BDGP Sequence Production Resources |
Search the DGRC for GM08271
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 82 |
Well: | 71 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG5919-RA |
Protein status: | GM08271.pep: gold |
Preliminary Size: | 1111 |
Sequenced Size: | 927 |
Gene | Date | Evidence |
---|---|---|
CG5919 | 2001-01-01 | Release 2 assignment |
CG5919 | 2002-05-17 | Blastp of sequenced clone |
CG5919 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5919 | 2008-04-29 | Release 5.5 accounting |
CG5919 | 2008-08-15 | Release 5.9 accounting |
CG5919 | 2008-12-18 | 5.12 accounting |
927 bp (927 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118469
> GM08271.complete GCAGACCCGCGCGCTGTATTACGAAGTTTCACTTTCATATTTGTTTTGGC CACCACTCCAAACTAGTCATTTACCAAAAATGTTGGCCTCTCGCTTGAAT CTCCTGTTGCCCCGCGTATCCTGGCTGCGCGGTTGCTCAACGACAGCGGT GGGCCAGAAACATCAGCGCCAGGTGCCCACGGAGTTCGCCGTACACGATC CTCTGCAGGCTCACGCTCTAAAGGAACAGTGCATCCTGGTTGACGCCAAC GACCAAGCCATTGGGGCCGCCTCTAAGGCAGACTGCCACCGTGTGCATCC AGAGACGAATGATGTTAAGCTCCATCGCGCCTTCAGTGTTTTTCTCTTCA ATTCTCAGGGAGAGATGCTAGTGCAGAAGCGATCGTCTCACAAGATAACC TTCCCAAACACCTACACCAACGCGTGCTGCAGCCATCCGCTTTACGAAAT CGAACAGGAACGTCAGGAGCGCAACGCACAGGGCATCCGTGTGGCCGCTC AACGACGTCTCAACTACGAACTGGGCATTCCCACAGAGGAACTGCAGCCA CAGGACTTTCGCTACCTGACCCGCATCCACTACGCAGACACGGGCGACGG CGTGTGGGGCGAGCACGAGATAGACTACATCCTGTTCCTGCAAAAAGACG TGACGCTGCGTCCAAATAGCAACGAGGTCAGTGAGGTGCGCTACTTGCGC CGCGATAAGATCGACGAGGCGGTGGCGAAGTTTAGTGCCCCGCTGACACC CTGGTTCTCTCTGATTCTGCAGCATCGATTGAAACTCTGGTGGGACAATT TGCACCAGCTGGAGCAATTTGAGGACTTGAGTAATATTCAGCGCTTTTAA GTGTGCTAACCAACCAAAAATACACGTAATGACGTCTAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5919-RB | 1332 | CG5919-RB | 55..945 | 1..891 | 4455 | 100 | Plus |
CG5919-RA | 1332 | CG5919-RA | 55..945 | 1..891 | 4455 | 100 | Plus |
CG5919.a | 1236 | CG5919.a | 55..730 | 1..676 | 3380 | 100 | Plus |
CG5919.a | 1236 | CG5919.a | 729..849 | 771..891 | 605 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 17093966..17094359 | 1..394 | 100 | -> | Plus |
chr3R | 17094416..17094908 | 395..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5919-RA | 1..771 | 80..850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5919-RB | 1..771 | 80..850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5919-RA | 1..771 | 80..850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5919-RA | 1..771 | 80..850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5919-RA | 1..771 | 80..850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5919-RA | 1..887 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5919-RA | 1..887 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5919-RA | 12..898 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5919-RA | 1..887 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5919-RA | 12..898 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21270137..21270530 | 1..394 | 100 | -> | Plus |
3R | 21270587..21271079 | 395..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21270137..21270530 | 1..394 | 100 | -> | Plus |
3R | 21270587..21271079 | 395..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21270137..21270530 | 1..394 | 100 | -> | Plus |
3R | 21270587..21271079 | 395..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 17095859..17096252 | 1..394 | 100 | -> | Plus |
arm_3R | 17096309..17096801 | 395..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21010968..21011361 | 1..394 | 100 | -> | Plus |
3R | 21011418..21011910 | 395..887 | 100 | Plus |
Translation from 0 to 849
> GM08271.hyp QTRALYYEVSLSYLFWPPLQTSHLPKMLASRLNLLLPRVSWLRGCSTTAV GQKHQRQVPTEFAVHDPLQAHALKEQCILVDANDQAIGAASKADCHRVHP ETNDVKLHRAFSVFLFNSQGEMLVQKRSSHKITFPNTYTNACCSHPLYEI EQERQERNAQGIRVAAQRRLNYELGIPTEELQPQDFRYLTRIHYADTGDG VWGEHEIDYILFLQKDVTLRPNSNEVSEVRYLRRDKIDEAVAKFSAPLTP WFSLILQHRLKLWWDNLHQLEQFEDLSNIQRF*
Translation from 79 to 849
> GM08271.pep MLASRLNLLLPRVSWLRGCSTTAVGQKHQRQVPTEFAVHDPLQAHALKEQ CILVDANDQAIGAASKADCHRVHPETNDVKLHRAFSVFLFNSQGEMLVQK RSSHKITFPNTYTNACCSHPLYEIEQERQERNAQGIRVAAQRRLNYELGI PTEELQPQDFRYLTRIHYADTGDGVWGEHEIDYILFLQKDVTLRPNSNEV SEVRYLRRDKIDEAVAKFSAPLTPWFSLILQHRLKLWWDNLHQLEQFEDL SNIQRF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17702-PA | 258 | GF17702-PA | 1..258 | 1..256 | 1161 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24520-PA | 256 | GG24520-PA | 1..256 | 1..256 | 1345 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21955-PA | 253 | GH21955-PA | 1..253 | 1..256 | 1106 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Idi-PB | 256 | CG5919-PB | 1..256 | 1..256 | 1359 | 100 | Plus |
Idi-PA | 256 | CG5919-PA | 1..256 | 1..256 | 1359 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21943-PA | 251 | GI21943-PA | 1..251 | 1..256 | 1067 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27329-PA | 252 | GL27329-PA | 1..252 | 1..256 | 1097 | 80.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19228-PA | 252 | GA19228-PA | 1..252 | 1..256 | 1097 | 80.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15083-PA | 256 | GM15083-PA | 1..256 | 1..256 | 1349 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19412-PA | 256 | GD19412-PA | 1..256 | 1..256 | 1348 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14302-PA | 251 | GJ14302-PA | 1..251 | 1..256 | 1095 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14497-PA | 252 | GK14497-PA | 1..252 | 1..256 | 1065 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25722-PA | 256 | GE25722-PA | 1..256 | 1..256 | 1317 | 94.9 | Plus |