BDGP Sequence Production Resources |
Search the DGRC for GM08044
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 80 |
Well: | 44 |
Vector: | pBS SK- |
Associated Gene/Transcript | Fdh-RA |
Protein status: | GM08044.pep: gold |
Preliminary Size: | 1548 |
Sequenced Size: | 1371 |
Gene | Date | Evidence |
---|---|---|
CG6598 | 2001-01-01 | Release 2 assignment |
CG6598 | 2001-10-10 | Blastp of sequenced clone |
CG6598 | 2003-01-01 | Sim4 clustering to Release 3 |
Fdh | 2008-04-29 | Release 5.5 accounting |
Fdh | 2008-08-15 | Release 5.9 accounting |
Fdh | 2008-12-18 | 5.12 accounting |
1371 bp (1371 high quality bases) assembled on 2001-10-10
GenBank Submission: AY089518
> GM08044.complete CTTCCTTATCATCATTCATTTTCCAGTCGTTCTCCATTCGCCAATTGGAC CTTGTCGCTAAACTTTCCAATAAACCATACTGCAAAGATGTCTGCTACCG AGGGCAAGGTTATCACATGCAAGGCCGCCGTCGCTTGGGAGGCAAAGAAG CCGCTGGTCATCGAGGATATCGAGGTGGCGCCGCCCAAGGCTCATGAGGT GCGCATCAAGATCACGGCCACGGGCGTCTGCCACACGGATGCCTTCACCC TGAGCGGTGCCGATCCGGAGGGCCTGTTCCCAGTGGTGTTGGGACATGAG GGCGCCGGCATCGTGGAGAGCGTCGGCGAGGGCGTGACCAACTTCAAGGC TGGCGACCATGTCATCGCTCTCTACATCCCCCAGTGCAACGAGTGCAAGT TCTGCAAGAGCGGCAAGACGAATCTCTGCCAAAAGATCCGACTTACCCAG GGCGCTGGAGTCATGCCCGAGGGCACCTCCCGTCTCAGCTGCAAGGGACA GCAGTTGTTCCACTTCATGGGCACCTCCACCTTCGCAGAGTACACCGTGG TGGCCGACATTTCGCTGACAAAGATCAACGAAAAGGCGCCGCTGGAGAAA GTCTGCCTGCTGGGGTGCGGCATTTCCACAGGCTACGGAGCCGCCCTCAA CACTGCCAAGGTGGAAGCCGGTAGCACCTGCGCTGTTTGGGGCTTGGGAG CTGTGGGCTTGGCCGTGGGTTTGGGCTGCAAGAAGGCTGGTGCCGGCAAG ATCTACGGCATTGACATCAATCCCGACAAGTTTGAGCTGGCCAAGAAGTT TGGATTCACCGACTTTGTCAACCCCAAGGATGTGGCCGACAAGGGTTCGA TCCAGAACTACCTGATCGATCTGACCGATGGTGGATTCGATTACACCTTC GAATGCATTGGCAATGTGAACACCATGCGCTCCGCTTTGGAGGCCACACA CAAGGGTTGGGGCACTTCGGTGGTGATCGGAGTGGCCGGTGCTGGACAGG AGATTTCCACGCGACCCTTCCAGCTGGTCGTGGGTCGCGTGTGGAAGGGT TCCGCCTTCGGAGGCTGGCGCTCCGTTTCCGATGTTCCCAAATTGGTGGA GGACTACCTGAAGAAGGATCTGCTGGTGGACGAGTTCATCACCCACGAGC TGCCGCTGTCGCAGATCAACGAGGCATTCGATCTGATGCACAAGGGCGAG AGTATCCGATCCATTATTAAGTACTAAGCATGAGATAACAATTCTTTGCT TTTCACTTTTTATACAAGTTGGCAATCGCATGCGATTGCTTAAAATAATA AACTCCCAGTGTATATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fdh-RA | 1590 | Fdh-RA | 190..1508 | 1..1319 | 6565 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 6696443..6697564 | 1318..197 | 5595 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 6697790..6697899 | 110..1 | 550 | 100 | Minus |
chr3R | 27901430 | chr3R | 6697631..6697724 | 200..107 | 455 | 98.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 10870905..10872027 | 1319..197 | 5600 | 99.9 | Minus |
3R | 32079331 | 3R | 10872253..10872362 | 110..1 | 550 | 100 | Minus |
3R | 32079331 | 3R | 10872094..10872187 | 200..107 | 455 | 98.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 10611736..10612858 | 1319..197 | 5600 | 99.9 | Minus |
3R | 31820162 | 3R | 10613084..10613193 | 110..1 | 550 | 100 | Minus |
3R | 31820162 | 3R | 10612925..10613018 | 200..107 | 455 | 98.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
aurora-element | 4263 | aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). | 3015..3055 | 375..414 | 121 | 80.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 6696443..6697562 | 199..1318 | 99 | <- | Minus |
chr3R | 6697633..6697722 | 109..198 | 98 | <- | Minus |
chr3R | 6697792..6697899 | 1..108 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fdh-RA | 1..1140 | 88..1227 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fdh-RA | 1..1140 | 88..1227 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fdh-RA | 1..1140 | 88..1227 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fdh-RA | 1..1140 | 88..1227 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fdh-RA | 1..1140 | 88..1227 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fdh-RA | 19..1336 | 1..1318 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fdh-RA | 19..1336 | 1..1318 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fdh-RA | 20..1337 | 1..1318 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fdh-RA | 19..1336 | 1..1318 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fdh-RA | 20..1337 | 1..1318 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10872255..10872362 | 1..108 | 100 | Minus | |
3R | 10870906..10872025 | 199..1318 | 99 | <- | Minus |
3R | 10872096..10872185 | 109..198 | 98 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10872255..10872362 | 1..108 | 100 | Minus | |
3R | 10870906..10872025 | 199..1318 | 99 | <- | Minus |
3R | 10872096..10872185 | 109..198 | 98 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10872255..10872362 | 1..108 | 100 | Minus | |
3R | 10870906..10872025 | 199..1318 | 99 | <- | Minus |
3R | 10872096..10872185 | 109..198 | 98 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 6696628..6697747 | 199..1318 | 99 | <- | Minus |
arm_3R | 6697818..6697907 | 109..198 | 98 | <- | Minus |
arm_3R | 6697977..6698084 | 1..108 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10613086..10613193 | 1..108 | 100 | Minus | |
3R | 10611737..10612856 | 199..1318 | 99 | <- | Minus |
3R | 10612927..10613016 | 109..198 | 98 | <- | Minus |
Translation from 0 to 1226
> GM08044.hyp LPYHHSFSSRSPFANWTLSLNFPINHTAKMSATEGKVITCKAAVAWEAKK PLVIEDIEVAPPKAHEVRIKITATGVCHTDAFTLSGADPEGLFPVVLGHE GAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQ GAGVMPEGTSRLSCKGQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEK VCLLGCGISTGYGAALNTAKVEAGSTCAVWGLGAVGLAVGLGCKKAGAGK IYGIDINPDKFELAKKFGFTDFVNPKDVADKGSIQNYLIDLTDGGFDYTF ECIGNVNTMRSALEATHKGWGTSVVIGVAGAGQEISTRPFQLVVGRVWKG SAFGGWRSVSDVPKLVEDYLKKDLLVDEFITHELPLSQINEAFDLMHKGE SIRSIIKY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fdh-PA | 379 | CG6598-PA | 1..379 | 30..408 | 1988 | 100 | Plus |
Translation from 87 to 1226
> GM08044.pep MSATEGKVITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHT DAFTLSGADPEGLFPVVLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQC NECKFCKSGKTNLCQKIRLTQGAGVMPEGTSRLSCKGQQLFHFMGTSTFA EYTVVADISLTKINEKAPLEKVCLLGCGISTGYGAALNTAKVEAGSTCAV WGLGAVGLAVGLGCKKAGAGKIYGIDINPDKFELAKKFGFTDFVNPKDVA DKGSIQNYLIDLTDGGFDYTFECIGNVNTMRSALEATHKGWGTSVVIGVA GAGQEISTRPFQLVVGRVWKGSAFGGWRSVSDVPKLVEDYLKKDLLVDEF ITHELPLSQINEAFDLMHKGESIRSIIKY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16175-PA | 379 | GF16175-PA | 1..379 | 1..379 | 1956 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17256-PA | 379 | GG17256-PA | 1..379 | 1..379 | 1983 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18738-PA | 379 | GH18738-PA | 1..379 | 1..379 | 1902 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fdh-PA | 379 | CG6598-PA | 1..379 | 1..379 | 1988 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24655-PA | 379 | GI24655-PA | 1..379 | 1..379 | 1876 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12061-PA | 379 | GL12061-PA | 1..379 | 1..379 | 1938 | 96 | Plus |
Dper\GL21779-PA | 360 | GL21779-PA | 30..261 | 37..287 | 161 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19711-PA | 379 | GA19711-PA | 1..379 | 1..379 | 1937 | 95.8 | Plus |
Dpse\GA26401-PA | 360 | GA26401-PA | 30..338 | 37..370 | 164 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26140-PA | 379 | GM26140-PA | 1..379 | 1..379 | 1988 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20694-PA | 379 | GD20694-PA | 1..379 | 1..379 | 1993 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24029-PA | 379 | GJ24029-PA | 1..379 | 1..379 | 1899 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13286-PA | 380 | GK13286-PA | 1..380 | 1..379 | 1922 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24658-PA | 379 | GE24658-PA | 1..379 | 1..379 | 1982 | 99.2 | Plus |