GM06992.complete Sequence
2085 bp (2085 high quality bases) assembled on 2005-10-06
GenBank Submission: BT023903
> GM06992.complete
AAAGATGGCTATCGGCTCCAAGATTATCAAGCCCGGCGGCTCGGATCCCG
ATGACTTCGAGAAGTCCATTGCCCAGGCGTTGGTGGAACTCGAGGCCAAC
AGCGACCTGAAGCCCTACCTGCGCGATCTGCACATCACCCGTGCCCGCGA
GATCGAGTTCGGCAGCAAGAAGGCCGTCATCATCTACGTGCCCATTCCAC
AGCAGAAGGTGTTCCAGAAGATCCAGATCATCCTGGTCCGCGAGCTGGAG
AAGAAGTTCTCGGGCAAGCACGTCGTCGTGATTGCGGAGCGCAAGATCCT
GCCCAAGCCCACGCGCAAGGCCCGCAACCCCCTCAAGCAGAAGCGTCCAC
GCTCCAGGACTCTGACCGCTGTGTACGACGCCATCCTTGAGGATCTGGTC
TTCCCCGCCGAGATTGTGGGCAAGCGCATCCGCGTCAAGCTCGACGGCTC
CCAGCTGGTCAAGGTGCACCTGGACAAGAACCAGCAGACCACCATTGAAC
ACAAAGTAAGCATAAGCATCCTCCACCTCAAAGAAGAGTGCATCGTGTGT
GTTAGCAGGCGCGTACCCTCGATATTTGGGCCTTCCGTGCCATGGAGCTC
AATCTTCGCCAGGGGACGCAGAACAGTCAGGGCCAATTACTCGTTATTGC
AGGCATTAGAAGCCATTGCGGTCCTGCATCTCCAAATATTGGCCACAGTT
GGTCTTTTAATACATCGTTCTTGTGTTTTTCGCTGGCTGTCCTTCCAAAG
CCAGTGATTGTCAAACAGAACGTACATTAATGGCAGCTTATCACTCCACA
ATGTTGAGCCGAGTTTTCACGGCTACTGCATTACTTTCCGGCTCGCCACA
TCATTACACACTCAAATCGATACTTGAAACCATTTAAACAGTAGAATCAG
AAGTCAAATAAGGGGGATAACAGATGGATAGAAAGATTATATGGTTATGT
GTACATAGAACTTTCTATCGTTTTTGTGTTATTTGCTGGAAGTTACATCC
AAAGCCAGTGATTGTCAAACAGAACGTAAATTAATGCGGCTATCACTCCA
CAATGTTGAGCCGGCTTTCCAGGGCTACTGCATTACTTTTCGGCTCGCCA
CATTCCCGTAGAATCTTTTAAATACCTTGGTTTCTACCACCGTTCTTGTG
TTATTCGCTAGATCTTTTCATGGCCTAGCGAGCGTCAAACAGAACGCAAA
CTGAAGCAACGAATCTCCACAATGGTGGGTCTACTTTACCAGGACTGCAT
CATTACTAAAGGATTGCTACAGTTGAATATCCACGAAAATGCTAATTGTG
AACTCCGTTCTTGTGTTATTCGCTAAGCGATTACCTAAGCTCAGCGATTG
TCAAACAGAACGTAGATTAACTGCCGCTAATCACTCCACAATGTTGAGCC
GACTCTCAACGGCTACTGCATTACTATATGCGCCACATTCATGTTAATCA
ACACTTAGCCCTTGAATACTTTGGTTTCCATCACCGTTCTTGTGTTATTT
TCTGGACGTTGTTCAAGTCCAGCGATCGTCAAACAGAACGCAAAGTAATG
CAACGAATCACTCCACAATGGTGGGTCTATTTTGCCAGGACAGCATCATT
ACTTAAGGATTGCAACAGCACCTTACATCTAGAGTTACTAATCTGAAAAC
ACACACGATGCACTTTGAGTGCCGCCTATTTGCCTCTCGAGCGCCGTTTA
GTTTCCTGGTGCCTCGGGACTTCCTATATAAGCGGAAGATTAATCCAGCC
TACCGTACGATATCTTCGCTGCGGTATTTTCTGCCGCAGCGGAGGTTGCG
GTGCTGTACACTGCAAAAAATATGTGAATTCCTGTAATCGTTTCCACTAA
TACGTGCTGTATTTATCTCTCCAGGTCGACACCTTCACCTCGGTCTACAA
GAAGCTGACTGGTCGCGATGTTACCTTCGAATTCCCCGACAACTACCTGA
ATGTCTAGAGCGGCGGGTTCTCGTTCGAGAGTAGCACTGGTTCGCCGGTT
CATCTGGGAATATGAGTTTTTTACATGAGCTAGAGAACGTGAATAAACAT
TAAACAATCTAAAACTAAAAAAAAAAAAAAAAAAA
GM06992.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:43:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS7.d | 2257 | RpS7.d | 47..2116 | 1..2068 | 9890 | 98.5 | Plus |
RpS7.b | 1879 | RpS7.b | 47..1879 | 1..1831 | 8810 | 98.7 | Plus |
RpS7.e | 1500 | RpS7.e | 47..1500 | 1..1452 | 7035 | 99 | Plus |
RpS7.e | 1500 | RpS7.e | 1223..1320 | 1521..1618 | 355 | 90.8 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:50:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 26028981..26030878 | 2066..171 | 9245 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 26030942..26031112 | 173..3 | 855 | 100 | Minus |
chr3R | 27901430 | chr3R | 26029775..26030043 | 1618..1342 | 420 | 80 | Minus |
chr3R | 27901430 | chr3R | 26029429..26029705 | 1272..1006 | 355 | 79.3 | Minus |
chr3R | 27901430 | chr3R | 26029946..26030051 | 851..744 | 340 | 89.8 | Minus |
chr3R | 27901430 | chr3R | 26030198..26030305 | 1103..998 | 325 | 88.9 | Minus |
chr3R | 27901430 | chr3R | 26029622..26029705 | 835..752 | 270 | 88.1 | Minus |
chr3R | 27901430 | chr3R | 26030214..26030297 | 1425..1342 | 255 | 86.9 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 17:18:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
snoRNA:Psi18S-1377a-RA | 139 | CR33750-RA | 1..139 | 715..853 | 680 | 99.2 | Plus |
snoRNA:Psi18S-1377d-RA | 136 | CR34626-RA | 1..136 | 1305..1440 | 680 | 100 | Plus |
snoRNA:Psi18S-1377b-RA | 138 | CR34628-RA | 1..135 | 968..1102 | 675 | 100 | Plus |
snoRNA:Psi18S-1377b-RA | 138 | CR34628-RA | 1..135 | 715..850 | 355 | 87.5 | Plus |
snoRNA:Psi18S-1377a-RA | 139 | CR33750-RA | 1..137 | 968..1103 | 345 | 86.9 | Plus |
snoRNA:Psi18S-1377d-RA | 136 | CR34626-RA | 38..121 | 752..835 | 270 | 88 | Plus |
snoRNA:Psi18S-1377a-RA | 139 | CR33750-RA | 38..121 | 1342..1425 | 255 | 86.9 | Plus |
snoRNA:Psi18S-1377b-RA | 138 | CR34628-RA | 39..120 | 1342..1425 | 235 | 89.2 | Plus |
snoRNA:Psi18S-1377d-RA | 136 | CR34626-RA | 38..121 | 1006..1087 | 235 | 89.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:50:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30206528..30208427 | 2068..171 | 9030 | 98.5 | Minus |
3R | 32079331 | 3R | 30208489..30208659 | 173..3 | 855 | 100 | Minus |
3R | 32079331 | 3R | 30207324..30207477 | 1618..1465 | 410 | 84.4 | Minus |
3R | 32079331 | 3R | 30206978..30207254 | 1272..1006 | 355 | 79.3 | Minus |
3R | 32079331 | 3R | 30207496..30207600 | 850..744 | 335 | 89.7 | Minus |
3R | 32079331 | 3R | 30207747..30207854 | 1103..998 | 325 | 88.9 | Minus |
3R | 32079331 | 3R | 30207171..30207254 | 835..752 | 270 | 88.1 | Minus |
3R | 32079331 | 3R | 30207763..30207846 | 1425..1342 | 255 | 86.9 | Minus |
3R | 32079331 | 3R | 30207511..30207592 | 1425..1342 | 215 | 89.3 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:04:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 29947359..29949258 | 2068..171 | 9040 | 98.4 | Minus |
3R | 31820162 | 3R | 29949320..29949490 | 173..3 | 855 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 03:50:04 has no hits.
GM06992.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:50:45 Download gff for
GM06992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 26028981..26030876 | 173..2066 | 99 | <- | Minus |
chr3R | 26030943..26031112 | 1..172 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:05:02 Download gff for
GM06992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS7-RB | 1..753 | 5..757 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:37:39 Download gff for
GM06992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS7-RB | 1..753 | 5..757 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed on 2013-08-04 07:05:35 has no hits.
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:13:54 Download gff for
GM06992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS7-RB | 1..753 | 5..757 | 99 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 05:16:42 has no hits.
Sim4 to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 17:18:45 Download gff for
GM06992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
snoRNA:Psi18S-1377d-RA | 1..136 | 1305..1440 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:41:35 Download gff for
GM06992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS7-RB | 23..779 | 1..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:37:39 Download gff for
GM06992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS7-RB | 23..779 | 1..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 07:05:35 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:13:54 Download gff for
GM06992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS7-RB | 23..779 | 1..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 05:16:42 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:50:45 Download gff for
GM06992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30206530..30208425 | 173..2066 | 98 | <- | Minus |
3R | 30208490..30208659 | 1..172 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:50:45 Download gff for
GM06992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30206530..30208425 | 173..2066 | 98 | <- | Minus |
3R | 30208490..30208659 | 1..172 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:50:45 Download gff for
GM06992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30206530..30208425 | 173..2066 | 98 | <- | Minus |
3R | 30208490..30208659 | 1..172 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:05:35 Download gff for
GM06992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26032252..26034147 | 173..2066 | 98 | <- | Minus |
arm_3R | 26034212..26034381 | 1..172 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:50:17 Download gff for
GM06992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29947361..29949256 | 173..2066 | 98 | <- | Minus |
3R | 29949321..29949490 | 1..172 | 98 | | Minus |
GM06992.pep Sequence
Translation from 4 to 756
> GM06992.pep
MAIGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREI
EFGSKKAVIIYVPIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILP
KPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQ
LVKVHLDKNQQTTIEHKVSISILHLKEECIVCVSRRVPSIFGPSVPWSSI
FARGRRTVRANYSLLQALEAIAVLHLQILATVGLLIHRSCVFRWLSFQSQ
*
GM06992.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:39:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF16191-PA | 194 | GF16191-PA | 1..169 | 1..169 | 852 | 97.6 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:39:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG11951-PA | 194 | GG11951-PA | 1..169 | 1..169 | 862 | 99.4 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:39:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH18420-PA | 194 | GH18420-PA | 1..169 | 1..169 | 852 | 97.6 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS7-PE | 194 | CG1883-PE | 1..168 | 1..168 | 835 | 100 | Plus |
RpS7-PC | 194 | CG1883-PC | 1..168 | 1..168 | 835 | 100 | Plus |
RpS7-PA | 194 | CG1883-PA | 1..168 | 1..168 | 835 | 100 | Plus |
RpS7-PD | 194 | CG1883-PD | 1..168 | 1..168 | 835 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:39:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI24321-PA | 194 | GI24321-PA | 1..169 | 1..169 | 853 | 97.6 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:39:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL14128-PA | 194 | GL14128-PA | 1..169 | 1..169 | 855 | 98.2 | Plus |
Dper\GL14058-PA | 194 | GL14058-PA | 1..169 | 1..169 | 855 | 98.2 | Plus |
Dper\GL11058-PA | 194 | GL11058-PA | 1..169 | 1..169 | 847 | 97.6 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:39:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA15097-PA | 194 | GA15097-PA | 1..169 | 1..169 | 855 | 98.2 | Plus |
Dpse\GA15097-PB | 194 | GA15097-PB | 1..169 | 1..169 | 855 | 98.2 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:39:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM12166-PA | 194 | GM12166-PA | 1..169 | 1..169 | 862 | 99.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:39:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD17201-PA | 194 | GD17201-PA | 1..169 | 1..169 | 862 | 99.4 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:39:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ10407-PA | 202 | GJ10407-PA | 15..177 | 7..169 | 783 | 93.9 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:39:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK13140-PA | 194 | GK13140-PA | 1..169 | 1..169 | 851 | 97.6 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:39:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE23400-PA | 194 | GE23400-PA | 1..169 | 1..169 | 857 | 98.8 | Plus |
GM06992.hyp Sequence
Translation from 4 to 756
> GM06992.hyp
MAIGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREI
EFGSKKAVIIYVPIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILP
KPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQ
LVKVHLDKNQQTTIEHKVSISILHLKEECIVCVSRRVPSIFGPSVPWSSI
FARGRRTVRANYSLLQALEAIAVLHLQILATVGLLIHRSCVFRWLSFQSQ
*
GM06992.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 09:55:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS7-PE | 194 | CG1883-PE | 1..168 | 1..168 | 835 | 100 | Plus |
RpS7-PC | 194 | CG1883-PC | 1..168 | 1..168 | 835 | 100 | Plus |
RpS7-PA | 194 | CG1883-PA | 1..168 | 1..168 | 835 | 100 | Plus |
RpS7-PD | 194 | CG1883-PD | 1..168 | 1..168 | 835 | 100 | Plus |