BDGP Sequence Production Resources |
Search the DGRC for GM09012
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 90 |
Well: | 12 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG1764-RA |
Protein status: | GM09012.pep: gold |
Preliminary Size: | 1558 |
Sequenced Size: | 1377 |
Gene | Date | Evidence |
---|---|---|
CG1764 | 2001-01-01 | Release 2 assignment |
CG1764 | 2001-10-10 | Blastp of sequenced clone |
CG1764 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1764 | 2008-04-29 | Release 5.5 accounting |
CG1764 | 2008-08-15 | Release 5.9 accounting |
CG1764 | 2008-12-18 | 5.12 accounting |
1377 bp (1377 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060959
> GM09012.complete CTTCGCATCCGCATCTGCATCTGCATTCCGCCGCCGAGGACGAGCACCCA GTGGCCAATCCGCCGACCATGTCGCCCAAGTACACACATGCGATTGTGGC CAGAATCTCGGATGCCCTGCTGGAGAACGGAAAGTTCGACGTACAGCTGG CCAAGCAGCAGCACGAGCAGTACTGCACCCTCCTGAGGACCATTGGTCTC GATGTGATCGAGCTGCCGCCGGATGACCAGCTGCCCGAGGGCGTATTTGT CGAGAACAGTGCGGTGATCTGTAACGGAGTGGCCCTGATCGGAAGATCGG AGCATCCCAAGCGGCAACTCGAGGCCGAGAGCATGGCCATTATTCTCAAA AAGGAGCTGGACATTCCGGTCATCGAGATCGAGGATCCGAACGCTCAGCT CGATGGTGGCGATGTGCTTTTCACGGGTCGCGAATTCTTCGTTGGCATCT CCAGTTTCACCAATGAGGAGGGAGCCCGGGCGGTGGCCATGGCCTATCCC GAATATCCAGTGACGCCGATTCGGGTCAACGGCACCAAGAGGCTGAAGTA CTATGTGACCATGGCGGGGCCGGAAGTGCTGTGTGTGAGCAGTAGCCCCA CCTGCCAGGAGATCGTCAAGCGGATGGAGCGCGAGGCCATCTGCACCTAC CAGAAGTTGACTCTGCCCGAGGAGAGTGCGGCCAATATGCTGTACATCAA TGGAACGATCGTGCACAGATCCCCAACGGAAATTCCAGAAGCCTACAAGA CTTTAAAAGAGAAAATCGACATTCCAACACGCAACATAAATATAAGTGAA TTTAGCCAATATTCCAGTGGTCTGACCTCGTCGTGTTTGTTGCTGCGACG CTGGAAGTCCATACGGAGCTTGTGAATCTCTCTGGGAGCCGAGAGGTTCA ACCGACCGGAGTGAGAAGCATTGCCATGAGAAACATGCACAACAGGCCCA AGGAGCAGGATACTGCATGCATTCCCTGCTCTGTCCAGGCATCAGCAAAA TTGTATTATCTTATTATAGTTTATACACACCATCTCTTGTTATTGTTACA CAATTAAGATTAAACCTTTGACGCTAATCAAACTGATTGTCGCTGAGGCG TCGCTGCTGTTACTTTCCAGCTCATTGTTATTTTATAGGTTGTGTAATTC AATCAGAGTTGGAAAGTATCATCGCCGTCGACGTCCAGATAGATGATCGC CATTCCTCCTCCACTCACAATCCATGACGATGTTGAACGGATATCATTGT ATTAATATGGTAAAATTACTATTATGAATTGTATCTACTTTACAAGTAGT TTGTTGAATGTGTTCACTGTCTGTCCTCGAAATAAATGCAACATTTGTAA TCTCTTCTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 13185302..13185913 | 1359..748 | 3060 | 100 | Minus |
chrX | 22417052 | chrX | 13186502..13186828 | 428..102 | 1635 | 100 | Minus |
chrX | 22417052 | chrX | 13185973..13186198 | 749..524 | 1130 | 100 | Minus |
chrX | 22417052 | chrX | 13187328..13187430 | 103..1 | 515 | 100 | Minus |
chrX | 22417052 | chrX | 13186340..13186440 | 526..426 | 505 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 13294477..13295098 | 1369..748 | 3095 | 99.8 | Minus |
X | 23542271 | X | 13295687..13296013 | 428..102 | 1635 | 100 | Minus |
X | 23542271 | X | 13295158..13295383 | 749..524 | 1130 | 100 | Minus |
X | 23542271 | X | 13296513..13296615 | 103..1 | 515 | 100 | Minus |
X | 23542271 | X | 13295525..13295625 | 526..426 | 505 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 13302575..13303196 | 1369..748 | 3095 | 99.8 | Minus |
X | 23527363 | X | 13303785..13304111 | 428..102 | 1635 | 100 | Minus |
X | 23527363 | X | 13303256..13303481 | 749..524 | 1130 | 100 | Minus |
X | 23527363 | X | 13304611..13304713 | 103..1 | 515 | 100 | Minus |
X | 23527363 | X | 13303623..13303723 | 526..426 | 505 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13185302..13185911 | 750..1359 | 100 | <- | Minus |
chrX | 13185973..13186197 | 525..749 | 100 | <- | Minus |
chrX | 13186342..13186439 | 427..524 | 100 | <- | Minus |
chrX | 13186504..13186826 | 104..426 | 100 | <- | Minus |
chrX | 13187328..13187430 | 1..103 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1764-RA | 1..807 | 69..875 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1764-RA | 1..807 | 69..875 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1764-RB | 1..807 | 69..875 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1764-RA | 1..807 | 69..875 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1764-RB | 1..807 | 69..875 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1764-RA | 37..1395 | 1..1359 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1764-RA | 37..1395 | 1..1359 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1764-RB | 408..1766 | 1..1359 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1764-RA | 37..1395 | 1..1359 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1764-RB | 408..1766 | 1..1359 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13294487..13295096 | 750..1359 | 99 | <- | Minus |
X | 13295158..13295382 | 525..749 | 100 | <- | Minus |
X | 13295527..13295624 | 427..524 | 100 | <- | Minus |
X | 13295689..13296011 | 104..426 | 100 | <- | Minus |
X | 13296513..13296615 | 1..103 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13294487..13295096 | 750..1359 | 99 | <- | Minus |
X | 13295158..13295382 | 525..749 | 100 | <- | Minus |
X | 13295527..13295624 | 427..524 | 100 | <- | Minus |
X | 13295689..13296011 | 104..426 | 100 | <- | Minus |
X | 13296513..13296615 | 1..103 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13294487..13295096 | 750..1359 | 99 | <- | Minus |
X | 13295158..13295382 | 525..749 | 100 | <- | Minus |
X | 13295527..13295624 | 427..524 | 100 | <- | Minus |
X | 13295689..13296011 | 104..426 | 100 | <- | Minus |
X | 13296513..13296615 | 1..103 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13189191..13189415 | 525..749 | 100 | <- | Minus |
arm_X | 13189560..13189657 | 427..524 | 100 | <- | Minus |
arm_X | 13189722..13190044 | 104..426 | 100 | <- | Minus |
arm_X | 13190546..13190648 | 1..103 | 100 | Minus | |
arm_X | 13188520..13189129 | 750..1359 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13302585..13303194 | 750..1359 | 99 | <- | Minus |
X | 13303256..13303480 | 525..749 | 100 | <- | Minus |
X | 13303625..13303722 | 427..524 | 100 | <- | Minus |
X | 13303787..13304109 | 104..426 | 100 | <- | Minus |
X | 13304611..13304713 | 1..103 | 100 | Minus |
Translation from 2 to 874
> GM09012.hyp SHPHLHLHSAAEDEHPVANPPTMSPKYTHAIVARISDALLENGKFDVQLA KQQHEQYCTLLRTIGLDVIELPPDDQLPEGVFVENSAVICNGVALIGRSE HPKRQLEAESMAIILKKELDIPVIEIEDPNAQLDGGDVLFTGREFFVGIS SFTNEEGARAVAMAYPEYPVTPIRVNGTKRLKYYVTMAGPEVLCVSSSPT CQEIVKRMEREAICTYQKLTLPEESAANMLYINGTIVHRSPTEIPEAYKT LKEKIDIPTRNINISEFSQYSSGLTSSCLLLRRWKSIRSL*
Translation from 68 to 874
> GM09012.pep MSPKYTHAIVARISDALLENGKFDVQLAKQQHEQYCTLLRTIGLDVIELP PDDQLPEGVFVENSAVICNGVALIGRSEHPKRQLEAESMAIILKKELDIP VIEIEDPNAQLDGGDVLFTGREFFVGISSFTNEEGARAVAMAYPEYPVTP IRVNGTKRLKYYVTMAGPEVLCVSSSPTCQEIVKRMEREAICTYQKLTLP EESAANMLYINGTIVHRSPTEIPEAYKTLKEKIDIPTRNINISEFSQYSS GLTSSCLLLRRWKSIRSL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21405-PA | 268 | GF21405-PA | 1..268 | 1..268 | 1320 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19510-PA | 268 | GG19510-PA | 1..268 | 1..268 | 1372 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24350-PA | 268 | GH24350-PA | 1..268 | 1..268 | 1281 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1764-PA | 268 | CG1764-PA | 1..268 | 1..268 | 1371 | 100 | Plus |
CG1764-PB | 268 | CG1764-PB | 1..268 | 1..268 | 1371 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11004-PA | 268 | GI11004-PA | 1..268 | 1..268 | 1311 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18337-PA | 228 | GL18337-PA | 1..228 | 1..268 | 1012 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14591-PA | 268 | GA14591-PA | 1..268 | 1..268 | 1259 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11497-PA | 268 | GM11497-PA | 1..268 | 1..268 | 1405 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15603-PA | 268 | GJ15603-PA | 1..268 | 1..268 | 1299 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10109-PA | 268 | GK10109-PA | 1..268 | 1..268 | 1306 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16164-PA | 268 | GE16164-PA | 1..268 | 1..268 | 1373 | 96.3 | Plus |