4 clustering to Release 3
CG6178 2008-04-29 Release 5.5 accounting
CG6178 2008-08-15 Release 5.9 accounting
CG6178 2008-12-18 5.12 accounting

Clone Sequence Records

GM05240.complete Sequence

1999 bp (1999 high quality bases) assembled on 2001-10-10

GenBank Submission: AY060906

> GM05240.complete
AGCAGCACCATCCCCTGACCCATTTTTTGTTGCACTTTTGGTGTACTTTG
AATGAAAAATAGTCAGAGACACTACTCGCGCCTGCGCAGTTTCAACGCCG
GGGTTATCAAATAAGCTAATCTAATCGTTCCGTAAACGCAGCCTGACATT
CCGCCCTACCATTCTCCGACGAACAGTTAGTTTCGCACGCAAGCCGCTCC
CGCTCGCATCGTAACCTAGAAAACTTTAGCACACAAAATGACCTCAAAGC
TACTGCCCGGAAACATTGTGTACGGAGGTCCTGTGACTGAACGACAGGCC
CAGGATAGCAGATCCTTGGGTCAGTACATCCTCGACAAGTACAAGAGCTT
TGGCGACCGGACGGTGCTGGTGGATGCCGTCAATGGAGTGGAGTACTCTG
CCAGTTTCATGCACAAGTCCATTGTACGGCTGGCATACATCCTTCAAAAA
CTGGGAGTCAAACAGAATGACGTCGTTGGTTTGTCTAGCGAAAACAGCGT
CAACTTCGCCCTGGCCATGTTCGCTGGTCTAGCAGTTGGGGCTACGGTTG
CTCCCCTTAACGTAACATATTCCGATCGTGAGGTGGACCACGCCATTAAC
TTGTCCAAGCCAAAGATCATATTCGCCTCTAAGATTACCATTGATCGTGT
TGCCAAAGTGGCCAGCAAGAATAAGTTCGTCAAGGGCATCATTGCGCTCA
GTGGAACTTCCAAGAAATTTAAGAACATCTATGATCTTAAGGAGCTGATG
GAGGACGAGAAGTTCAAGACACAGCCTGACTTCACGAGCCCTGCGGCCAA
TAAGGACGAGGACGTGTCTCTTATTGTGTGCTCTTCTGGAACCACCGGAC
TTCCTAAAGGAGTGCAGCTGACCCAAATGAACCTGCTGGCCACTCTCGAC
TCACAAATCCAACCCACTGTCATTCCAATGGAGGAGGTCACTCTACTCAC
TGTCATTCCCTGGTTCCACGCCTTCGGCTGTCTGACGCTTATCACCACCG
CCTGCGTTGGCGCACGATTGGTATACCTGCCCAAGTTCGAGGAAAAGCTC
TTCCTTTCTGCCATTGAAAAGTATCGCGTGATGATGGCCTTCATGGTGCC
ACCACTGATGGTCTTTTTGGCTAAACACCCCATCGTGGATAAGTACGATT
TGTCCTCTTTGATGGTCCTGCTGTGTGGAGCAGCTCCACTCAGTCGCGAA
ACTGAGGATCAGATCAAGGAGCGTATTGGAGTGCCATTCATCCGACAGGG
ATACGGCCTCAGCGAATCAACGCTGAGTGTTCTGGTGCAGAACGATGAGT
TCTGCAAGCCAGGCAGTGTGGGCGTTCTTAAGGTGGGAATCTATGCCAAG
GTGATCGATCCCGACACCGGCAAGCTATTGGGGGCCAACGAGCGCGGCGA
GCTTTGTTTTAAAGGCGACGGCATCATGAAGGGCTACATCGGAGATACGA
AGTCCACGCAGACCGCCATCAAGGACGGTTGGTTGCATACTGGCGATATT
GGCTACTATGATGATGATTTTGAGTTCTTCATCGTGGACCGCATCAAGGA
GCTGATCAAATACAAGGGATACCAGGTGCCGCCGGCAGAGATTGAGGCTC
TGCTGCTCACCAACGACAAGATTAAGGATGCGGCGGTCATTGGAAAGCCA
GACGAGGAGGCTGGCGAGCTGCCGCTGGCATTTGTGGTCAAACAGGCTAA
TGTTCAACTGACCGAGAACGAAGTCATTCAGTTTGTCAACGACAACGCCT
CGCCCGCCAAGCGTCTAAGGGGTGGCGTGATCTTTGTTGACGAAATTCCA
AAGAACCCCAGTGGCAAGATTCTGCGTCGCATTCTGCGGGAAATGCTTAA
GAAGCAAAAATCCAAGTTGTAAGGGATTTCTCCCCTTAAGGGTGTGTGTA
CAAACAATTTACTATGTGTATGTTTTATTATTGCTAAACTTTGTTTTATA
AACTACCAACTGGTTGGGTTTCGATTTACTCAAAAAAAAAAAAAAAAAA

GM05240.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:07:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG6178-RA 2249 CG6178-RA 61..2042 1..1982 9895 99.9 Plus
CG6178.f 2096 CG6178.f 346..2096 231..1981 8740 99.9 Plus
CG6178.b 1986 CG6178.b 236..1986 231..1981 8740 99.9 Plus
CG6178.f 2096 CG6178.f 61..290 1..230 1150 100 Plus
CG6178.b 1986 CG6178.b 61..235 1..175 875 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:54:47
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 19977151..19978223 909..1981 5365 100 Plus
chr3R 27901430 chr3R 19976417..19977094 231..908 3375 99.9 Plus
chr3R 27901430 chr3R 19975701..19975930 1..230 1150 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:17:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:54:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24153824..24154897 909..1982 5370 100 Plus
3R 32079331 3R 24153090..24153767 231..908 3375 99.9 Plus
3R 32079331 3R 24152374..24152603 1..230 1150 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:31:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 23894655..23895728 909..1982 5370 100 Plus
3R 31820162 3R 23893921..23894598 231..908 3375 99.8 Plus
3R 31820162 3R 23893205..23893434 1..230 1150 100 Plus
Blast to na_te.dros performed on 2019-03-16 02:54:46 has no hits.

GM05240.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:55:48 Download gff for GM05240.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 19975701..19975930 1..230 100 -> Plus
chr3R 19976417..19977094 231..908 99 -> Plus
chr3R 19977151..19978223 909..1981 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:04:01 Download gff for GM05240.complete
Subject Subject Range Query Range Percent Splice Strand
CG6178-RA 1..1635 238..1872 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:44:00 Download gff for GM05240.complete
Subject Subject Range Query Range Percent Splice Strand
CG6178-RA 1..1635 238..1872 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:01:55 Download gff for GM05240.complete
Subject Subject Range Query Range Percent Splice Strand
CG6178-RA 1..1635 238..1872 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:12:50 Download gff for GM05240.complete
Subject Subject Range Query Range Percent Splice Strand
CG6178-RA 1..1635 238..1872 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:24:35 Download gff for GM05240.complete
Subject Subject Range Query Range Percent Splice Strand
CG6178-RA 1..1635 238..1872 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:26:43 Download gff for GM05240.complete
Subject Subject Range Query Range Percent Splice Strand
CG6178-RA 61..2041 1..1981 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:44:00 Download gff for GM05240.complete
Subject Subject Range Query Range Percent Splice Strand
CG6178-RA 61..2041 1..1981 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:01:55 Download gff for GM05240.complete
Subject Subject Range Query Range Percent Splice Strand
CG6178-RA 28..2008 1..1981 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:12:50 Download gff for GM05240.complete
Subject Subject Range Query Range Percent Splice Strand
CG6178-RA 61..2041 1..1981 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:24:35 Download gff for GM05240.complete
Subject Subject Range Query Range Percent Splice Strand
CG6178-RA 28..2008 1..1981 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:55:48 Download gff for GM05240.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24152374..24152603 1..230 100 -> Plus
3R 24153090..24153767 231..908 99 -> Plus
3R 24153824..24154896 909..1981 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:55:48 Download gff for GM05240.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24152374..24152603 1..230 100 -> Plus
3R 24153090..24153767 231..908 99 -> Plus
3R 24153824..24154896 909..1981 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:55:48 Download gff for GM05240.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24152374..24152603 1..230 100 -> Plus
3R 24153090..24153767 231..908 99 -> Plus
3R 24153824..24154896 909..1981 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:01:55 Download gff for GM05240.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19978096..19978325 1..230 100 -> Plus
arm_3R 19978812..19979489 231..908 99 -> Plus
arm_3R 19979546..19980618 909..1981 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:49:22 Download gff for GM05240.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23893205..23893434 1..230 100 -> Plus
3R 23893921..23894598 231..908 99 -> Plus
3R 23894655..23895727 909..1981 100   Plus

GM05240.pep Sequence

Translation from 237 to 1871

> GM05240.pep
MTSKLLPGNIVYGGPVTERQAQDSRSLGQYILDKYKSFGDRTVLVDAVNG
VEYSASFMHKSIVRLAYILQKLGVKQNDVVGLSSENSVNFALAMFAGLAV
GATVAPLNVTYSDREVDHAINLSKPKIIFASKITIDRVAKVASKNKFVKG
IIALSGTSKKFKNIYDLKELMEDEKFKTQPDFTSPAANKDEDVSLIVCSS
GTTGLPKGVQLTQMNLLATLDSQIQPTVIPMEEVTLLTVIPWFHAFGCLT
LITTACVGARLVYLPKFEEKLFLSAIEKYRVMMAFMVPPLMVFLAKHPIV
DKYDLSSLMVLLCGAAPLSRETEDQIKERIGVPFIRQGYGLSESTLSVLV
QNDEFCKPGSVGVLKVGIYAKVIDPDTGKLLGANERGELCFKGDGIMKGY
IGDTKSTQTAIKDGWLHTGDIGYYDDDFEFFIVDRIKELIKYKGYQVPPA
EIEALLLTNDKIKDAAVIGKPDEEAGELPLAFVVKQANVQLTENEVIQFV
NDNASPAKRLRGGVIFVDEIPKNPSGKILRRILREMLKKQKSKL*

GM05240.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:50:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16109-PA 545 GF16109-PA 1..545 1..544 2702 93.4 Plus
Dana\GF19420-PA 598 GF19420-PA 77..594 26..535 738 32.8 Plus
Dana\GF17741-PA 533 GF17741-PA 11..527 8..537 559 29.1 Plus
Dana\GF12065-PA 536 GF12065-PA 26..533 23..542 548 29.4 Plus
Dana\GF17616-PA 537 GF17616-PA 30..523 26..530 507 27.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:50:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11260-PA 544 GG11260-PA 1..544 1..544 2750 95.2 Plus
Dere\GG19427-PA 597 GG19427-PA 77..593 27..535 721 32.7 Plus
Dere\GG17154-PA 534 GG17154-PA 12..527 9..537 525 28.9 Plus
Dere\GG20824-PA 543 GG20824-PA 12..543 11..544 511 29.1 Plus
Dere\GG22584-PA 535 GG22584-PA 26..531 23..541 496 27.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:50:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18499-PA 544 GH18499-PA 1..544 1..544 2520 85.7 Plus
Dgri\GH18500-PA 544 GH18500-PA 1..544 1..544 2499 84.6 Plus
Dgri\GH11952-PA 597 GH11952-PA 77..593 27..535 699 33.7 Plus
Dgri\GH20894-PA 534 GH20894-PA 24..532 19..540 504 27.6 Plus
Dgri\GH15631-PA 537 GH15631-PA 15..523 11..530 484 27 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:13:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG6178-PA 544 CG6178-PA 1..544 1..544 2756 100 Plus
pdgy-PC 597 CG9009-PC 77..593 27..535 705 32.3 Plus
pdgy-PB 597 CG9009-PB 77..593 27..535 705 32.3 Plus
pdgy-PD 597 CG9009-PD 77..593 27..535 705 32.3 Plus
pdgy-PA 597 CG9009-PA 77..593 27..535 705 32.3 Plus
CG4830-PA 534 CG4830-PA 12..526 9..536 534 29.1 Plus
CG4563-PA 537 CG4563-PA 17..533 11..541 507 26.9 Plus
CG9993-PA 543 CG9993-PA 12..543 11..544 492 28.9 Plus
CG11407-PA 538 CG11407-PA 15..535 11..542 488 26.3 Plus
CG8834-PA 535 CG8834-PA 29..526 26..536 478 28.2 Plus
CG6300-PA 537 CG6300-PA 15..523 11..530 474 26.9 Plus
CG17999-PA 545 CG17999-PA 28..543 26..543 472 26.5 Plus
CG11659-PA 546 CG11659-PA 15..523 11..530 470 27.1 Plus
CG18586-PC 536 CG18586-PC 44..531 38..539 451 27.3 Plus
CG18586-PB 545 CG18586-PB 70..540 58..539 447 27.8 Plus
CG11453-PA 539 CG11453-PA 66..531 63..541 440 27.2 Plus
CG5568-PA 545 CG5568-PA 38..531 26..530 433 25.9 Plus
CG11391-PA 542 CG11391-PA 14..532 7..534 424 26.3 Plus
CG12512-PA 593 CG12512-PA 47..588 25..544 380 27.9 Plus
Acsl-PC 707 CG8732-PC 142..617 69..488 242 24.9 Plus
Acsl-PF 707 CG8732-PF 142..617 69..488 242 24.9 Plus
Acsl-PI 707 CG8732-PI 142..617 69..488 242 24.9 Plus
Acsl-PG 707 CG8732-PG 142..617 69..488 242 24.9 Plus
Acsl-PB 715 CG8732-PB 150..625 69..488 242 24.9 Plus
Acsl-PH 715 CG8732-PH 150..625 69..488 242 24.9 Plus
Acsl-PA 715 CG8732-PA 150..625 69..488 242 24.9 Plus
Acsl-PE 715 CG8732-PE 150..625 69..488 242 24.9 Plus
Acsl-PD 717 CG8732-PD 152..627 69..488 242 24.9 Plus
Acsl-PJ 728 CG8732-PJ 163..638 69..488 242 24.9 Plus
hll-PA 681 CG4500-PA 79..528 62..456 238 22.4 Plus
CG6432-PB 674 CG6432-PB 115..635 58..541 228 22.8 Plus
CG6432-PA 674 CG6432-PA 115..635 58..541 228 22.8 Plus
bgm-PC 666 CG4501-PC 84..547 60..470 224 23.5 Plus
bgm-PA 666 CG4501-PA 84..547 60..470 224 23.5 Plus
Fatp1-PB 626 CG46149-PB 93..522 64..469 203 24 Plus
Fatp1-PA 626 CG46149-PA 93..522 64..469 203 24 Plus
Fatp1-PE 626 CG46149-PE 93..522 64..469 203 24 Plus
Fatp1-PF 746 CG46149-PF 213..642 64..469 203 24 Plus
CG3961-PD 654 CG3961-PD 225..574 191..496 181 24.9 Plus
CG3961-PE 666 CG3961-PE 237..586 191..496 181 24.9 Plus
CG3961-PC 704 CG3961-PC 275..624 191..496 181 24.9 Plus
CG3961-PA 704 CG3961-PA 275..624 191..496 181 24.9 Plus
AcCoAS-PD 670 CG9390-PD 123..639 60..536 178 22.6 Plus
AcCoAS-PA 670 CG9390-PA 123..639 60..536 178 22.6 Plus
AcCoAS-PB 524 CG9390-PB 114..493 169..536 176 24.8 Plus
Fatp2-PB 703 CG44252-PB 165..640 64..506 174 21.6 Plus
Fatp2-PD 714 CG44252-PD 176..651 64..506 174 21.6 Plus
Fatp2-PE 714 CG44252-PE 176..651 64..506 174 21.6 Plus
Fatp3-PB 661 CG3394-PB 124..620 64..533 168 21.3 Plus
Fatp3-PA 687 CG3394-PA 150..646 64..533 168 21.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:50:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24173-PA 544 GI24173-PA 1..544 1..544 2481 83.6 Plus
Dmoj\GI15371-PA 576 GI15371-PA 81..572 52..535 679 33.1 Plus
Dmoj\GI20482-PA 532 GI20482-PA 29..530 26..540 512 29.1 Plus
Dmoj\GI18904-PA 534 GI18904-PA 32..530 26..538 506 27.7 Plus
Dmoj\GI19829-PA 544 GI19829-PA 12..538 11..540 502 28.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:50:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23410-PA 544 GL23410-PA 1..544 1..544 2659 90.4 Plus
Dper\GL27076-PA 536 GL27076-PA 26..531 26..534 693 33 Plus
Dper\GL21570-PA 533 GL21570-PA 29..527 26..537 520 28.2 Plus
Dper\GL21628-PA 546 GL21628-PA 67..526 63..531 484 29.5 Plus
Dper\GL22127-PA 545 GL22127-PA 30..525 26..531 480 29.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:50:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19414-PA 544 GA19414-PA 1..544 1..544 2658 90.3 Plus
Dpse\GA21474-PA 596 GA21474-PA 77..591 27..534 726 33.2 Plus
Dpse\GA18463-PA 533 GA18463-PA 29..527 26..537 520 28.2 Plus
Dpse\GA27415-PA 548 GA27415-PA 67..526 63..530 498 29.5 Plus
Dpse\GA26350-PA 546 GA26350-PA 67..526 63..531 484 28.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:50:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26565-PA 280 GM26565-PA 1..273 1..273 1381 95.2 Plus
Dsec\GM26566-PA 262 GM26566-PA 1..262 283..544 1377 99.2 Plus
Dsec\GM12014-PA 686 GM12014-PA 191..682 52..535 690 32.9 Plus
Dsec\GM20364-PA 535 GM20364-PA 10..534 7..544 545 29.1 Plus
Dsec\GM26036-PA 534 GM26036-PA 12..527 9..537 535 29.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:50:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21070-PA 544 GD21070-PA 1..544 1..544 2814 97.6 Plus
Dsim\GD15826-PA 600 GD15826-PA 77..596 27..535 721 32.9 Plus
Dsim\GD25844-PA 534 GD25844-PA 10..531 7..541 546 28.7 Plus
Dsim\GD25845-PA 535 GD25845-PA 10..534 7..544 530 28.1 Plus
Dsim\GD24951-PA 537 GD24951-PA 17..533 11..541 508 27.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:50:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14206-PA 544 GJ14206-PA 1..544 1..544 2526 86.2 Plus
Dvir\GJ16795-PA 593 GJ16795-PA 73..589 27..535 680 32.4 Plus
Dvir\GJ10986-PA 537 GJ10986-PA 62..524 58..531 495 28.6 Plus
Dvir\GJ18629-PA 544 GJ18629-PA 12..538 11..540 493 29.5 Plus
Dvir\GJ10987-PA 537 GJ10987-PA 62..536 58..543 491 28.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:50:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13972-PA 544 GK13972-PA 1..544 1..544 2629 89.7 Plus
Dwil\GK19734-PA 854 GK19734-PA 77..592 27..534 720 33.1 Plus
Dwil\GK12124-PA 540 GK12124-PA 26..533 22..541 509 30.3 Plus
Dwil\GK22879-PA 543 GK22879-PA 12..543 11..544 490 28.8 Plus
Dwil\GK22353-PA 533 GK22353-PA 13..523 9..530 482 27.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:50:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23452-PA 544 GE23452-PA 1..544 1..544 2779 95.6 Plus
Dyak\GE16079-PA 597 GE16079-PA 77..593 27..535 718 32.7 Plus
Dyak\GE13453-PA 535 GE13453-PA 14..531 11..541 547 29.1 Plus
Dyak\GE24544-PA 534 GE24544-PA 12..527 9..537 524 29.1 Plus
Dyak\GE11456-PA 537 GE11456-PA 17..533 11..541 499 26.4 Plus

GM05240.hyp Sequence

Translation from 237 to 1871

> GM05240.hyp
MTSKLLPGNIVYGGPVTERQAQDSRSLGQYILDKYKSFGDRTVLVDAVNG
VEYSASFMHKSIVRLAYILQKLGVKQNDVVGLSSENSVNFALAMFAGLAV
GATVAPLNVTYSDREVDHAINLSKPKIIFASKITIDRVAKVASKNKFVKG
IIALSGTSKKFKNIYDLKELMEDEKFKTQPDFTSPAANKDEDVSLIVCSS
GTTGLPKGVQLTQMNLLATLDSQIQPTVIPMEEVTLLTVIPWFHAFGCLT
LITTACVGARLVYLPKFEEKLFLSAIEKYRVMMAFMVPPLMVFLAKHPIV
DKYDLSSLMVLLCGAAPLSRETEDQIKERIGVPFIRQGYGLSESTLSVLV
QNDEFCKPGSVGVLKVGIYAKVIDPDTGKLLGANERGELCFKGDGIMKGY
IGDTKSTQTAIKDGWLHTGDIGYYDDDFEFFIVDRIKELIKYKGYQVPPA
EIEALLLTNDKIKDAAVIGKPDEEAGELPLAFVVKQANVQLTENEVIQFV
NDNASPAKRLRGGVIFVDEIPKNPSGKILRRILREMLKKQKSKL*

GM05240.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 09:46:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG6178-PA 544 CG6178-PA 1..544 1..544 2756 100 Plus
pdgy-PC 597 CG9009-PC 77..593 27..535 705 32.3 Plus
pdgy-PB 597 CG9009-PB 77..593 27..535 705 32.3 Plus
pdgy-PD 597 CG9009-PD 77..593 27..535 705 32.3 Plus
pdgy-PA 597 CG9009-PA 77..593 27..535 705 32.3 Plus