BDGP Sequence Production Resources |
Search the DGRC for GM06581
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 65 |
Well: | 81 |
Vector: | pBS SK- |
Associated Gene/Transcript | Fpps-RA |
Protein status: | GM06581.pep: gold |
Preliminary Size: | 1472 |
Sequenced Size: | 1482 |
Gene | Date | Evidence |
---|---|---|
CG12389 | 2001-01-01 | Release 2 assignment |
CG12389 | 2002-12-11 | Blastp of sequenced clone |
CG12389 | 2003-01-01 | Sim4 clustering to Release 3 |
Fpps | 2008-04-29 | Release 5.5 accounting |
Fpps | 2008-08-15 | Release 5.9 accounting |
Fpps | 2008-12-18 | 5.12 accounting |
1482 bp (1482 high quality bases) assembled on 2002-12-11
GenBank Submission: AF132554
> GM06581.complete TTCAGTCACACTGGCAATTTGGTACCCGAAGTTGAATTGCCGTTTTGTGA AGCGGATAGTTACCTGCCGATAATCTTAAATAAAAATGTTTAAACTGGCC CGTATGCTCCTGCCGCAGCAGCGGATCCTGGCCAGCCCGCTGCGCCTGCA ACGCCTGATCTCTACCAGCGACGAGGTCAACGCAGAGCCCATCATCAAGT CCATGGACACCATTGGCGGCCTCCCCACCGAACTGGTCAACGAACAGAAG CTGAAGAAGACTAGCAGAACCTTATCGACGCTCCAAAATCACTCGGTTCC CATTGCCGCTCGCGTCACGGTGTCGAAAGATGAGAGTCGCGACTTTATGG CCGTGTTCCCAGATCTTGTGCGTGACATCACCACCGTGACGAAGGCATAC AATTGCAGCGACGCAGCCAAATGGTTCGCCCAAGTCCTCCAGTACAATGT GCCCAGGGGCAAGAAGAACCGCGGCATCCTCACCGTGCTCACGTATAAGA ATCTAGTGCCCACCCAGGATCTTACGCCGGAGAACATAAAGCTCGCCCAG TATCTGGGCTGGTGCGTGGAAATGCTCCAAAGTTTTTTCATCATCTCAGA CGATGTGATGGACAACAGCACCACCAGACGCGGCCAACCCTGCTGGCACA AGGTGGAGAACGTGGGCCTGACTGCCATTAACGATGCTCTTATGATTGAA AACGCCATGTATGCCATTCTCAAGAAGCACTTCAGCCACTTGGACTGCTA TGTCGCCCTAATGGAGCTCTTCCACGAAATCACATACATCACTACCTGCG GACAATCGTTGGACCAACTGAACTCGAACCGCTGTGTCTCGGAATTCACA ATGGAAAACTACAAAGCAATTGTCGAAAATAAGACTGCCTATTACTCCTT CTACCTTCCATTCGCACTTGCTTTGCACTTGGCTGGCTATAAAGACGCAG AGGCCTTCCGTCAATCGAAGACCATTCTCCTAGAAATGGGCAACTTTTTC CAGGTTCAAGATGATTTTCTCGACTGCTTCGGTAATCCGGAAGTGACTGG TAAAATTGGAACCGACATTCAGGACAACAAGTGCTCGTGGCTGGCTGTGG TGGCTATGCAGCGAGCCAATGTCGAGCAAAAGCAAATCATGGTCGATTGC TATGGCAAAGAAGAACCAGCTAAAGTGGAGAGAGTGAAAGAACTGTACAA GGAACTTGGACTGCCATCCACCTATGCCATTTTCGAGGAGGAATCCTACA ACATGATTAAAACGCACATACAACAAACCTCACGCGGGGTGCCTCACCAG ACCTTCCTGCAAATACTCAACAAAATCTACCAACGTGACTCCTAAATTAC TCAAGCGCAACGACTTTACGGATACGTTTTTAATTAAATTGTAGTTTTAG CATTTACATGGATGAACTGTTAGCAAGGGCTCAGCAATTACAACCGATAT GAACTTTTTACTATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 7193599..7193961 | 936..574 | 1815 | 100 | Minus |
chr2R | 21145070 | chr2R | 7192951..7193253 | 1464..1162 | 1500 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 7194701..7194967 | 267..1 | 1335 | 100 | Minus |
chr2R | 21145070 | chr2R | 7193312..7193539 | 1163..936 | 1095 | 98.7 | Minus |
chr2R | 21145070 | chr2R | 7194020..7194234 | 574..360 | 1060 | 99.5 | Minus |
chr2R | 21145070 | chr2R | 7194305..7194402 | 362..265 | 490 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 11306159..11306521 | 936..574 | 1815 | 100 | Minus |
2R | 25286936 | 2R | 11305510..11305813 | 1465..1162 | 1505 | 99.7 | Minus |
2R | 25286936 | 2R | 11307261..11307527 | 267..1 | 1335 | 100 | Minus |
2R | 25286936 | 2R | 11305872..11306099 | 1163..936 | 1095 | 98.7 | Minus |
2R | 25286936 | 2R | 11306580..11306794 | 574..360 | 1060 | 99.5 | Minus |
2R | 25286936 | 2R | 11306865..11306962 | 362..265 | 490 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 11307358..11307720 | 936..574 | 1815 | 100 | Minus |
2R | 25260384 | 2R | 11306709..11307012 | 1465..1162 | 1505 | 99.6 | Minus |
2R | 25260384 | 2R | 11308460..11308726 | 267..1 | 1335 | 100 | Minus |
2R | 25260384 | 2R | 11307071..11307298 | 1163..936 | 1095 | 98.6 | Minus |
2R | 25260384 | 2R | 11307779..11307993 | 574..360 | 1060 | 99.5 | Minus |
2R | 25260384 | 2R | 11308064..11308161 | 362..265 | 490 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 7192951..7193251 | 1164..1464 | 99 | <- | Minus |
chr2R | 7193312..7193538 | 937..1163 | 98 | <- | Minus |
chr2R | 7193599..7193960 | 575..936 | 100 | <- | Minus |
chr2R | 7194020..7194231 | 363..574 | 99 | <- | Minus |
chr2R | 7194305..7194399 | 268..362 | 100 | <- | Minus |
chr2R | 7194701..7194967 | 1..267 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fpps-RA | 1..1260 | 86..1345 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fpps-RA | 1..1260 | 86..1345 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fpps-RA | 1..1260 | 86..1345 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fpps-RA | 1..1260 | 86..1345 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fpps-RA | 1..1260 | 86..1345 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fpps-RA | 39..1502 | 1..1464 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fpps-RA | 39..1502 | 1..1464 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fpps-RA | 2..1465 | 1..1464 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fpps-RA | 39..1502 | 1..1464 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fpps-RA | 2..1465 | 1..1464 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11305511..11305811 | 1164..1464 | 99 | <- | Minus |
2R | 11305872..11306098 | 937..1163 | 98 | <- | Minus |
2R | 11306159..11306520 | 575..936 | 100 | <- | Minus |
2R | 11306580..11306791 | 363..574 | 99 | <- | Minus |
2R | 11306865..11306959 | 268..362 | 100 | <- | Minus |
2R | 11307261..11307527 | 1..267 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11305511..11305811 | 1164..1464 | 99 | <- | Minus |
2R | 11305872..11306098 | 937..1163 | 98 | <- | Minus |
2R | 11306159..11306520 | 575..936 | 100 | <- | Minus |
2R | 11306580..11306791 | 363..574 | 99 | <- | Minus |
2R | 11306865..11306959 | 268..362 | 100 | <- | Minus |
2R | 11307261..11307527 | 1..267 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11305511..11305811 | 1164..1464 | 99 | <- | Minus |
2R | 11305872..11306098 | 937..1163 | 98 | <- | Minus |
2R | 11306159..11306520 | 575..936 | 100 | <- | Minus |
2R | 11306580..11306791 | 363..574 | 99 | <- | Minus |
2R | 11306865..11306959 | 268..362 | 100 | <- | Minus |
2R | 11307261..11307527 | 1..267 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 7193016..7193316 | 1164..1464 | 99 | <- | Minus |
arm_2R | 7193377..7193603 | 937..1163 | 98 | <- | Minus |
arm_2R | 7193664..7194025 | 575..936 | 100 | <- | Minus |
arm_2R | 7194085..7194296 | 363..574 | 99 | <- | Minus |
arm_2R | 7194370..7194464 | 268..362 | 100 | <- | Minus |
arm_2R | 7194766..7195032 | 1..267 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11308064..11308158 | 268..362 | 100 | <- | Minus |
2R | 11308460..11308726 | 1..267 | 100 | Minus | |
2R | 11306710..11307010 | 1164..1464 | 99 | <- | Minus |
2R | 11307071..11307297 | 937..1163 | 98 | <- | Minus |
2R | 11307358..11307719 | 575..936 | 100 | <- | Minus |
2R | 11307779..11307990 | 363..574 | 99 | <- | Minus |
Translation from 85 to 1344
> GM06581.pep MFKLARMLLPQQRILASPLRLQRLISTSDEVNAEPIIKSMDTIGGLPTEL VNEQKLKKTSRTLSTLQNHSVPIAARVTVSKDESRDFMAVFPDLVRDITT VTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPTQDLTPEN IKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTAIND ALMIENAMYAILKKHFSHLDCYVALMELFHEITYITTCGQSLDQLNSNRC VSEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKDAEAFRQSKTILLE MGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANVEQKQ IMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTSR GVPHQTFLQILNKIYQRDS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12410-PA | 417 | GF12410-PA | 1..417 | 1..419 | 2183 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22668-PA | 419 | GG22668-PA | 1..419 | 1..419 | 2208 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19915-PA | 413 | GH19915-PA | 1..413 | 1..419 | 2029 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fpps-PA | 419 | CG12389-PA | 1..419 | 1..419 | 2173 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19872-PA | 413 | GI19872-PA | 1..413 | 1..419 | 2006 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17346-PA | 419 | GL17346-PA | 1..419 | 1..419 | 2140 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11601-PA | 419 | GA11601-PA | 1..419 | 1..419 | 2140 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20447-PA | 419 | GM20447-PA | 1..419 | 1..419 | 2260 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25915-PA | 383 | GD25915-PA | 1..383 | 1..419 | 2022 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15042-PA | 415 | GJ15042-PA | 1..415 | 1..419 | 2023 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22106-PA | 411 | GK22106-PA | 1..411 | 1..419 | 1908 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13024-PA | 419 | GE13024-PA | 1..419 | 1..419 | 2261 | 99 | Plus |
Translation from 85 to 1344
> GM06581.hyp MFKLARMLLPQQRILASPLRLQRLISTSDEVNAEPIIKSMDTIGGLPTEL VNEQKLKKTSRTLSTLQNHSVPIAARVTVSKDESRDFMAVFPDLVRDITT VTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPTQDLTPEN IKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTAIND ALMIENAMYAILKKHFSHLDCYVALMELFHEITYITTCGQSLDQLNSNRC VSEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKDAEAFRQSKTILLE MGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANVEQKQ IMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTSR GVPHQTFLQILNKIYQRDS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fpps-PA | 419 | CG12389-PA | 1..419 | 1..419 | 2173 | 100 | Plus |