BDGP Sequence Production Resources |
Search the DGRC for GM10285
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 102 |
Well: | 85 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG17270-RA |
Protein status: | GM10285.pep: gold |
Preliminary Size: | 1494 |
Sequenced Size: | 1400 |
Gene | Date | Evidence |
---|---|---|
CG17270 | 2001-01-01 | Release 2 assignment |
CG17270 | 2001-11-09 | Blastp of sequenced clone |
CG17270 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17270 | 2008-04-29 | Release 5.5 accounting |
CG17270 | 2008-08-15 | Release 5.9 accounting |
CG17270 | 2008-12-18 | 5.12 accounting |
1400 bp (1400 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069274
> GM10285.complete AAGGCGTTGCAGGCGGCGGTACGAGAATCGGTCGCGTTTACAGCTGAACG GCGAAAATATACATATATGAAATAAACAATCGCTGCTGCATAAAATAGGT TTTTGAGGGACTCAAGAGTGCCCCAGTGGCAGTGCTGCAAACAAATATTA CGCATACGCCGGGTGGGACGGATCGCGGTACTGCTGATTAACACGGGAAT CTTTGCAAAATGGCTGCCATGCAGTCTGGCGGACGACCCCGCGAGCGATT GCTGTACGCCTTCCGGGGATGGATAGCATTCGTGGCCTTTATGGACCTGG GCACGGCCTTTAGGAGCTACATAGAAAGACGCAGCTTCCTGGGCGATCAC AGCGACACCCAGTTCATAGAGGGGGACTACACCATATCGCGGATCATCGG GATGTACTGCCTGCTGAAGGCCATCGCTCTCGTCCACTGCACCCTCTACA TTCACTACAAGCCGGTGGTCAGCATGGGCGGCTGCTCATTGGCCCTCACC ATGGTCTTCTATGCCACCGAGGCACTCTACTTTCGCTCAAGCACCATTAA CTTCTACGTGATCTTCCCGTGTGTGCTAAATTCTATAACTCTACTGGGCC TCATCTACATACCCAAACGACTGCGGCTCTGGGAGCCAAATATGGATCTG GATGACGAAAACTCACAGCTGCTCAAGCAAATGACGGGCTTCAAGAGACG ACGAGCGAAAAAACAATAGTTTATTACTATCTAGAAATATGAAAAGCAAT AACCGGAAGACACTGAGTTGAGTTTCCGGTAGCACAGTATTGTGAAAGAA TCGCAAATTTCGCTTTGGACTGCATTGGTGTGATAGAATCGGCATCATGT TCATCATTATATATACTCAATAGCAATACTAAAAACAACGCCAAATTAGT GATTTTCTATGAACTAGGTAGTGAAGGGTCTAAATGGCCCCGGAATAAGT CAATTTCTGGCATAATCACTTCAAGACATACATATGTTGTACTTCCTTTT TTTATAAAGCGTATTTATATACATTTAAAAATGTATGGCACAATAGAGTT TTTGCACTTTTAAGAGTTGAAAATCGATACTAGGAAATATTTATCTAATT ATCAGAGACATCTAGCACCCGAGTTAAATAATTAAAATCGAAAGGCTTTA AATTAACAAATAAGCTCATAATCATCATATTTACATATACGATTATCAAT TTATGGATCATGCTTCCATATCGATCATAAAATTAAGGAACATTTTATAG TCATTACGTATGATTGAATGTTATGTAAACCTAAAAAAAAAAAAAATACA ATAATAGTTTTGTACGAATTATGTAGATTATGTTTCAATAAAAATTTGAA TTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17270-RA | 1481 | CG17270-RA | 128..1481 | 1..1359 | 6480 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 16640360..16641129 | 1355..583 | 3660 | 98.8 | Minus |
chr3R | 27901430 | chr3R | 16642623..16642832 | 212..1 | 965 | 98.1 | Minus |
chr3R | 27901430 | chr3R | 16641554..16641715 | 373..212 | 795 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 16641224..16641342 | 582..464 | 580 | 99.2 | Minus |
chr3R | 27901430 | chr3R | 16641409..16641501 | 464..372 | 465 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 20816441..20817214 | 1359..583 | 3665 | 98.7 | Minus |
3R | 32079331 | 3R | 20818708..20818917 | 212..1 | 965 | 98.1 | Minus |
3R | 32079331 | 3R | 20817639..20817800 | 373..212 | 795 | 99.4 | Minus |
3R | 32079331 | 3R | 20817309..20817427 | 582..464 | 580 | 99.2 | Minus |
3R | 32079331 | 3R | 20817494..20817586 | 464..372 | 465 | 100 | Minus |
2R | 25286936 | 2R | 2169228..2169282 | 1339..1393 | 215 | 92.7 | Plus |
U | 3151297 | U | 63357..63409 | 1391..1339 | 190 | 90.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 20557272..20558045 | 1359..583 | 3685 | 98.7 | Minus |
3R | 31820162 | 3R | 20559539..20559748 | 212..1 | 975 | 98.1 | Minus |
3R | 31820162 | 3R | 20558470..20558631 | 373..212 | 795 | 99.3 | Minus |
3R | 31820162 | 3R | 20558140..20558258 | 582..464 | 580 | 99.1 | Minus |
3R | 31820162 | 3R | 20558325..20558417 | 464..372 | 465 | 100 | Minus |
2R | 25260384 | 2R | 2169228..2169282 | 1339..1393 | 215 | 92.7 | Plus |
Unmapped_scaffold_04 | 86267 | Unmapped_scaffold_04 | 63357..63409 | 1391..1339 | 190 | 90.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 16640360..16641129 | 583..1355 | 98 | <- | Minus |
chr3R | 16641224..16641342 | 464..582 | 99 | <- | Minus |
chr3R | 16641410..16641500 | 373..463 | 100 | <- | Minus |
chr3R | 16641555..16641715 | 212..372 | 99 | <- | Minus |
chr3R | 16642624..16642832 | 1..211 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17270-RA | 1..510 | 210..719 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17270-RA | 1..510 | 210..719 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17270-RA | 1..510 | 210..719 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17270-RA | 1..510 | 210..719 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17270-RA | 1..510 | 210..719 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17270-RA | 8..1357 | 1..1355 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17270-RA | 8..1357 | 1..1355 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17270-RA | 13..1362 | 1..1355 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17270-RA | 8..1357 | 1..1355 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17270-RA | 13..1362 | 1..1355 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20816445..20817214 | 583..1355 | 98 | <- | Minus |
3R | 20817309..20817427 | 464..582 | 99 | <- | Minus |
3R | 20817495..20817585 | 373..463 | 100 | <- | Minus |
3R | 20817640..20817800 | 212..372 | 99 | <- | Minus |
3R | 20818709..20818917 | 1..211 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20816445..20817214 | 583..1355 | 98 | <- | Minus |
3R | 20817309..20817427 | 464..582 | 99 | <- | Minus |
3R | 20817495..20817585 | 373..463 | 100 | <- | Minus |
3R | 20817640..20817800 | 212..372 | 99 | <- | Minus |
3R | 20818709..20818917 | 1..211 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20816445..20817214 | 583..1355 | 98 | <- | Minus |
3R | 20817309..20817427 | 464..582 | 99 | <- | Minus |
3R | 20817495..20817585 | 373..463 | 100 | <- | Minus |
3R | 20817640..20817800 | 212..372 | 99 | <- | Minus |
3R | 20818709..20818917 | 1..211 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 16643362..16643522 | 212..372 | 99 | <- | Minus |
arm_3R | 16642167..16642936 | 583..1355 | 98 | <- | Minus |
arm_3R | 16643031..16643149 | 464..582 | 99 | <- | Minus |
arm_3R | 16643217..16643307 | 373..463 | 100 | <- | Minus |
arm_3R | 16644431..16644639 | 1..211 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20557276..20558045 | 583..1355 | 98 | <- | Minus |
3R | 20558140..20558258 | 464..582 | 99 | <- | Minus |
3R | 20558326..20558416 | 373..463 | 100 | <- | Minus |
3R | 20558471..20558631 | 212..372 | 99 | <- | Minus |
3R | 20559540..20559748 | 1..211 | 98 | Minus |
Translation from 209 to 718
> GM10285.hyp MAAMQSGGRPRERLLYAFRGWIAFVAFMDLGTAFRSYIERRSFLGDHSDT QFIEGDYTISRIIGMYCLLKAIALVHCTLYIHYKPVVSMGGCSLALTMVF YATEALYFRSSTINFYVIFPCVLNSITLLGLIYIPKRLRLWEPNMDLDDE NSQLLKQMTGFKRRRAKKQ*
Translation from 209 to 718
> GM10285.pep MAAMQSGGRPRERLLYAFRGWIAFVAFMDLGTAFRSYIERRSFLGDHSDT QFIEGDYTISRIIGMYCLLKAIALVHCTLYIHYKPVVSMGGCSLALTMVF YATEALYFRSSTINFYVIFPCVLNSITLLGLIYIPKRLRLWEPNMDLDDE NSQLLKQMTGFKRRRAKKQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18311-PA | 215 | GF18311-PA | 47..215 | 2..169 | 875 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15136-PA | 197 | GG15136-PA | 30..197 | 2..169 | 899 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15972-PA | 166 | GH15972-PA | 1..166 | 4..169 | 867 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17270-PB | 169 | CG17270-PB | 1..169 | 1..169 | 882 | 100 | Plus |
CG17270-PA | 169 | CG17270-PA | 1..169 | 1..169 | 882 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22156-PA | 174 | GI22156-PA | 7..174 | 2..169 | 879 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27126-PA | 166 | GL27126-PA | 1..166 | 4..169 | 867 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14428-PB | 172 | GA14428-PB | 5..172 | 2..169 | 876 | 96.4 | Plus |
Dpse\GA14428-PA | 166 | GA14428-PA | 1..166 | 4..169 | 867 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23158-PA | 169 | GM23158-PA | 1..169 | 1..169 | 904 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20033-PA | 169 | GD20033-PA | 1..169 | 1..169 | 904 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24275-PA | 167 | GJ24275-PA | 1..167 | 4..169 | 846 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22697-PA | 167 | GK22697-PA | 3..166 | 5..168 | 840 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25039-PA | 166 | GE25039-PA | 1..166 | 4..169 | 881 | 98.8 | Plus |