BDGP Sequence Production Resources |
Search the DGRC for GM06185
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 61 |
Well: | 85 |
Vector: | pBS SK- |
Associated Gene/Transcript | mRpL50-RA |
Protein status: | GM06185.pep: gold |
Preliminary Size: | 910 |
Sequenced Size: | 717 |
Gene | Date | Evidence |
---|---|---|
CG14829 | 2001-01-01 | Release 2 assignment |
CG8612 | 2001-01-01 | Release 2 assignment |
CG8615 | 2001-01-01 | Release 2 assignment |
CG8612 | 2002-03-19 | Blastp of sequenced clone |
CG8612 | 2003-01-01 | Sim4 clustering to Release 3 |
mRpL50 | 2008-04-29 | Release 5.5 accounting |
mRpL50 | 2008-08-15 | Release 5.9 accounting |
mRpL50 | 2008-12-18 | 5.12 accounting |
717 bp (717 high quality bases) assembled on 2002-03-19
GenBank Submission: AY094750
> GM06185.complete CAATGGCAGCGATTTTACGTAAAACCCTAATTCTTGCGGGAAGCCTGCAT AGGAGTTTTGCCTCCGCCGCCAAGGCCGCAAAAGCAAAGCCCGTCAAAAC CAGCACCATTTCAGCTGTCGGCGAGTCCATCGCCGCCAAGGGCTTCTTGC GTCCCCATAAGCCGTACTCCCCACCTGCAGATGCCGCCGAACGTATTCGA ACCGTAGCCGCCTCGCTTCAACTGAAATCCGACCAGTTGGGGAATCTCTC CGAGAAATTCGAATTCCTGAACGCGTGCTTCCAGGAGCTGCAGCACGGAG TGCCCAACTCCCAGGTACATGAACTGCGCACCGTCAGCGATGTTATCGCT TTCTACCAAACAGCTGTGGACACCACCGTGCCGTTTGATGCACTGAAGCG CATCGAGCTGCCGGAGAATTTGCACATCCAGTACGAGTACGTGCGATTCC ATCCCGAGACAGATACCAAATTCGACGGCAAAACGGCTTTCCCCAAGAGC TCCACCCTAGTCACCGGTCTCAAGTACCGTGGAAAGTACGAGGGACACGA AGCCAAGCGATCCTGGCCTTAGAAACAGCCAATTGTTAGTTGTTAATGTC TTACACTTATTAAATGCATTCTGGAAGCCCGAGATTTACGTCATATATAT TAGGTATTACATTTATTAAATGTTAAATATGCTTAATGGCTAAAATTAAA AAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 7235239..7235793 | 143..697 | 100 | <- | Minus |
chr3L | 7235853..7235962 | 33..142 | 100 | <- | Minus |
chr3L | 7236019..7236050 | 1..32 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL50-RA | 1..570 | 3..572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL50-RA | 1..570 | 3..572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL50-RA | 1..570 | 3..572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL50-RA | 1..570 | 3..572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL50-RA | 1..570 | 3..572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL50-RA | 42..738 | 1..697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL50-RA | 42..738 | 1..697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL50-RA | 43..739 | 1..697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL50-RA | 42..738 | 1..697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL50-RA | 43..739 | 1..697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7243080..7243634 | 143..697 | 100 | <- | Minus |
3L | 7243694..7243803 | 33..142 | 100 | <- | Minus |
3L | 7243860..7243891 | 1..32 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7243080..7243634 | 143..697 | 100 | <- | Minus |
3L | 7243694..7243803 | 33..142 | 100 | <- | Minus |
3L | 7243860..7243891 | 1..32 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7243080..7243634 | 143..697 | 100 | <- | Minus |
3L | 7243694..7243803 | 33..142 | 100 | <- | Minus |
3L | 7243860..7243891 | 1..32 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 7236180..7236734 | 143..697 | 100 | <- | Minus |
arm_3L | 7236794..7236903 | 33..142 | 100 | <- | Minus |
arm_3L | 7236960..7236991 | 1..32 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7236960..7236991 | 1..32 | 100 | Minus | |
3L | 7236180..7236734 | 143..697 | 100 | <- | Minus |
3L | 7236794..7236903 | 33..142 | 100 | <- | Minus |
Translation from 2 to 571
> GM06185.hyp MAAILRKTLILAGSLHRSFASAAKAAKAKPVKTSTISAVGESIAAKGFLR PHKPYSPPADAAERIRTVAASLQLKSDQLGNLSEKFEFLNACFQELQHGV PNSQVHELRTVSDVIAFYQTAVDTTVPFDALKRIELPENLHIQYEYVRFH PETDTKFDGKTAFPKSSTLVTGLKYRGKYEGHEAKRSWP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL50-PA | 189 | CG8612-PA | 1..189 | 1..189 | 966 | 100 | Plus |
Translation from 2 to 571
> GM06185.pep MAAILRKTLILAGSLHRSFASAAKAAKAKPVKTSTISAVGESIAAKGFLR PHKPYSPPADAAERIRTVAASLQLKSDQLGNLSEKFEFLNACFQELQHGV PNSQVHELRTVSDVIAFYQTAVDTTVPFDALKRIELPENLHIQYEYVRFH PETDTKFDGKTAFPKSSTLVTGLKYRGKYEGHEAKRSWP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10571-PA | 189 | GF10571-PA | 1..189 | 1..189 | 865 | 82 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14988-PA | 189 | GG14988-PA | 1..189 | 1..189 | 899 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16299-PA | 193 | GH16299-PA | 1..193 | 1..189 | 682 | 66.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL50-PA | 189 | CG8612-PA | 1..189 | 1..189 | 966 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13240-PA | 193 | GI13240-PA | 1..193 | 1..189 | 714 | 69.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25235-PA | 191 | GL25235-PA | 1..191 | 1..189 | 801 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21207-PA | 191 | GA21207-PA | 1..191 | 1..189 | 801 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13784-PA | 189 | GM13784-PA | 1..189 | 1..189 | 973 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13081-PA | 189 | GD13081-PA | 1..189 | 1..189 | 971 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12013-PA | 193 | GJ12013-PA | 1..193 | 1..189 | 670 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25552-PA | 185 | GK25552-PA | 13..185 | 15..189 | 649 | 69.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20434-PA | 189 | GE20434-PA | 1..189 | 1..189 | 896 | 93.7 | Plus |