BDGP Sequence Production Resources |
Search the DGRC for GM06606
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 66 |
Well: | 6 |
Vector: | pBS SK- |
Associated Gene/Transcript | Slbp-RA |
Protein status: | GM06606.pep: gold |
Preliminary Size: | 1273 |
Sequenced Size: | 1133 |
Gene | Date | Evidence |
---|---|---|
CG11886 | 2001-01-01 | Release 2 assignment |
CG11886 | 2002-05-17 | Blastp of sequenced clone |
CG11886 | 2003-01-01 | Sim4 clustering to Release 3 |
Slbp | 2008-04-29 | Release 5.5 accounting |
Slbp | 2008-08-15 | Release 5.9 accounting |
Slbp | 2008-12-18 | 5.12 accounting |
1133 bp (1133 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118836
> GM06606.complete TTTGCGCAGAAAACGCAAAACACCGCCGCGACAACATCCTGGAGCAGCGG ACCGCATCATACACAGCACAGTAAACAAACGAAAGATAATTGCACAACAT GCTCTGCGAGGATCAGCACATGTCCGTGGAGAACACACCGCAGAAAGGCT CCGGCAGCCTGAATTCCTCAGCATCCTCCATTTCGATCGATGTGAAGCCC ACCATGCAGAGCTGGGCCCAGGAGGTCCGCGCGGAGTTTGGCCACAGTGA CGAGGCCTCCAGTTCCTTGAATAGCAGCGCTGCCAGCTGCGGTTCCTTGG CCAAAAAGGAGACAGCCGACGGTAATCTGGAGTCCAAAGATGGCGAGGGC CGGGAGATGGCATTTGAGTTCCTGGATGGCGTCAACGAGGTAAAGTTCGA GCGCCTGGTCAAGGAGGAGAAGCTAAAAACGCCCTACAAGCGCCGACACT CGTTCACGCCGCCCAGCAACGAGAACAGTCGCTCCAACAGTCCAAACAGC AGCAACTCCTCGGCCAACGGAGATGCAGCTGCGCCCAAAGGCGGCAACAA TCCCCATTCGAGGAACTCAAAAAAGTCTGGCAACTTCCGCGCCCACAAGG AGGAGAAACGGGTGCGCCACAACAGCTACACGTCCTCCACCTCATCGTCA TCCTCCTACACCGAAGCCGATCCCGCCATCCTAAGTCGCAGGCAGAAGCA AATAGATTACGGAAAGAATACTGCCGCCTACGAGCGCTATGTGGAAATGG TGCCAAAGGACGAGCGGACTCGCGATCATCCGCGCACCCCGAACAAGTAT GGAAAGTACAGCCGCCGCGCCTTCGATGGGCTCGTGAAGATCTGGCGCAA AAGCCTCCACATCTATGATCCACCTACACAAGCGCGCGACACGGCCAAGG ACAGTAATTCCGACTCGGATTCTGACTAGGATCGAATCTTGTTACCGGGC CGGGCTATGTTTTTCAAATATCGGGGGTTTAACTACTAATTTTTATTTCA AGTACAAAGTTAAAACTATGAATCAAACACGCATCTTCGAGTCACAAGGC CGTGTACGGGGAATTGTTACGCAGATGTTTTGTTGAATAAAATGGCGTCT TACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Slbp-RA | 1431 | Slbp-RA | 204..1308 | 1..1105 | 5525 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2811..3033 | 464..702 | 151 | 57.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 24974945..24975793 | 255..1103 | 100 | <- | Minus |
chr3R | 24975855..24976108 | 1..254 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Slbp-RA | 1..831 | 99..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Slbp-RA | 1..831 | 99..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Slbp-RA | 1..831 | 99..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Slbp-RA | 1..831 | 99..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Slbp-RA | 1..831 | 99..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Slbp-RA | 11..1113 | 1..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Slbp-RA | 11..1113 | 1..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Slbp-RA | 30..1132 | 1..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Slbp-RA | 11..1113 | 1..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Slbp-RA | 30..1132 | 1..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29152074..29152922 | 255..1103 | 100 | <- | Minus |
3R | 29152984..29153237 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29152074..29152922 | 255..1103 | 100 | <- | Minus |
3R | 29152984..29153237 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29152074..29152922 | 255..1103 | 100 | <- | Minus |
3R | 29152984..29153237 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 24978706..24978959 | 1..254 | 100 | Minus | |
arm_3R | 24977796..24978644 | 255..1103 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28892905..28893753 | 255..1103 | 100 | <- | Minus |
3R | 28893815..28894068 | 1..254 | 100 | Minus |
Translation from 98 to 928
> GM06606.hyp MLCEDQHMSVENTPQKGSGSLNSSASSISIDVKPTMQSWAQEVRAEFGHS DEASSSLNSSAASCGSLAKKETADGNLESKDGEGREMAFEFLDGVNEVKF ERLVKEEKLKTPYKRRHSFTPPSNENSRSNSPNSSNSSANGDAAAPKGGN NPHSRNSKKSGNFRAHKEEKRVRHNSYTSSTSSSSSYTEADPAILSRRQK QIDYGKNTAAYERYVEMVPKDERTRDHPRTPNKYGKYSRRAFDGLVKIWR KSLHIYDPPTQARDTAKDSNSDSDSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Slbp-PA | 276 | CG11886-PA | 1..276 | 1..276 | 1436 | 100 | Plus |
Translation from 98 to 928
> GM06606.pep MLCEDQHMSVENTPQKGSGSLNSSASSISIDVKPTMQSWAQEVRAEFGHS DEASSSLNSSAASCGSLAKKETADGNLESKDGEGREMAFEFLDGVNEVKF ERLVKEEKLKTPYKRRHSFTPPSNENSRSNSPNSSNSSANGDAAAPKGGN NPHSRNSKKSGNFRAHKEEKRVRHNSYTSSTSSSSSYTEADPAILSRRQK QIDYGKNTAAYERYVEMVPKDERTRDHPRTPNKYGKYSRRAFDGLVKIWR KSLHIYDPPTQARDTAKDSNSDSDSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18411-PA | 272 | GF18411-PA | 1..263 | 1..266 | 821 | 80.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12032-PA | 274 | GG12032-PA | 1..265 | 1..267 | 1037 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23223-PA | 268 | GH23223-PA | 1..268 | 1..276 | 679 | 65.2 | Plus |
Dgri\GH14009-PA | 268 | GH14009-PA | 1..268 | 1..276 | 677 | 65.2 | Plus |
Dgri\GH23225-PA | 268 | GH23225-PA | 1..268 | 1..276 | 630 | 62.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Slbp-PA | 276 | CG11886-PA | 1..276 | 1..276 | 1436 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22353-PA | 252 | GI22353-PA | 1..252 | 1..276 | 717 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23600-PA | 269 | GL23600-PA | 1..257 | 1..263 | 834 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11260-PA | 269 | GA11260-PA | 1..257 | 1..263 | 797 | 77.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12257-PA | 276 | GM12257-PA | 1..267 | 1..267 | 1087 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15074-PA | 257 | GD15074-PA | 1..248 | 1..267 | 993 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14235-PA | 251 | GJ14235-PA | 1..251 | 1..276 | 707 | 71.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22497-PA | 274 | GK22497-PA | 1..257 | 1..260 | 742 | 66.3 | Plus |
Dwil\GK22498-PA | 274 | GK22498-PA | 1..257 | 1..260 | 742 | 66.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10470-PA | 273 | GE10470-PA | 1..263 | 1..266 | 1009 | 90.6 | Plus |