BDGP Sequence Production Resources |
Search the DGRC for GM06145
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 61 |
Well: | 45 |
Vector: | pBS SK- |
Associated Gene/Transcript | SppL-RD |
Protein status: | GM06145.pep: gold |
Preliminary Size: | 2071 |
Sequenced Size: | 2111 |
Gene | Date | Evidence |
---|---|---|
CG17370 | 2002-11-22 | Blastp of sequenced clone |
CG17370 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17370 | 2008-04-29 | Release 5.5 accounting |
CG17370 | 2008-08-15 | Release 5.9 accounting |
CG17370 | 2008-12-18 | 5.12 accounting |
2111 bp (2111 high quality bases) assembled on 2002-11-22
GenBank Submission: BT003288
> GM06145.complete AAAGCGTGAAATGTTTAATTCGTTGTTGTTTCTCCTCCGCAATAGTTACT AATAGAAACAAATGCAAAATGGCTGTCTAACGTTTAAGTGCAGCGACCGC CGAAGATCGTGGAAATATGCATGAAAAGCGGCTCGCAGGCAAATGAAAGG CGCGTGAAAATGTAGCAGACACCTTTTTATCGCGAAAACGAACATCGGTG CAAAGGGAAAAACAAAAACCAAGGAAAATACAGCCAAACGCGAATGTGAA TGTGAAGGCAAAAGTGTGTATGGCGTTCTAATTTGCTTTCATTACCTAAT TCGTGAGGCGCGTGAAAGTTGACCCCAAGGTTTCCGCGCTCGACTTAAGG CGACATCGTGGAAAATAAACCTTGGGAGTGAGTGTGTGCTCCGAATAGCC TAATCGCAGTTGTCCAAATAACCTGAAGAAGGTAAAAAAGTATACGGGGT TACGTGCGATAAGTTTGGATTGAAGCGGTGCAGCTGACATAGGAACGCGA TAAACCCAGCGCAGGACGACCGATAAGCGAAGAAGCCAGCCGACTGGCGA CTACAAGTGATATCTGAAACTATATCTGCGATATAGATTGAAGTCGCATC CGGAGGAACCGGAGCGAGCATGTCGCACGGTGGAGCCGGTGGCGGTCTGG GAGCTCAAACTGTTGGAGCCGGCCAACTTGGAGGCGGTGCAGCGGCAGCT GGCGGTGGAGAATACCGCGAACTCCACTGGACGGTCTCAAGCGTAATGGA CTCGTCTCGGGTCTCCACCTGCCTCATATCAATGCTGCTGATAGTCTACG GCAGCTTTCGCTCCTTAAACATCGAGCAGGAGGCCCGCGAGCGGGAGCAG AAGAAGCGAAATGAATCGATGACCAATCTTCTTACCGGCGAGCCCGTCGA GAAGGAACCAAATCTGTATTTCACAGCGGATAAATTCGCCACTCTGGACA CGATGCATGCCCTCTGTTTGCCTCTCGGAGCTTCCATCTCACTGCTCATC ATGTTCTTCTTCTTCGACTCGATGCAGCTGCTCTTCGCCGTCTGCACAGC GATTATAGCCACCGTGGCGCTGGCCTTTCTGCTGCTGCCCATGTGCCAGT ACATCATCAGGCCATGCACAGATGGAAAGCGATTCTCCTTCGGATTCTGC GGTCGCTTCACAGCCGCGGAGCTCTTCAGCTTTACGCTTTCGGTATCGAT TGTGTGCATATGGGTGCTCACTGGCCACTGGCTGCTAATGGATGCAATGG GCATGGGCCTGTGTGTGGCATTCATAGCGTTTGTGCGTCTGCCCAGCTTG AAGGTGTCCACGCTGCTGTTGACCGGCCTGCTCATCTACGACGTCTTCTG GGTATTCCTCTCCTCGTACATCTTCAGCACTAACGTGATGGTCAAGGTGG CGACGCGACCCGCCGATAATCCCGTGGGCATCGTGGCCAGAAAGTTGCAT CTGGGTGGCATTGTGCGGGACACACCAAAGCTGAATCTGCCCGGAAAGCT TGTTTTTCCCAGCCTGCACAATACCGGTCACTTCTCTATGCTGGGCCTGG GTGATGTGGTGATGCCGGGCCTGTTGCTCTGCTTCGTCTTGCGGTATGAT GCGTACAAGAAGGCGCAGGGCGTCACATCGGATCCCACATTGTCACCGCC CAGAGGAGTTGGCTCCCGGTTGACATACTTTCATTGTTCCTTATTGGGTT ATTTCTTGGGCCTGCTAACGGCGACGGTCAGCTCCGAGGTCTTTAAGGCG GCCCAGCCGGCGCTGCTGTATCTAGTGCCCTTTACGTTATTGCCGCTCTT GCTGATGGCCTATCTGAAGGGCGACCTGCGGCGCATGTGGAGCGAGCCGT TTATCGCGCAACAACCATCAAAACAACTGGAAGTCTGAGTGTACTCTATC TAAAAGCAAAGAAAAACAAAAAACCAACAGCATACAATGTGAAGAACACA CACACATAAGATCTAATACTAACGTTTGTCTCTTAAATAACGTATTGAGT ATGTATTTTTTAACTCAACTTAACTAAGTTTCGTTTTAAGTTAGGTGATC CTCGTTTTCATAGTGAAATAAAAGCAAAAACCGAGTAAAAAAAAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17370.f | 2847 | CG17370.f | 30..2117 | 1..2088 | 10305 | 99.5 | Plus |
CG17370-RD | 2371 | CG17370-RD | 30..2117 | 1..2088 | 10305 | 99.5 | Plus |
CG17370-RB | 2225 | CG17370-RB | 941..2102 | 927..2088 | 5735 | 99.5 | Plus |
CG17370-RB | 2225 | CG17370-RB | 30..940 | 1..911 | 4495 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 21709532..21709986 | 1244..1698 | 2260 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 21708346..21708795 | 462..911 | 2220 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 21710263..21710531 | 1818..2086 | 1345 | 100 | Plus |
chr3R | 27901430 | chr3R | 21704986..21705246 | 1..262 | 1260 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 21708084..21708285 | 263..463 | 960 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 21709273..21709464 | 1053..1244 | 960 | 100 | Plus |
chr3R | 27901430 | chr3R | 21708846..21708986 | 912..1052 | 630 | 96.5 | Plus |
chr3R | 27901430 | chr3R | 21710077..21710199 | 1698..1820 | 615 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 25886565..25887019 | 1244..1698 | 2230 | 99.3 | Plus |
3R | 32079331 | 3R | 25885380..25885829 | 462..911 | 2190 | 99.1 | Plus |
3R | 32079331 | 3R | 25887296..25887566 | 1818..2088 | 1355 | 100 | Plus |
3R | 32079331 | 3R | 25882014..25882275 | 1..262 | 1310 | 100 | Plus |
3R | 32079331 | 3R | 25885119..25885319 | 263..463 | 1005 | 100 | Plus |
3R | 32079331 | 3R | 25886307..25886498 | 1053..1244 | 960 | 100 | Plus |
3R | 32079331 | 3R | 25885880..25886020 | 912..1052 | 690 | 99.3 | Plus |
3R | 32079331 | 3R | 25887110..25887232 | 1698..1820 | 600 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 25627396..25627850 | 1244..1698 | 2230 | 99.3 | Plus |
3R | 31820162 | 3R | 25626211..25626660 | 462..911 | 2190 | 99.1 | Plus |
3R | 31820162 | 3R | 25628127..25628397 | 1818..2088 | 1355 | 100 | Plus |
3R | 31820162 | 3R | 25622845..25623106 | 1..262 | 1310 | 100 | Plus |
3R | 31820162 | 3R | 25625950..25626150 | 263..463 | 1005 | 100 | Plus |
3R | 31820162 | 3R | 25627138..25627329 | 1053..1244 | 960 | 100 | Plus |
3R | 31820162 | 3R | 25626711..25626851 | 912..1052 | 690 | 99.2 | Plus |
3R | 31820162 | 3R | 25627941..25628063 | 1698..1820 | 600 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 1232..1328 | 1860..1957 | 127 | 60.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21704986..21705246 | 1..262 | 99 | -> | Plus |
chr3R | 21708084..21708285 | 263..463 | 99 | -> | Plus |
chr3R | 21708348..21708795 | 464..911 | 99 | -> | Plus |
chr3R | 21708846..21708986 | 912..1052 | 96 | -> | Plus |
chr3R | 21709273..21709464 | 1053..1244 | 100 | -> | Plus |
chr3R | 21709533..21709986 | 1245..1698 | 99 | -> | Plus |
chr3R | 21710078..21710198 | 1699..1819 | 100 | -> | Plus |
chr3R | 21710265..21710531 | 1820..2086 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17370-RC | 1..289 | 620..908 | 99 | == | Plus |
CG17370-RC | 290..1254 | 924..1888 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17370-RE | 1..1269 | 620..1888 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SppL-RD | 1..1269 | 620..1888 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17370-RC | 1..289 | 620..908 | 99 | == | Plus |
CG17370-RC | 290..1254 | 924..1888 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SppL-RD | 1..1269 | 620..1888 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17370-RA | 287..736 | 456..908 | 98 | == | Plus |
CG17370-RA | 737..1899 | 924..2086 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17370-RD | 30..2115 | 1..2086 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SppL-RD | 31..2116 | 1..2086 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17370-RC | 41..492 | 455..908 | 98 | == | Plus |
CG17370-RC | 493..1655 | 924..2086 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SppL-RD | 31..2116 | 1..2086 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25885382..25885829 | 464..911 | 99 | -> | Plus |
3R | 25885880..25886020 | 912..1052 | 99 | -> | Plus |
3R | 25886307..25886498 | 1053..1244 | 100 | -> | Plus |
3R | 25882014..25882275 | 1..262 | 100 | -> | Plus |
3R | 25885119..25885319 | 263..463 | 100 | -> | Plus |
3R | 25886566..25887019 | 1245..1698 | 99 | -> | Plus |
3R | 25887111..25887231 | 1699..1819 | 99 | -> | Plus |
3R | 25887298..25887564 | 1820..2086 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25885382..25885829 | 464..911 | 99 | -> | Plus |
3R | 25885880..25886020 | 912..1052 | 99 | -> | Plus |
3R | 25886307..25886498 | 1053..1244 | 100 | -> | Plus |
3R | 25882014..25882275 | 1..262 | 100 | -> | Plus |
3R | 25885119..25885319 | 263..463 | 100 | -> | Plus |
3R | 25886566..25887019 | 1245..1698 | 99 | -> | Plus |
3R | 25887111..25887231 | 1699..1819 | 99 | -> | Plus |
3R | 25887298..25887564 | 1820..2086 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25885382..25885829 | 464..911 | 99 | -> | Plus |
3R | 25885880..25886020 | 912..1052 | 99 | -> | Plus |
3R | 25886307..25886498 | 1053..1244 | 100 | -> | Plus |
3R | 25882014..25882275 | 1..262 | 100 | -> | Plus |
3R | 25885119..25885319 | 263..463 | 100 | -> | Plus |
3R | 25886566..25887019 | 1245..1698 | 99 | -> | Plus |
3R | 25887111..25887231 | 1699..1819 | 99 | -> | Plus |
3R | 25887298..25887564 | 1820..2086 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21707736..21707997 | 1..262 | 100 | -> | Plus |
arm_3R | 21710841..21711041 | 263..463 | 100 | -> | Plus |
arm_3R | 21711104..21711551 | 464..911 | 99 | -> | Plus |
arm_3R | 21711602..21711742 | 912..1052 | 99 | -> | Plus |
arm_3R | 21712029..21712220 | 1053..1244 | 100 | -> | Plus |
arm_3R | 21712288..21712741 | 1245..1698 | 99 | -> | Plus |
arm_3R | 21712833..21712953 | 1699..1819 | 99 | -> | Plus |
arm_3R | 21713020..21713286 | 1820..2086 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25627138..25627329 | 1053..1244 | 100 | -> | Plus |
3R | 25626711..25626851 | 912..1052 | 99 | -> | Plus |
3R | 25622845..25623106 | 1..262 | 100 | -> | Plus |
3R | 25625950..25626150 | 263..463 | 100 | -> | Plus |
3R | 25626213..25626660 | 464..911 | 99 | -> | Plus |
3R | 25627397..25627850 | 1245..1698 | 99 | -> | Plus |
3R | 25627942..25628062 | 1699..1819 | 99 | -> | Plus |
3R | 25628129..25628395 | 1820..2086 | 100 | Plus |
Translation from 619 to 1887
> GM06145.pep MSHGGAGGGLGAQTVGAGQLGGGAAAAGGGEYRELHWTVSSVMDSSRVST CLISMLLIVYGSFRSLNIEQEAREREQKKRNESMTNLLTGEPVEKEPNLY FTADKFATLDTMHALCLPLGASISLLIMFFFFDSMQLLFAVCTAIIATVA LAFLLLPMCQYIIRPCTDGKRFSFGFCGRFTAAELFSFTLSVSIVCIWVL TGHWLLMDAMGMGLCVAFIAFVRLPSLKVSTLLLTGLLIYDVFWVFLSSY IFSTNVMVKVATRPADNPVGIVARKLHLGGIVRDTPKLNLPGKLVFPSLH NTGHFSMLGLGDVVMPGLLLCFVLRYDAYKKAQGVTSDPTLSPPRGVGSR LTYFHCSLLGYFLGLLTATVSSEVFKAAQPALLYLVPFTLLPLLLMAYLK GDLRRMWSEPFIAQQPSKQLEV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16778-PA | 435 | GF16778-PA | 49..435 | 31..422 | 1947 | 96.2 | Plus |
Dana\GF24718-PA | 389 | GF24718-PA | 46..354 | 49..408 | 325 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11430-PA | 417 | GG11430-PA | 1..417 | 1..422 | 2171 | 98.6 | Plus |
Dere\GG24644-PA | 389 | GG24644-PA | 40..354 | 43..408 | 325 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22306-PA | 424 | GH22306-PA | 36..424 | 29..422 | 1945 | 95.4 | Plus |
Dgri\GH10510-PA | 390 | GH10510-PA | 47..355 | 49..408 | 328 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SppL-PE | 422 | CG17370-PE | 1..422 | 1..422 | 2175 | 100 | Plus |
SppL-PD | 422 | CG17370-PD | 1..422 | 1..422 | 2175 | 100 | Plus |
SppL-PF | 417 | CG17370-PF | 1..417 | 1..422 | 2127 | 98.6 | Plus |
SppL-PC | 417 | CG17370-PC | 1..417 | 1..422 | 2127 | 98.6 | Plus |
SppL-PB | 417 | CG17370-PB | 1..417 | 1..422 | 2127 | 98.6 | Plus |
SppL-PA | 417 | CG17370-PA | 1..417 | 1..422 | 2127 | 98.6 | Plus |
Spp-PA | 389 | CG11840-PA | 46..366 | 49..419 | 329 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22975-PA | 422 | GI22975-PA | 35..422 | 30..422 | 1933 | 95.2 | Plus |
Dmoj\GI18028-PA | 391 | GI18028-PA | 47..355 | 49..408 | 326 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21795-PA | 434 | GL21795-PA | 46..434 | 29..422 | 1922 | 94.7 | Plus |
Dper\GL19257-PA | 391 | GL19257-PA | 48..356 | 49..408 | 319 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14486-PA | 432 | GA14486-PA | 44..432 | 29..422 | 1922 | 94.7 | Plus |
Dpse\GA11227-PA | 391 | GA11227-PA | 48..356 | 49..408 | 319 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10271-PA | 417 | GM10271-PA | 1..417 | 1..422 | 2171 | 98.6 | Plus |
Dsec\GM16661-PA | 376 | GM16661-PA | 40..341 | 43..408 | 314 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21240-PA | 417 | GD21240-PA | 1..417 | 1..422 | 2171 | 98.6 | Plus |
Dsim\GD22952-PA | 374 | GD22952-PA | 46..339 | 49..408 | 322 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22735-PA | 280 | GJ22735-PA | 41..280 | 31..275 | 1217 | 95.1 | Plus |
Dvir\GJ19708-PA | 398 | GJ19708-PA | 51..359 | 49..408 | 324 | 27.5 | Plus |
Translation from 619 to 1887
> GM06145.hyp MSHGGAGGGLGAQTVGAGQLGGGAAAAGGGEYRELHWTVSSVMDSSRVST CLISMLLIVYGSFRSLNIEQEAREREQKKRNESMTNLLTGEPVEKEPNLY FTADKFATLDTMHALCLPLGASISLLIMFFFFDSMQLLFAVCTAIIATVA LAFLLLPMCQYIIRPCTDGKRFSFGFCGRFTAAELFSFTLSVSIVCIWVL TGHWLLMDAMGMGLCVAFIAFVRLPSLKVSTLLLTGLLIYDVFWVFLSSY IFSTNVMVKVATRPADNPVGIVARKLHLGGIVRDTPKLNLPGKLVFPSLH NTGHFSMLGLGDVVMPGLLLCFVLRYDAYKKAQGVTSDPTLSPPRGVGSR LTYFHCSLLGYFLGLLTATVSSEVFKAAQPALLYLVPFTLLPLLLMAYLK GDLRRMWSEPFIAQQPSKQLEV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SppL-PE | 422 | CG17370-PE | 1..422 | 1..422 | 2175 | 100 | Plus |
SppL-PD | 422 | CG17370-PD | 1..422 | 1..422 | 2175 | 100 | Plus |
SppL-PF | 417 | CG17370-PF | 1..417 | 1..422 | 2127 | 98.6 | Plus |
SppL-PC | 417 | CG17370-PC | 1..417 | 1..422 | 2127 | 98.6 | Plus |
SppL-PB | 417 | CG17370-PB | 1..417 | 1..422 | 2127 | 98.6 | Plus |